mRNA_M-pyrifera_M_contig83357.19466.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig83357.19466.1 vs. uniprot
Match: A0A8J5XDG9_DIALT (FtsJ domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XDG9_DIALT) HSP 1 Score: 75.1 bits (183), Expect = 4.480e-13 Identity = 55/153 (35.95%), Postives = 71/153 (46.41%), Query Frame = 1 Query: 1 IDLHPKRFRHVLTFIYESDAGKMTCSVSPSELFYNFDLRSARDASGTGVCRASFKLSETV-----------------HRLSHGRSEGEGSSVPALDLTKIDRALDIGAAPGGWTAVLVALGVGEVIAIDPGMLDDDVLAMPGVKHMIMRVETA 408 + L PKR RH G + V P+E + DL S + T RA +KL E + +EG G +V A L + RA+D+GAAPGGWT+ L+ G V A+DP LD VL +PGV HM MR E A Sbjct: 271 VRLEPKRGRHTHVVALAWANGPLAWGVEPAEAYGFKDLDSFLADAATS--RAYYKLREALVMHFGAAAXXXXXXXXXXXXXXXPAEGAGRAV-APPLLRGLRAVDVGAAPGGWTSCLIEHGAAHVTAVDPAELDAQVLVLPGVAHMRMRAEEA 420
BLAST of mRNA_M-pyrifera_M_contig83357.19466.1 vs. uniprot
Match: A0A316DCD2_9BACL (23S rRNA (Cytidine2498-2'-O)-methyltransferase n=1 Tax=Tumebacillus permanentifrigoris TaxID=378543 RepID=A0A316DCD2_9BACL) HSP 1 Score: 62.4 bits (150), Expect = 1.020e-8 Identity = 34/81 (41.98%), Postives = 48/81 (59.26%), Query Frame = 1 Query: 145 VCRASFKLSETVHRLSHGRSEGEGSSVPALDLTKIDRALDIGAAPGGWTAVLVALGVGEVIAIDPGMLDDDVLAMPGVKHM 387 + RA FKL E R LDL +RALDIGAAPGGW+++L+ G+ +V A+DPG + D+L+ P +KH+ Sbjct: 182 ISRAVFKLLEAEERF-------------GLDLASFERALDIGAAPGGWSSLLLKRGL-QVTAVDPGEMHADLLSNPNLKHL 248
BLAST of mRNA_M-pyrifera_M_contig83357.19466.1 vs. uniprot
Match: A0A7S0J109_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J109_9EUKA) HSP 1 Score: 62.4 bits (150), Expect = 1.030e-8 Identity = 39/90 (43.33%), Postives = 49/90 (54.44%), Query Frame = 1 Query: 145 VCRASFKLSETVHRLSHGRSEGEGSSVPALDLTKIDRALDIGAAPGGWTAVLVALGVGEVIAIDPGMLDDDVLAMPGVKHMIMRVETATP 414 VCRA+ K+ E R R G S+ A+D+GAAPGGWT+ L G EVIAIDPG L + P VKHM M+++ A P Sbjct: 195 VCRAAHKIREVAARELL-RPLGASST-----------AIDVGAAPGGWTSYLADAGCAEVIAIDPGELRLGQVPRPAVKHMRMKLQDALP 272
BLAST of mRNA_M-pyrifera_M_contig83357.19466.1 vs. uniprot
Match: A0A835XVX0_9CHLO (FtsJ domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XVX0_9CHLO) HSP 1 Score: 60.5 bits (145), Expect = 5.830e-8 Identity = 40/119 (33.61%), Postives = 61/119 (51.26%), Query Frame = 1 Query: 55 DAGKMTCSVSPSELFYNFDLRSARDASGTG-VCRASFKLSETVHRLSHGRSEGEGSSVPALDLTKIDRALDIGAAPGGWTAVLVALGVGEVIAIDPGMLDDDVLAMPGVKHMIMRVETA 408 + + + ++P++ Y + S RD G +CRA+ KL E + + G P L A+D+GAAPGGWT +L A G V++IDP +D V A+P V H+ R + A Sbjct: 413 EVAQYSYGLAPADWQYQYG--SDRDKKMPGQLCRAASKLREALICCT-----GSAELRPGL------AAVDVGAAPGGWTQMLAAAGARLVVSIDPAQMDPGVAALPNVTHLQCRCDEA 518
