mRNA_M-pyrifera_M_contig83124.19414.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig83124.19414.1 vs. uniprot
Match: L8HAW3_ACACA (Clu domain-containing protein (Fragment) n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HAW3_ACACA) HSP 1 Score: 100 bits (249), Expect = 2.150e-22 Identity = 52/110 (47.27%), Postives = 70/110 (63.64%), Query Frame = 1 Query: 1 RDWNVEFQRILEMPNGTPQERLERALRVRKFKGDFEEKALQHARTIIEEVHLPNLQKSIRSLDVGGQAGGEKYMADNIFFKFAIDSSNLYGGDEHAMKAASHELMGLRSY 330 R+WN EFQ +LE+P T +ERL+R + DF A + + II E LP ++I+ VGG AGG KY+ + IFFKFA+D +YG DE+AMKAA+H+L GL Y Sbjct: 653 RNWNEEFQSLLELPVVTEKERLKRYELIHNLAQDFSITAKLYGKIIIAEAFLPRKYQTIKPCVVGGLAGGPKYIYNGIFFKFAMDDLGIYGSDENAMKAAAHDLKGLMRY 762
BLAST of mRNA_M-pyrifera_M_contig83124.19414.1 vs. uniprot
Match: A0A2P6NDL7_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NDL7_9EUKA) HSP 1 Score: 100 bits (249), Expect = 2.180e-22 Identity = 49/110 (44.55%), Postives = 73/110 (66.36%), Query Frame = 1 Query: 1 RDWNVEFQRILEMPNGTPQERLERALRVRKFKGDFEEKALQHARTIIEEVHLPNLQKSIRSLDVGGQAGGEKYMADNIFFKFAIDSSNLYGGDEHAMKAASHELMGLRSY 330 R+WN EFQ+IL++P T +ER++R ++ + +FE ++ + + II E L QK+I+ + +GGQAGGEKY+ I +KFA D +YGGDE MK+AS+E GL Y Sbjct: 249 RNWNEEFQKILDLPQRTTEERVKRFEQISQLASEFERTSILYGKIIINEETLSIDQKTIKPISIGGQAGGEKYVHAGILYKFAKDWKGIYGGDEFCMKSASNEQKGLTRY 358
BLAST of mRNA_M-pyrifera_M_contig83124.19414.1 vs. uniprot
Match: L8GEL6_ACACA (Clu domain-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GEL6_ACACA) HSP 1 Score: 99.0 bits (245), Expect = 6.510e-22 Identity = 50/110 (45.45%), Postives = 71/110 (64.55%), Query Frame = 1 Query: 1 RDWNVEFQRILEMPNGTPQERLERALRVRKFKGDFEEKALQHARTIIEEVHLPNLQKSIRSLDVGGQAGGEKYMADNIFFKFAIDSSNLYGGDEHAMKAASHELMGLRSY 330 ++WN +FQ +L+MP E+ ++ + DF A + + II E+ LP +K+I+ + GGQAGGEKY+ IFFKFA+D +YGGDE+AMKAASH+L GL Y Sbjct: 328 KNWNTDFQHLLDMPPSA-----EKFTKLARLAHDFVFAAETYGKIIISELGLPVEKKTIKPVAAGGQAGGEKYIVQGIFFKFALDIFGIYGGDEYAMKAASHDLKGLIHY 432
BLAST of mRNA_M-pyrifera_M_contig83124.19414.1 vs. uniprot
Match: UPI0006449048 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006449048) HSP 1 Score: 97.1 bits (240), Expect = 3.540e-21 Identity = 49/110 (44.55%), Postives = 71/110 (64.55%), Query Frame = 1 Query: 1 RDWNVEFQRILEMPNGTPQERLERALRVRKFKGDFEEKALQHARTIIEEVHLPNLQKSIRSLDVGGQAGGEKYMADNIFFKFAIDSSNLYGGDEHAMKAASHELMGLRSY 330 R+W++EF + L+M + E L R+ ++K +F + A +H TII+E + + SI +DVGG AGG+K++ D IF+KFA D +YGGD +AMKAA HEL GL Y Sbjct: 377 RNWSLEFWKALQMEHNCGVENLMRSQTIQKIAEEFVQVATKHGITIIKERGMLSGSHSIPPIDVGGVAGGQKFLKDGIFYKFAFDVYGIYGGDAYAMKAAGHELKGLMGY 486
