mRNA_M-pyrifera_M_contig8322.19435.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8322.19435.1 vs. uniprot
Match: D8LER4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LER4_ECTSI) HSP 1 Score: 332 bits (852), Expect = 5.090e-114 Identity = 170/208 (81.73%), Postives = 177/208 (85.10%), Query Frame = 1 Query: 1 VLAAAHAEPANALSFPTWMVHVSSLIEWLAAMTYVWRFADVSGLNEWKGLTWGMLPLHTSGLIACTYHIFYNSPELISLVAMQAGLTCFGNATMAFATWRVWQAGKQAWKGDEVEEAEAAAEAAAVASADGETSSSPLSGSDASFYAQILGITVVGAGLVKWGELLVDFPFEPSYVAAAALILGPTALNAKKWADRSADPSAPIKGII 624 +LAAAH EP NALSFPTWMVHVSSLIEWLAAMTYVWRFADVSGL EWKGLTWGMLPLHTSGLIACTYHIFYN+PELISLVAMQAGLTCFGNATMAFATWRVWQAGKQ W+GDEVEEA GE SSS G D FY Q+L ITVVGA LVKWGEL +DFPF+PSY AAAALILGPTALNAKKWADRS DPSA I+GII Sbjct: 2 MLAAAHTEPGNALSFPTWMVHVSSLIEWLAAMTYVWRFADVSGLKEWKGLTWGMLPLHTSGLIACTYHIFYNAPELISLVAMQAGLTCFGNATMAFATWRVWQAGKQEWRGDEVEEAXXXXXXXXXXXX-GEASSSL--GDDVPFYGQVLAITVVGAALVKWGELYLDFPFQPSYAAAAALILGPTALNAKKWADRSKDPSAAIEGII 206
BLAST of mRNA_M-pyrifera_M_contig8322.19435.1 vs. uniprot
Match: A0A6H5KGT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGT7_9PHAE) HSP 1 Score: 337 bits (863), Expect = 7.310e-112 Identity = 171/206 (83.01%), Postives = 176/206 (85.44%), Query Frame = 1 Query: 7 AAAHAEPANALSFPTWMVHVSSLIEWLAAMTYVWRFADVSGLNEWKGLTWGMLPLHTSGLIACTYHIFYNSPELISLVAMQAGLTCFGNATMAFATWRVWQAGKQAWKGDEVEEAEAAAEAAAVASADGETSSSPLSGSDASFYAQILGITVVGAGLVKWGELLVDFPFEPSYVAAAALILGPTALNAKKWADRSADPSAPIKGII 624 AAAHAEP NALSFPTWMVHVSSLIEWLAAMTYVWRFADVSGL EWKGLTWGMLPLHTSGLIACTYHIFYN+PELISLVAMQAGLTCFGNATMAFATWRVWQAGKQ W+GDEVEEAE GE SSS D FY Q+L ITVVGA LVKWGEL +DFPFEPSY AAAALILGPTALNAKKWADRS DPSA I+GII Sbjct: 269 AAAHAEPGNALSFPTWMVHVSSLIEWLAAMTYVWRFADVSGLKEWKGLTWGMLPLHTSGLIACTYHIFYNAPELISLVAMQAGLTCFGNATMAFATWRVWQAGKQEWRGDEVEEAEXXXXXXXXXXRKGEASSSLRD--DVPFYGQLLAITVVGAALVKWGELYLDFPFEPSYAAAAALILGPTALNAKKWADRSKDPSAAIEGII 472
BLAST of mRNA_M-pyrifera_M_contig8322.19435.1 vs. uniprot
Match: A0A835YN17_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN17_9STRA) HSP 1 Score: 268 bits (684), Expect = 2.260e-88 Identity = 132/208 (63.46%), Postives = 157/208 (75.48%), Query Frame = 1 Query: 1 VLAAAHAEPANALSFPTWMVHVSSLIEWLAAMTYVWRFADVSGLNEWKGLTWGMLPLHTSGLIACTYHIFYNSPELISLVAMQAGLTCFGNATMAFATWRVWQAGKQAWKGDEVEEAEAAAEAAAVASADGETSSSPLSGSDASFYAQILGITVVGAGLVKWGELLVDFPFEPSYVAAAALILGPTALNAKKWADRSADPSAPIKGII 624 +L A H EPANALS+PTWMVHVSS+IEWL AM Y+WR+A VSGL +WKGLTWGMLPLHTSGL ACTYHI YNSP+++ LVA+QAGLTCFGNATMA AT+R+WQAGK GD +A +AD P +DA+FY Q++ +TV+GA LVKWGELLVDFPFEPSY AAAALI GPTA+N KW +RS P + + G+ Sbjct: 21 MLVALHPEPANALSWPTWMVHVSSIIEWLVAMAYIWRYAAVSGLQQWKGLTWGMLPLHTSGLCACTYHILYNSPDVVGLVALQAGLTCFGNATMAAATYRIWQAGKA---GD--------LQAGESVTAD------PSEANDATFYGQLVAMTVIGAALVKWGELLVDFPFEPSYAAAAALIFGPTAVNVYKWYERSQKPDSAVTGLF 211
