mRNA_M-pyrifera_M_contig82037.19190.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig82037.19190.1
Unique NamemRNA_M-pyrifera_M_contig82037.19190.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig82037.19190.1 vs. uniprot
Match: A0A7S4I9T0_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I9T0_9EUKA)

HSP 1 Score: 210 bits (535), Expect = 6.140e-63
Identity = 98/212 (46.23%), Postives = 133/212 (62.74%), Query Frame = 1
Query:    4 ETNCNPHRTFGVPVVKMVSCKKCGARSEPIHECHFIEYTYVTPLSRTVADVHSRHNHIRYPGMTFEKLLEAVSREFKGCPKDEPH-ACKGCKNPVMRYLKSIPEIFAIGLVWESPNPTLEEIEEMLLLVQPTIDLNKVFGIHETEQA-TPMRLRGMICYYGKHYDVYFYSEHHRKWLVFDDATVKAIGSTWEQVVARCKLGHFHPSVLFYER 633
            E +C  H  FG+  + +V C  C   SEP    HF+EYTY   L         R  H ++P  +FEKL+   ++E+KGCPKD+ H  C   KN V ++L +IP + A GLVW +  P + +I E L ++QP I L ++F +   EQA    R RGMICYYGKHY+ YFY+E  ++W+VFDDATVK +G+ W  V+ RC+ GHFHPSVLFYE+
Sbjct:  127 EESCVVHNIFGINTLSLVICSTCKETSEPTPNLHFVEYTYADDL---------RAQHKKFPNYSFEKLIHITNQEYKGCPKDDKHNPCPNVKNQVEKHLLNIPGVIAFGLVWPTATPEVIDIMETLEIIQPEISLEELFLLSSKEQAEASYRFRGMICYYGKHYNAYFYNESAKQWIVFDDATVKQVGANWSDVLTRCQRGHFHPSVLFYEK 329          
BLAST of mRNA_M-pyrifera_M_contig82037.19190.1 vs. uniprot
Match: A0A2P6N2F1_9EUKA (Inactive ubiquitin carboxyl-terminal hydrolase 54-like n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N2F1_9EUKA)

HSP 1 Score: 148 bits (374), Expect = 3.870e-38
Identity = 82/215 (38.14%), Postives = 117/215 (54.42%), Query Frame = 1
Query:    1 QETNCNPHRTFGVPVVKMVSCKKCGARSEPIHECHFIEYTYVTPLSRTVADVHSRHNHIRYPGMTFEKLLEAVSREFKGCPKDEPHACKGCKN--PVMRYLKSIPEIFAIGLVWESPNPTLEEIEEMLLLVQPTIDLNKVFGIHETEQATPM---RLRGMICYYGKHYDVYFYSEHHRKWLVFDDATVKAIGSTWEQVVARCKLGHFHPSVLFYE 630
            Q+T C  H+ FG+ +++ + C  CGA +EP     F   TY   L     +   R + +     +F +LL     + + CP  E      C N   + R L  +PE+F++G+VW+S  PTL++I E L ++   IDL KVF     EQ  P    +LRGMICYYGKHY ++ Y+E  R+W+V+DD TVKA+       + R   GH  PSVLFYE
Sbjct:  144 QDTQCIAHKVFGMNMIEQLQCNACGAVNEPFRSTSFTALTYANGLK----NASMRESSVN---ASFSQLLHKAGIDRRYCPNKEK-----CNNLCTISRQLTRLPEVFSVGVVWDSDTPTLDDITETLKMISLRIDLAKVFS--SPEQNAPSSWYKLRGMICYYGKHYIIFLYNERRREWMVYDDITVKAL-------MERMVRGHLQPSVLFYE 337          
BLAST of mRNA_M-pyrifera_M_contig82037.19190.1 vs. uniprot
Match: A0A5B7DNA7_PORTR (Inactive ubiquitin carboxyl-terminal hydrolase 54 n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=A0A5B7DNA7_PORTR)

