mRNA_M-pyrifera_M_contig84425.19688.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig84425.19688.1 vs. uniprot
Match: A0A7S1SZG7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SZG7_9CHLO) HSP 1 Score: 167 bits (424), Expect = 1.270e-49 Identity = 94/146 (64.38%), Postives = 113/146 (77.40%), Query Frame = 1 Query: 13 MHVNVGVVGHVDSGKTSLVRALSTTLSTAALDKHPESKRRGITLDLGFSAFSMKLGE-------DSVDVTLVDCPGHASLLRTIVGGASIVDFALIVIDATKGIQAQTAEAIVVAELVTSDAVVVLNKVD---LATPEK-IEKTRK 417 +++NVGV+GHVDSGKTSLVRALST LSTAALDKHP+SK RGITLDLGFS+F + L E D + TLVDCPGHASL+RTI+GGA I+D ++V+D TKGIQAQTAE IVV EL T +V LNK+D +AT +K I K +K Sbjct: 61 LNINVGVLGHVDSGKTSLVRALSTQLSTAALDKHPQSKERGITLDLGFSSFMVPLPERLQHLPYDQLQFTLVDCPGHASLIRTILGGAQIIDMMVLVVDVTKGIQAQTAECIVVGELTTDYLIVALNKIDQLPVATRDKQIHKAKK 206
BLAST of mRNA_M-pyrifera_M_contig84425.19688.1 vs. uniprot
Match: A0A7S2RBF0_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RBF0_9STRA) HSP 1 Score: 174 bits (440), Expect = 7.360e-49 Identity = 92/141 (65.25%), Postives = 110/141 (78.01%), Query Frame = 1 Query: 13 MHVNVGVVGHVDSGKTSLVRALSTTLSTAALDKHPESKRRGITLDLGFSAFSMKLGE----------DSVDVTLVDCPGHASLLRTIVGGASIVDFALIVIDATKGIQAQTAEAIVVAELVTSDAVVVLNKVDLATPEKIE 405 ++VN+G++GHVDSGKTSLVRALST LSTAALDKHP+SK RGITLDLGFSAF L E D + TLVDCPGHASL+RTI+GGA I+D L+V+D TKGIQ QTAE +V+ E++T+D VVVLNK+DL EK E Sbjct: 20 INVNIGILGHVDSGKTSLVRALSTMLSTAALDKHPQSKERGITLDLGFSAFITPLPEHLNKDGAGLSDKIQYTLVDCPGHASLIRTIIGGAQIIDRMLLVVDVTKGIQTQTAECLVIGEILTNDLVVVLNKIDLIPDEKRE 160
BLAST of mRNA_M-pyrifera_M_contig84425.19688.1 vs. uniprot
Match: A0A8J4FTB8_9CHLO (Tr-type G domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4FTB8_9CHLO) HSP 1 Score: 164 bits (415), Expect = 2.180e-48 Identity = 87/137 (63.50%), Postives = 105/137 (76.64%), Query Frame = 1 Query: 4 KPEMHVNVGVVGHVDSGKTSLVRALSTTLSTAALDKHPESKRRGITLDLGFSAFSMKLGE-------DSVDVTLVDCPGHASLLRTIVGGASIVDFALIVIDATKGIQAQTAEAIVVAELVTSDAVVVLNKVDLATP 393 K ++VNVG++GHVDSGKTSLV ALST LSTAALDKHP+SK RGITLDLGFSAF++ + E D + TLVDCPGHASL+RTI+GG I+D ++VID TKG+Q QTAE +VV E+ TS VV LNK+D P Sbjct: 3 KRVLNVNVGILGHVDSGKTSLVAALSTRLSTAALDKHPQSKERGITLDLGFSAFTLPMPEHMAHLPYDELQFTLVDCPGHASLIRTIIGGIQIIDMMVLVIDITKGLQTQTAECLVVGEVATSRMVVALNKIDQLYP 139
BLAST of mRNA_M-pyrifera_M_contig84425.19688.1 vs. uniprot
Match: A0A2V0NPL3_9CHLO (Selenocysteine-specific elongation factor n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NPL3_9CHLO) HSP 1 Score: 172 bits (435), Expect = 6.880e-48 Identity = 91/135 (67.41%), Postives = 109/135 (80.74%), Query Frame = 1 Query: 13 MHVNVGVVGHVDSGKTSLVRALSTTLSTAALDKHPESKRRGITLDLGFSAFSMKLGE-------DSVDVTLVDCPGHASLLRTIVGGASIVDFALIVIDATKGIQAQTAEAIVVAELVTSDAVVVLNKVDLATPE 396 ++VN+GV+GHVDSGKTSLV ALS+TLSTAALDKHP+S+ RGITLDLGFSAFS L E +++ +TLVDCPGHASL+RTIVGGA I+D L+V+D TKG+QAQTAE +VVAE+ VV LNKVDL PE Sbjct: 11 LNVNIGVMGHVDSGKTSLVAALSSTLSTAALDKHPQSRERGITLDLGFSAFSAPLPERLGGLPFEALQITLVDCPGHASLIRTIVGGARIIDAVLLVVDITKGLQAQTAECLVVAEMAAQRLVVALNKVDLLPPE 145