BLAST of mRNA_M-pyrifera_M_contig8322.19435.1 vs. uniprot
Match: R7Q950_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q950_CHOCR) HSP 1 Score: 189 bits (479), Expect = 4.750e-55 Identity = 95/207 (45.89%), Postives = 135/207 (65.22%), Query Frame = 1 Query: 4 LAAAHAEPANALSFPTWMVHVSSLIEWLAAMTYVWRFADVSGLNEWKGLTWGMLPLHTSGLIACTYHIFYNSPELISLVAMQAGLTCFGNATMAFATWRVWQAGKQAWKGDEVEEAEAAAEAAAVASADGETSSSPLSGSDASFYAQILGITVVGAGLVKWGELLVDFPFEPSYVAAAALILGPTALNAKKWADRSADPSAPIKGII 624 L + H EPANALSFPTW++HVSSL+EWL AM VW++A+V+ WKGLTWGMLPLHTSG+ ACTYH+FYN+P L LVA+QA LT FGN T+ A +R+ ++ K+ + +++ ++ + + + S+A F ++ GI+ VG+ LVKWG L +D PFEP+ + ++I+ PT LN KWA RS + G + Sbjct: 187 LGSLHVEPANALSFPTWVIHVSSLVEWLVAMGLVWKYAEVTDNPAWKGLTWGMLPLHTSGICACTYHLFYNAPSLNILVALQAALTFFGNGTLVAAAYRISRSEKKTMAAHKSVSSQSEKRNISLVGFE-DLAVQLQQDSNAKFLLKLFGISCVGSALVKWGSLAIDAPFEPTLALSLSIIVIPTVLNMAKWAVRSNKEMSDFGGFL 392
BLAST of mRNA_M-pyrifera_M_contig8322.19435.1 vs. uniprot
Match: K8F0D0_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8F0D0_9CHLO) HSP 1 Score: 189 bits (480), Expect = 6.180e-54 Identity = 97/210 (46.19%), Postives = 136/210 (64.76%), Query Frame = 1 Query: 1 VLAAAHAEPANALSFPTWMVHVSSLIEWLAAMTYVWRFADVSGLNEWKGLTWGMLPLHTSGLIACTYHIFYNSPELISLVAMQAGLTCFGNATMAFATWRVWQAGKQAW-KGDEVEEAEAAAEAAAVASADGETS-SSPLSGSDASFYAQILGITVVGAGLVKWGELLVDFPFEPSYVAAAALILGPTALNAKKWADRSADPSAPIKGII 624 + +A H EP NALS PTW++H SSLIEWL AM+ +W +ADV +KGLTWGM+ H SGL ACT+H+FYNSP L S+VA+QAGLTC GNATM A +R++Q GK+ D+ ++A+A + A + ++ +S L DA ++ ++ + + LVKWG L VDFPFEPS + A ++I+ PT LN W S DP+ ++ Sbjct: 317 IASAKHGEPGNALSLPTWVIHASSLIEWLVAMSLIWNYADVKKRPSYKGLTWGMVTSHASGLAACTFHVFYNSPALNSVVALQAGLTCIGNATMGIAAYRMYQEGKRLGISSDDADDADAVSVLAGTKALQTPSAGTSFLETDDAFLLLKLALVSTLVSALVKWGSLFVDFPFEPSVLLAYSMIVFPTILNMNAWKKLSDDPTKKADSLL 526
BLAST of mRNA_M-pyrifera_M_contig8322.19435.1 vs. uniprot
Match: A0A2V3IH42_9FLOR (Ycf49-like protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH42_9FLOR) HSP 1 Score: 184 bits (467), Expect = 6.400e-54 Identity = 97/196 (49.49%), Postives = 128/196 (65.31%), Query Frame = 1 Query: 1 VLAAAHAEPANALSFPTWMVHVSSLIEWLAAMTYVWRFADVSGLNEWKGLTWGMLPLHTSGLIACTYHIFYNSPELISLVAMQAGLTCFGNATMAFATWRVWQAGKQAWKGDEVEEAEAAAEAAAVASADGETSSSPLSGSDASFYAQILGITVVGAGLVKWGELLVDFPFEPSYVAAAALILGPTALNAKKWADR 588 +LA H EPANALSFPTW++HVSSL+EWL AM VW +++ S WKGLTWGM+PLHTSG+ ACTYH+FYN+P L LV +QA LT GN +MAFAT R+ G ++ GD+ ++ + AE++ + D TS + S+ ++ ++ +G+ VKWG LL D PF S A LI PTALN KWA R Sbjct: 142 LLATVHEEPANALSFPTWIIHVSSLVEWLVAMGLVWEYSERSRNERWKGLTWGMVPLHTSGICACTYHLFYNAPSLSVLVLLQAALTFVGNCSMAFATCRIGGQGDES--GDDADDDKVEAESSLMGFEDMGTSKN----SNLMLLGKVFALSAMGSAGVKWGSLLFDAPFSGSLPLALTLITVPTALNVVKWASR 331