HSP 1 Score: 144 bits (362), Expect = 7.020e-36
Identity = 85/221 (38.46%), Postives = 120/221 (54.30%), Query Frame = 1
Query:   10 NCNPHRTFGVPVVKMVSCKKCGARSEPI---HECHFIEYTYVTPLSRTVADVHSRHNHIRYPGMTFEKLLEAVSREFKGCPKDEPHACKGCKNPVMRYLKSIPEIFAIGLVWESPNPTLEEIEEMLLLVQPTIDLNKVFGIHETE---QATPMRLRGMICYYGKHYDVYFYSEHHRKWLVFDDATVKAIGSTWEQVVARCKLGHFHPSVLFYERVPGSFVP 654
            +C PH+ F + +V+   C +CGA SEP+      H++  + +T  +R + D        + P M F +LL+       G  +D P AC G K  + R L + PEI +IG+VW+S  PTLE I  +   V  T+ L  VF     +   Q T  +L G++ YYGKHY  +FY    R W+ FDDATV+ IG  WEQVV +C+ GHF P +L Y    G+ VP
Sbjct:   94 HCIPHQRFAMTLVEQSVCGECGATSEPLPFTQMVHYVSASALTAQARQMGDASGSGPQSQPPDM-FGQLLKKAGG--MGDIRDCPSAC-GAKIQICRTLMNRPEIVSIGVVWDSERPTLEHIMAVFATVGTTLRLRDVFQSVVDDRWAQHTHHQLVGVVTYYGKHYSTFFYHTKLRVWIYFDDATVREIGPHWEQVVDKCRRGHFQPLLLLYANPSGTPVP 310          
BLAST of mRNA_M-pyrifera_M_contig82037.19190.1 vs. uniprot
Match: UPI000BA80A62 (uncharacterized protein LOC106462148 n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA80A62)

HSP 1 Score: 142 bits (358), Expect = 2.560e-35
Identity = 78/221 (35.29%), Postives = 116/221 (52.49%), Query Frame = 1
Query:    7 TNCNPHRTFGVPVVKMVSCKKCGARSEPIHECHFIEYTYVTPLSRTVADVHSRHNHIRYPGMTFEKLLEAVSREFKGCPKDEPHACKGCKNPVMRYLKSIPEIFAIGLVWESPNPTLEEIEEMLLLVQPTIDLNKVFGI---HETEQATPMRLRGMICYYGKHYDVYFYSEHHRKWLVFDDATVKAIGSTWEQVVARCKLGHFHPSVLFYERVPGSFVPAA 660
            ++C PH+ F + +V+   C  CGA SEP+     + Y   + L      + ++H   R P   F +LL        G  ++ P  C G K  + R L + PEI +IGL+W+S  PTLE I E+   +   + +  +F     +    AT   L G++ YYGKHY  +F+    R W+ FDDATV+ IGS WEQV+ +C+ GHF P +L Y    GS + A+
Sbjct:  156 SHCIPHQKFAMTLVEQTVCHACGATSEPLSFTQMVHYVSTSSLCSQAELMVNQH---RDPADVFGQLLRKAGG--MGDTRECPSTC-GAKMQICRVLMNHPEIVSIGLIWDSERPTLERILEVFKSIGMILKIQDMFHSVVDNHWATATKHHLVGIVTYYGKHYSTFFFHTKLRVWIYFDDATVREIGSKWEQVIEKCRRGHFQPLLLLYANPNGSSISAS 370          
BLAST of mRNA_M-pyrifera_M_contig82037.19190.1 vs. uniprot
Match: UPI001FB59C69 (uncharacterized protein LOC125034728 isoform X1 n=7 Tax=Penaeus TaxID=133894 RepID=UPI001FB59C69)

HSP 1 Score: 141 bits (356), Expect = 4.810e-35
Identity = 83/221 (37.56%), Postives = 120/221 (54.30%), Query Frame = 1
Query:   10 NCNPHRTFGVPVVKMVSCKKCGARSEPI---HECHFIEYTYVTPLSRTVADVHSRHNHIRYPGMTFEKLLEAVSREFKGCPKDEPHACKGCKNPVMRYLKSIPEIFAIGLVWESPNPTLEEIEEMLLLVQPTIDLNKVFGIHETE---QATPMRLRGMICYYGKHYDVYFYSEHHRKWLVFDDATVKAIGSTWEQVVARCKLGHFHPSVLFYERVPGSFVP 654
            +C PH+ F + +V+   C +CGA SEP+      H++  + +T  +R + D  +  +  +     F +LL+       G  +D P AC G K  + R L + PEI +IG+VW+S  PTLE I  +   V  T+ L  VF     +   Q T  +L G++ YYGKHY  +FY    R W+ FDDATV+ IG  WEQVV +C+ GHF P +L Y    G+ VP
Sbjct:  286 HCIPHQRFAMTLVEQSVCGECGATSEPLPFTQMVHYVSASALTAQARQMQDPAASGSQPQVSLDMFGQLLKKAGG--MGDIRDCPSAC-GAKIQICRTLMNRPEIVSIGVVWDSERPTLEHIMAVFATVGTTLRLRDVFQSVVDDRWAQHTQHQLVGVVTYYGKHYSTFFYHTKLRVWIYFDDATVREIGPHWEQVVDKCRRGHFQPLLLLYANPSGTPVP 503          
BLAST of mRNA_M-pyrifera_M_contig82037.19190.1 vs. uniprot
Match: A0A8J5JX42_HOMAM (Inactive ubiquitin carboxyl-terminal hydrolase 54-like n=2 Tax=Homarus americanus TaxID=6706 RepID=A0A8J5JX42_HOMAM)