BLAST of mRNA_M-pyrifera_M_contig84425.19688.1 vs. uniprot
Match: A0A7S0CTB3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CTB3_9EUKA) HSP 1 Score: 160 bits (406), Expect = 8.900e-48 Identity = 84/148 (56.76%), Postives = 112/148 (75.68%), Query Frame = 1 Query: 13 MHVNVGVVGHVDSGKTSLVRALSTTLSTAALDKHPESKRRGITLDLGFSAFSMKLGED---------SVDVTLVDCPGHASLLRTIVGGASIVDFALIVIDATKGIQAQTAEAIVVAELVTSDAVVVLNKVDLATP----EKIEKTRK 417 ++VNVGV+GHVDSGKTSLV+ALST LSTAALDKHP+S++RGITLDLGFSAF++ + ED + TLVDCPGHASL++T++GGA+I+D ++VID KGIQ QTAE +++ E+++ ++ LNK DL EKI K +K Sbjct: 20 LNVNVGVLGHVDSGKTSLVKALSTELSTAALDKHPDSRKRGITLDLGFSAFTIDVPEDRKEEFKGYEKIQFTLVDCPGHASLIKTVIGGAAIIDLMILVIDINKGIQTQTAECLIIGEILSDYMIIALNKADLIPKAKRAEKIAKMKK 167
BLAST of mRNA_M-pyrifera_M_contig84425.19688.1 vs. uniprot
Match: A0A2R5G8P6_9STRA (Selenocysteine-specific elongation factor n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G8P6_9STRA) HSP 1 Score: 170 bits (431), Expect = 1.460e-47 Identity = 88/131 (67.18%), Postives = 107/131 (81.68%), Query Frame = 1 Query: 13 MHVNVGVVGHVDSGKTSLVRALSTTLSTAALDKHPESKRRGITLDLGFSAFSMKLGEDSVDV-------TLVDCPGHASLLRTIVGGASIVDFALIVIDATKGIQAQTAEAIVVAELVTSDAVVVLNKVDL 384 ++VNVGV+GHVDSGKTSLVRALST LSTAALDKHP+SK RGITLDLGFSAF+++ E D TLVDCPGHASL+RTI+GGA I+D ++V+D TKGIQ QTAE +V+ E++T D +VVLNK+DL Sbjct: 8 VNVNVGVLGHVDSGKTSLVRALSTMLSTAALDKHPQSKERGITLDLGFSAFTVEAPEQLADTGVKQVQYTLVDCPGHASLIRTIIGGAQIIDRMILVVDVTKGIQTQTAECLVIGEILTDDLIVVLNKIDL 138
BLAST of mRNA_M-pyrifera_M_contig84425.19688.1 vs. uniprot
Match: A0A140JWV9_GONPE (Eukaryotic elongation factor, selenocysteine-tRNA-specific n=3 Tax=Gonium pectorale TaxID=33097 RepID=A0A140JWV9_GONPE) HSP 1 Score: 169 bits (427), Expect = 5.760e-47 Identity = 89/139 (64.03%), Postives = 107/139 (76.98%), Query Frame = 1 Query: 1 LKPEMHVNVGVVGHVDSGKTSLVRALSTTLSTAALDKHPESKRRGITLDLGFSAFSMKLGE-------DSVDVTLVDCPGHASLLRTIVGGASIVDFALIVIDATKGIQAQTAEAIVVAELVTSDAVVVLNKVDLATPE 396 +K +++NVGV+GHVDSGKTSLV ALST LSTAALDKHP+SK RGITLDLGFSAF++ L D + TLVDCPGHASL+RTI+GG I+D ++V+D TKG+Q QTAE +VV E+ TS VV LNKVDL PE Sbjct: 1 MKRVLNINVGVLGHVDSGKTSLVAALSTQLSTAALDKHPQSKERGITLDLGFSAFTVPLPPHLSHLPYDELQFTLVDCPGHASLIRTIIGGVQIIDMMVLVVDVTKGLQTQTAECLVVGEVATSRMVVALNKVDLLQPE 139
BLAST of mRNA_M-pyrifera_M_contig84425.19688.1 vs. uniprot
Match: D9CJ23_VOLCA (SelEFf n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D9CJ23_VOLCA) HSP 1 Score: 168 bits (426), Expect = 6.900e-47 Identity = 88/135 (65.19%), Postives = 108/135 (80.00%), Query Frame = 1 Query: 13 MHVNVGVVGHVDSGKTSLVRALSTTLSTAALDKHPESKRRGITLDLGFSAFSMKLGE-------DSVDVTLVDCPGHASLLRTIVGGASIVDFALIVIDATKGIQAQTAEAIVVAELVTSDAVVVLNKVDLATPE 396 +++NVGV+GH+DSGKTSLV ALST LSTAALDKHP+SK RGITLDLGFSAF++ + E D + TLVDCPGHASL+RT++GGA I+D ++VID TKG+QAQTAE +VV E+ TS VV LNKVDL P+ Sbjct: 6 LNMNVGVLGHIDSGKTSLVGALSTCLSTAALDKHPQSKERGITLDLGFSAFTVPIPEHLAHVPYDELQFTLVDCPGHASLIRTVIGGAQIIDMMVLVIDITKGLQAQTAECLVVGEVATSRMVVALNKVDLLHPD 140