BLAST of mRNA_M-pyrifera_M_contig83357.19466.1 vs. uniprot
Match: U5QKS4_9CYAN (RNA 2'-O-ribose methyltransferase n=1 Tax=Gloeobacter kilaueensis JS1 TaxID=1183438 RepID=U5QKS4_9CYAN) HSP 1 Score: 59.7 bits (143), Expect = 9.820e-8 Identity = 37/88 (42.05%), Postives = 48/88 (54.55%), Query Frame = 1 Query: 145 VCRASFKLSETVHRLSHGRSEGEGSSVPALDLTKIDRALDIGAAPGGWTAVLVALGVGEVIAIDPGMLDDDVLAMPGVKHMIMRVETA 408 + RA+FKL E R LDL + RALDIGAAPGGWTA+L+ G+ EV AIDP L +L P ++++ TA Sbjct: 186 ISRAAFKLLEAEERF-------------RLDLGRFRRALDIGAAPGGWTALLLDRGL-EVTAIDPAALHPTLLGHPRLRYLATSAATA 259
BLAST of mRNA_M-pyrifera_M_contig83357.19466.1 vs. uniprot
Match: A0A7U6KH23_9FIRM (LSU rRNA 2'-O-methyl-C2498 methyltransferase RlmM n=1 Tax=Lachnospiraceae bacterium KM106-2 TaxID=2093742 RepID=A0A7U6KH23_9FIRM) HSP 1 Score: 58.2 bits (139), Expect = 3.170e-7 Identity = 40/125 (32.00%), Postives = 60/125 (48.00%), Query Frame = 1 Query: 28 HVLTFIYESDAGKMTCSVSPSELFYNFDLRSARDASGTGVCRASFKLSETVHRLSHGRSEGEGSSVPALDLTKIDRALDIGAAPGGWTAVLVALGVGEVIAIDPGMLDDDVLAMPGVKHMIMRVE 402 HV++ + + + S++ L + + + +CRA KL E + + R EGEG+ ALD+GAAPGGWT VL G +V A+DPG LD+ + + H RVE Sbjct: 144 HVISVVVKDKICYLGYSLAEDNLNFQCNEYRVLASEPIQICRAENKLKEAICKF-QVRLEGEGN------------ALDVGAAPGGWTKVLADYGY-QVSAVDPGKLDERLNTYSNITHYRDRVE 254
BLAST of mRNA_M-pyrifera_M_contig83357.19466.1 vs. uniprot
Match: L8GJZ6_ACACA (Ribosomal RNA large subunit methyltransferase J, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GJZ6_ACACA) HSP 1 Score: 58.2 bits (139), Expect = 3.460e-7 Identity = 47/134 (35.07%), Postives = 66/134 (49.25%), Query Frame = 1 Query: 1 IDLHPKRFRHVLTFIYESDAGKMTCSVSPSELFYNFDLRSARDASGTGVCRASFKLSETVHRLSHGRSEGEGSSVPALDLTKIDRALDIGAAPGGWTAVLVALGVGEVIAIDPGMLDDDVLAMPGVKHMIMRVE 402 + LHPK+F HVL+ E G+ ++P ELF+ + V RA K+ E R+ R L T A+D+GAAPGGWT L L + +VI+IDPG L ++ P V H+ +VE Sbjct: 207 VQLHPKQFTHVLSIARER--GRYYYGLAPKELFWGPES-GVHSVQMDKVSRAYHKMKEVFTRIDCLR----------LADTAQWTAIDVGAAPGGWTQYLSPL-MKQVISIDPGELRIEL--PPNVVHLKKKVE 324
BLAST of mRNA_M-pyrifera_M_contig83357.19466.1 vs. uniprot
Match: A0A074LNG5_9BACL (SAM-dependent methyltransferase n=1 Tax=Tumebacillus flagellatus TaxID=1157490 RepID=A0A074LNG5_9BACL) HSP 1 Score: 57.4 bits (137), Expect = 5.900e-7 Identity = 32/81 (39.51%), Postives = 45/81 (55.56%), Query Frame = 1 Query: 145 VCRASFKLSETVHRLSHGRSEGEGSSVPALDLTKIDRALDIGAAPGGWTAVLVALGVGEVIAIDPGMLDDDVLAMPGVKHM 387 V RA FKL E R LD +RALDIGAAPGGW+++L+ G+ +V A+DPG +D ++ P + H+ Sbjct: 182 VSRAKFKLLEAEERF-------------GLDFASFERALDIGAAPGGWSSLLLERGL-QVTAVDPGHMDAELAKHPKLTHL 248