BLAST of mRNA_M-pyrifera_M_contig8322.19435.1 vs. uniprot
Match: A0A7S4UM71_GUITH (Hypothetical protein n=3 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4UM71_GUITH) HSP 1 Score: 184 bits (468), Expect = 4.010e-53 Identity = 95/192 (49.48%), Postives = 122/192 (63.54%), Query Frame = 1 Query: 16 HAEPANALSFPTWMVHVSSLIEWLAAMTYVWRFADVSGLNEWKGLTWGMLPLHTSGLIACTYHIFYNSPELISLVAMQAGLTCFGNATMAFATWRVWQAGKQAWKGDEVEEAEAAAEAAAVASADGETSSSPLSGSDASFYAQILGITVVGAGLVKWGELLVDFPFEPSYVAAAALILGPTALNAKKWADRS 591 H EP+NALS PTWMVHVSSLIEWLAAM VWR+A+V+G WKGLTWGMLP H+SGL ACTYH+FYNSP + LVA+Q+ LT G+ T +A +R+++ K + E AE A DG + L S+ + ++ + + + VKWGELLVDFPF+P+Y A +I PT N W RS Sbjct: 228 HGEPSNALSLPTWMVHVSSLIEWLAAMGLVWRYAEVTGNPRWKGLTWGMLPFHSSGLCACTYHLFYNSPAVSGLVALQSALTVVGDFTCWYAAYRIYEYSKSG------QVKEVGAEGVAGERKDG----TALEDSEGEYLTKLFFLVLASSAAVKWGELLVDFPFDPNYTTALLIIFVPTLANIFTWFARS 409
BLAST of mRNA_M-pyrifera_M_contig8322.19435.1 vs. uniprot
Match: A0A7S1GS18_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GS18_HEMAN) HSP 1 Score: 177 bits (449), Expect = 4.940e-50 Identity = 100/198 (50.51%), Postives = 124/198 (62.63%), Query Frame = 1 Query: 10 AAHAEPANALSFPTWMVHVSSLIEWLAAMTYVWRFADVSGLNEWKGLTWGMLPLHTSGLIACTYHIFYNSPELISLVAMQAGLTCFGNATMAFATWRVWQAGKQAWKGDEVEEAEAAAEAAAVASADGETSSSPLSGSDASFYAQILGITVVGAGLVKWGELLVDFPFEPSYVAAAALILGPTALNAKKWADRSADPS 603 A H EPANALSFPTWMVH+SSLIEWLAAM VWR+++VSG WKGLTWGMLP H+SGL A TYH FYN+ + LVA+Q LT G+ T +AT+R++Q + G V A AA + A +S L S+ + + G+ V + VKWGEL +D PFEPS AAA ++ G TALN W RS S Sbjct: 248 ALHPEPANALSFPTWMVHISSLIEWLAAMGLVWRYSEVSGNPRWKGLTWGMLPFHSSGLCAVTYHFFYNAKAVEVLVAVQGALTVVGDLTCWYATYRIYQWACENPGG--VPLAPAAQSGGQLPPATRPRASGGLD-SEGKYLWSLFGLVAVLSAAVKWGELAIDLPFEPSVGAAAGIVGGLTALNVATWLQRSTSES 442
BLAST of mRNA_M-pyrifera_M_contig8322.19435.1 vs. uniprot