BLAST of mRNA_M-pyrifera_M_contig83124.19414.1 vs. uniprot
Match: A0A0L0DSU4_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DSU4_THETB) HSP 1 Score: 96.7 bits (239), Expect = 4.940e-21 Identity = 52/112 (46.43%), Postives = 70/112 (62.50%), Query Frame = 1 Query: 1 RDWNVEFQRILEMPNGTPQERLERALRVRKFKGDFEEKALQHARTIIEEVHLPN--LQKSIRSLDVGGQAGGEKYMADNIFFKFAIDSSNLYGGDEHAMKAASHELMGLRSY 330 RDWN EFQ +LE+P TP ERL RA R+ F E A AR I++E LP ++ + + + GG AGGEKY+ ++FFKFA DS +Y G + A+ AA EL GLR++ Sbjct: 4 RDWNAEFQTLLELPVATPHERLVRAARLYALTSTFAETAQAIARIIVDEAGLPQGAPRRILPATEAGGVAGGEKYVVASMFFKFATDSHGIYAGAQFAIAAAGLELEGLRAF 115
BLAST of mRNA_M-pyrifera_M_contig83124.19414.1 vs. uniprot
Match: A0A2P6N5R7_9EUKA (ABC transporter B family member 11-like n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N5R7_9EUKA) HSP 1 Score: 94.7 bits (234), Expect = 2.350e-20 Identity = 53/113 (46.90%), Postives = 67/113 (59.29%), Query Frame = 1 Query: 1 RDWNVEFQRILEMPNGTPQERLERALRVRKFKG---DFEEKALQHARTIIEEVHLPNLQKSIRSLDVGGQAGGEKYMADNIFFKFAIDSSNLYGGDEHAMKAASHELMGLRSY 330 RDWN E+Q IL+MP+ ++ RK K DF A + R II E LP ++IR + VGG AGGEK++ I FKF +D LY GD +AMKAASHEL GL+ Y Sbjct: 350 RDWNAEYQSILDMPDSK--------IKYRKLKSLATDFVYAAETYGRIIISEHCLPLSSRTIRPVTVGGLAGGEKFIVCGILFKFCVDFHGLYNGDHNAMKAASHELKGLQQY 454
BLAST of mRNA_M-pyrifera_M_contig83124.19414.1 vs. uniprot
Match: A0A7S4I1U1_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I1U1_9EUKA) HSP 1 Score: 94.4 bits (233), Expect = 3.070e-20 Identity = 52/107 (48.60%), Postives = 68/107 (63.55%), Query Frame = 1 Query: 1 RDWNVEFQRILEMPNGTPQERLERALRVRKFKGDFEEKALQHARTIIEEVHLPNLQKSIRSLDV-GGQAGGEKYMADNIFFKFAIDSSNLYGGDEHAMKAASHELMG 318 RDWN EF +LE P LERA ++RK + +F E A + II E ++ QK+++++ V G AGGEKY IFFKFA+D ++LYG DEHAMK A HEL G Sbjct: 231 RDWNKEFNEVLESPL------LERAEKLRKLEKEFVEVASIIGKIIISEKNVHPSQKTVKAISVDSGIAGGEKYQVKGIFFKFAVDKADLYGSDEHAMKVACHELKG 331
BLAST of mRNA_M-pyrifera_M_contig83124.19414.1 vs. uniprot
Match: A0A2P6N2S8_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N2S8_9EUKA) HSP 1 Score: 93.6 bits (231), Expect = 5.940e-20 Identity = 51/110 (46.36%), Postives = 66/110 (60.00%), Query Frame = 1 Query: 4 DWNVEFQRILEMPNGTPQERLERALRVRKFKGDFEEKALQHARTIIEEVHLPNLQKSIR-SLDVGGQAGGEKYMADNIFFKFAIDSSNLYGGDEHAMKAASHELMGLRSY 330 DWN EFQ+IL +P T E+L + + DF A + II E +L ++I + +VGG AGGEKY+ I FKFAID NLYGGD +AMKAA+HEL + Y Sbjct: 170 DWNDEFQKILALPENTEDEKLHKYSELSSLNKDFVHIAKTFGKIIISERYLHAKHRTINPTTEVGGVAGGEKYVYHGILFKFAIDWRNLYGGDHNAMKAANHELQAVTRY 279