BLAST of mRNA_M-pyrifera_M_contig84425.19688.1 vs. uniprot
Match: M2W4E6_GALSU (Selenocysteine-specific elongation factor-like protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W4E6_GALSU) HSP 1 Score: 167 bits (423), Expect = 1.250e-46 Identity = 87/142 (61.27%), Postives = 114/142 (80.28%), Query Frame = 1 Query: 4 KPEMHVNVGVVGHVDSGKTSLVRALSTTLSTAALDKHPESKRRGITLDLGFSAFSMKLGEDS----VDVTLVDCPGHASLLRTIVGGASIVDFALIVIDATKGIQAQTAEAIVVAELVTSDAVVVLNKVDLATPEKIEKTRK 417 K +++N+GV+GHVDSGKTSLVR++ST LSTAALDKHP+S RGITLDLGFSAF ++ ++ V +TLVDCPGHASLL+T++GG+ I+D L+VID TKGIQ QT+E IVV ELVT A++V +K+DL P+ E+T+K Sbjct: 3 KNTININIGVLGHVDSGKTSLVRSISTILSTAALDKHPQSSERGITLDLGFSAFMLQKDKEETSEQVQITLVDCPGHASLLKTVLGGSKIIDALLLVIDVTKGIQMQTSECIVVGELVTDKAIIVFSKIDLIPPD--ERTQK 142
BLAST of mRNA_M-pyrifera_M_contig84425.19688.1 vs. uniprot
Match: A0A7S0RQL8_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RQL8_9CHLO) HSP 1 Score: 166 bits (421), Expect = 2.160e-46 Identity = 90/146 (61.64%), Postives = 110/146 (75.34%), Query Frame = 1 Query: 16 HVNVGVVGHVDSGKTSLVRALSTTLSTAALDKHPESKRRGITLDLGFSAFSM--------KLGEDSVDVTLVDCPGHASLLRTIVGGASIVDFALIVIDATKGIQAQTAEAIVVAELVTSDAVVVLNKVDL----ATPEKIEKTRK 417 +VNVG++GHVDSGKTSL RALST LSTA+LDKHP+S RGITLDLGFS F++ L D+V TLVDCPGHASL+RTI+GGA I+D ++V+D TKGIQ QTAE +VV E++T +VVLNKVD+ EKIEK +K Sbjct: 7 NVNVGILGHVDSGKTSLARALSTLLSTASLDKHPQSSERGITLDLGFSGFTVPTPDNLKESLKHDNVQFTLVDCPGHASLIRTIIGGAQIIDLMMLVVDVTKGIQTQTAECLVVGEILTQHMLVVLNKVDMLPEATRDEKIEKMKK 152 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84425.19688.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig84425.19688.1 >prot_M-pyrifera_M_contig84425.19688.1 ID=prot_M-pyrifera_M_contig84425.19688.1|Name=mRNA_M-pyrifera_M_contig84425.19688.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=135bp MHVNVGVVGHVDSGKTSLVRALSTTLSTAALDKHPESKRRGITLDLGFSAback to top mRNA from alignment at M-pyrifera_M_contig84425:460..876+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig84425.19688.1 ID=mRNA_M-pyrifera_M_contig84425.19688.1|Name=mRNA_M-pyrifera_M_contig84425.19688.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=417bp|location=Sequence derived from alignment at M-pyrifera_M_contig84425:460..876+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig84425:460..876+ >mRNA_M-pyrifera_M_contig84425.19688.1 ID=mRNA_M-pyrifera_M_contig84425.19688.1|Name=mRNA_M-pyrifera_M_contig84425.19688.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=810bp|location=Sequence derived from alignment at M-pyrifera_M_contig84425:460..876+ (Macrocystis pyrifera P11B4 male)back to top |