Match: A0A0G4G427_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G427_VITBC) HSP 1 Score: 172 bits (435), Expect = 2.310e-48 Identity = 103/234 (44.02%), Postives = 130/234 (55.56%), Query Frame = 1 Query: 1 VLAAAHAEPANALSFPTWMVHVSSLIEWLAAMTYVWRFADVSGLNEWKGLTWGMLPLHTSGLIACTYHIFYNSPELISLVAMQAGLTCFGNATMAFATWRVWQAGKQA-----------------WKGDEVEEAEAAAEAAAVA--SADGETSSSPLSG-----------SDASFYAQILGITVVGAGLVKWGELLVDFPFEPSYVAAAALILGPTALNAKKWADRSADPSAPI 612 V + AH EP NALS PTW +HVSSL+EWL AM +W++ADV WKGLTWGMLPLH+SG+ ACTYH FYN+ +L LV +QA LT G+ T A A WR+WQ+ K +A + A VA S G SPL G S+ SF ++ I+V + VK+GEL +D PF PS A A+I PT LN+ KWA RS + SA + Sbjct: 171 VFSDAHPEPWNALSLPTWAIHVSSLVEWLIAMGLIWQYADVRRNPAWKGLTWGMLPLHSSGICACTYHFFYNASQLDFLVGLQAFLTVVGDTTCALAAWRIWQSEKNLPTPATDTHPQXXXXXXXXXXXXXXQASRLPDGATVAQYSGGGAGGGSPLKGWEDLGELFGQDSNLSFGLKLAAISVAVSAAVKYGELYLDLPFSPSLTPALAIIGVPTLLNSVKWALRSRNSSADL 404
BLAST of mRNA_M-pyrifera_M_contig8322.19435.1 vs. uniprot
Match: A0A061R910_9CHLO (Uncharacterized protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R910_9CHLO) HSP 1 Score: 170 bits (431), Expect = 5.150e-48 Identity = 100/213 (46.95%), Postives = 126/213 (59.15%), Query Frame = 1 Query: 16 HAEPANALSFPTWMVHVSSLIEWLAAMTYVWRFADVSGLNEWKGLTWGMLPLHTSGLIACTYHIFYNSPELISLVAMQAGLTCFGNATMAFATWRVWQAGKQAWKGDEVEEAEAAAEAAAVASADGETSSSPL--------------------SGSDASFYAQILGITVVGAGLVKWGELLVDFPF-EPSYVAAAALILGPTALNAKKWADRS 591 HAEP+NALS PTW VH SS+IE+L AM VW++A+VSG WKGLTWGMLP H+ GL ACTYH+F+NSP L S+VA+QA LT GN T A A +R+WQ G Q +AE A +SA +S SP S SDA F A+I G +++ A ++K+GEL + FPF E + A I P+ LN KWA S Sbjct: 170 HAEPSNALSLPTWAVHTSSVIEYLVAMGLVWQYAEVSGNPRWKGLTWGMLPSHSGGLCACTYHLFFNSPALSSIVALQALLTTVGNTTCAIAAYRLWQYGSQR-----------SAEERATSSAGNGSSPSPTDASHAGTGQRGWEDLAEEYKSDSDAVFVAKIAGWSILLAAVIKYGELGLGFPFSEQPLLPALGCIAVPSLLNISKWASLS 371 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8322.19435.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8322.19435.1 >prot_M-pyrifera_M_contig8322.19435.1 ID=prot_M-pyrifera_M_contig8322.19435.1|Name=mRNA_M-pyrifera_M_contig8322.19435.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=209bp VLAAAHAEPANALSFPTWMVHVSSLIEWLAAMTYVWRFADVSGLNEWKGLback to top mRNA from alignment at M-pyrifera_M_contig8322:8381..11895- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8322.19435.1 ID=mRNA_M-pyrifera_M_contig8322.19435.1|Name=mRNA_M-pyrifera_M_contig8322.19435.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3515bp|location=Sequence derived from alignment at M-pyrifera_M_contig8322:8381..11895- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8322:8381..11895- >mRNA_M-pyrifera_M_contig8322.19435.1 ID=mRNA_M-pyrifera_M_contig8322.19435.1|Name=mRNA_M-pyrifera_M_contig8322.19435.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1254bp|location=Sequence derived from alignment at M-pyrifera_M_contig8322:8381..11895- (Macrocystis pyrifera P11B4 male)back to top |