BLAST of mRNA_M-pyrifera_M_contig83357.19466.1 vs. uniprot
Match: A0A6U3T7A3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3T7A3_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 7.450e-7 Identity = 34/83 (40.96%), Postives = 46/83 (55.42%), Query Frame = 1 Query: 166 LSETVHRLSHGRSEGEGSSVPALDLTKIDR-ALDIGAAPGGWTAVLVA-LGVGEVIAIDPGMLDDDVLAMPGVKHMIMRVETA 408 +SE+V + G S + K R ALD GAAPGGWT VL+ L VIA+DP LDD+V ++ GV+H ++ A Sbjct: 64 VSESVSATDKNSDDASGGSGLLCHMLKGSRVALDCGAAPGGWTQVLLKELDASVVIAVDPAELDDEVASLAGVEHWKCGIDEA 146
BLAST of mRNA_M-pyrifera_M_contig83357.19466.1 vs. uniprot
Match: A0A3B0CD55_9BACL (Methyltransferase domain-containing protein n=1 Tax=Paenibacillus ginsengarvi TaxID=400777 RepID=A0A3B0CD55_9BACL) HSP 1 Score: 57.0 bits (136), Expect = 8.140e-7 Identity = 35/81 (43.21%), Postives = 45/81 (55.56%), Query Frame = 1 Query: 145 VCRASFKLSETVHRLSHGRSEGEGSSVPALDLTKIDRALDIGAAPGGWTAVLVALGVGEVIAIDPGMLDDDVLAMPGVKHM 387 V RA FKL E + LDL++ +ALDIGAAPGGWT++L+ GV EV A+DP L D+L P + M Sbjct: 188 VSRAKFKLLEAEYEF-------------GLDLSRYAKALDIGAAPGGWTSLLLERGV-EVTAVDPADLHPDLLGHPKLTFM 254 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83357.19466.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig83357.19466.1 >prot_M-pyrifera_M_contig83357.19466.1 ID=prot_M-pyrifera_M_contig83357.19466.1|Name=mRNA_M-pyrifera_M_contig83357.19466.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=139bp IDLHPKRFRHVLTFIYESDAGKMTCSVSPSELFYNFDLRSARDASGTGVCback to top mRNA from alignment at M-pyrifera_M_contig83357:415..831+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig83357.19466.1 ID=mRNA_M-pyrifera_M_contig83357.19466.1|Name=mRNA_M-pyrifera_M_contig83357.19466.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=417bp|location=Sequence derived from alignment at M-pyrifera_M_contig83357:415..831+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig83357:415..831+ >mRNA_M-pyrifera_M_contig83357.19466.1 ID=mRNA_M-pyrifera_M_contig83357.19466.1|Name=mRNA_M-pyrifera_M_contig83357.19466.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=834bp|location=Sequence derived from alignment at M-pyrifera_M_contig83357:415..831+ (Macrocystis pyrifera P11B4 male)back to top |