BLAST of mRNA_M-pyrifera_M_contig83124.19414.1 vs. uniprot
Match: L8HFE9_ACACA (Leucine-rich repeat-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HFE9_ACACA) HSP 1 Score: 89.4 bits (220), Expect = 1.160e-19 Identity = 44/81 (54.32%), Postives = 55/81 (67.90%), Query Frame = 1 Query: 88 KFKGDFEEKALQHARTIIEEVHLPNLQKSIRSLDVGGQAGGEKYMADNIFFKFAIDSSNLYGGDEHAMKAASHELMGLRSY 330 K DF A + + II E+ LP +K+I+ + VGGQAGGEKY+ IFFKFA+D +YGGDE AMKAASH+L GL Y Sbjct: 20 KLAHDFVFAAETYGKIIISELSLPEPKKTIKPMAVGGQAGGEKYIVQGIFFKFALDLYGIYGGDEFAMKAASHDLKGLTHY 100
BLAST of mRNA_M-pyrifera_M_contig83124.19414.1 vs. uniprot
Match: L8H7K1_ACACA (Clu domain-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H7K1_ACACA) HSP 1 Score: 92.0 bits (227), Expect = 2.020e-19 Identity = 52/120 (43.33%), Postives = 69/120 (57.50%), Query Frame = 1 Query: 7 WNVEFQRILEMPNGTPQERLERALRVRKFKGDFEEKALQHARTIIEEVHLPNLQKSIRSLDVGGQAGGEKYMADNIFFKFAIDSSNLYGGDEHAM------------KAASHELMGLRSY 330 WN EFQ+ILE+P Q++LE+ R+ DF+ A + II E +LPN K+IR+++VGG AGG+KY+ I FKFA D LYG DE+A+ KAA EL G Y Sbjct: 525 WNAEFQKILELPQDDEQQQLEKFERLSALAADFQHTAKTCGKIIISEKNLPNEFKTIRAVEVGGHAGGQKYIYHGILFKFATDWLRLYGSDEYAIPPITSDFQYCFRKAAGLELKGAMRY 644 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83124.19414.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig83124.19414.1 >prot_M-pyrifera_M_contig83124.19414.1 ID=prot_M-pyrifera_M_contig83124.19414.1|Name=mRNA_M-pyrifera_M_contig83124.19414.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=110bp RDWNVEFQRILEMPNGTPQERLERALRVRKFKGDFEEKALQHARTIIEEVback to top mRNA from alignment at M-pyrifera_M_contig83124:506..835+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig83124.19414.1 ID=mRNA_M-pyrifera_M_contig83124.19414.1|Name=mRNA_M-pyrifera_M_contig83124.19414.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=330bp|location=Sequence derived from alignment at M-pyrifera_M_contig83124:506..835+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig83124:506..835+ >mRNA_M-pyrifera_M_contig83124.19414.1 ID=mRNA_M-pyrifera_M_contig83124.19414.1|Name=mRNA_M-pyrifera_M_contig83124.19414.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=660bp|location=Sequence derived from alignment at M-pyrifera_M_contig83124:506..835+ (Macrocystis pyrifera P11B4 male)back to top |