HSP 1 Score: 141 bits (355), Expect = 6.520e-35
Identity = 84/221 (38.01%), Postives = 118/221 (53.39%), Query Frame = 1
Query:   10 NCNPHRTFGVPVVKMVSCKKCGARSEPI---HECHFIEYTYVTPLSRTVADVHSRHNHIRYPGMTFEKLLEAVSREFKGCPKDEPHACKGCKNPVMRYLKSIPEIFAIGLVWESPNPTLEEIEEMLLLVQPTIDLNKVFGIHETE---QATPMRLRGMICYYGKHYDVYFYSEHHRKWLVFDDATVKAIGSTWEQVVARCKLGHFHPSVLFYERVPGSFVP 654
            +C PH+ F + +V+   C  CGA SEP+      H++  + +T  +R + D        + P   F +LL+       G  +D P AC G K  + R L + PEI +IG+VW+S  PTLE I  +   V  T+ L  VF     +   Q T  +L G++ YYGKHY  +FY    R W+ FDDATV+ IG  WEQVV +C+ GHF P +L Y    G+ VP
Sbjct:  130 HCIPHQRFAMTLVEQSVCGDCGATSEPLPFTQMVHYVSASALTAQARQMNDPGGGPQTQQQPLDMFGQLLKKAGG--MGDIRDCPSAC-GAKIQICRTLMNRPEIVSIGVVWDSERPTLEHIMAVFATVGTTLRLRDVFQSVVDDRWAQHTHHQLVGVVTYYGKHYSTFFYHTKLRVWIYFDDATVREIGPHWEQVVDKCRRGHFQPLLLLYANPSGTPVP 347          
BLAST of mRNA_M-pyrifera_M_contig82037.19190.1 vs. uniprot
Match: A0A8J4YIQ0_CHIOP (Inactive ubiquitin carboxyl-terminal hydrolase 54 n=1 Tax=Chionoecetes opilio TaxID=41210 RepID=A0A8J4YIQ0_CHIOP)

HSP 1 Score: 139 bits (350), Expect = 1.370e-34
Identity = 83/221 (37.56%), Postives = 119/221 (53.85%), Query Frame = 1
Query:   10 NCNPHRTFGVPVVKMVSCKKCGARSEPI---HECHFIEYTYVTPLSRTVADVHSRHNHIRYPGMTFEKLLEAVSREFKGCPKDEPHACKGCKNPVMRYLKSIPEIFAIGLVWESPNPTLEEIEEMLLLVQPTIDLNKVFGIHETE---QATPMRLRGMICYYGKHYDVYFYSEHHRKWLVFDDATVKAIGSTWEQVVARCKLGHFHPSVLFYERVPGSFVP 654
            +C PH+ F + +V+   C +CGA SEP+      H++  + +T  +R   D  ++   +      F +LL+       G  +D P AC G K  + R L + PEI +IG+VW+S  PTLE I  +   V  T+ L  VF     +   Q T  +L G++ YYGKHY  +FY    R W+ FDDATV+ IG  WEQVV +C+ GHF P +L Y    G+ VP
Sbjct:   32 HCIPHQRFAMTLVEQSVCGECGATSEPLPFTQMVHYVSASALTAQARQTGDAGTQVADM------FGQLLKKAGG--MGDIRDCPSAC-GAKIQICRTLMNRPEIVSIGVVWDSERPTLEHIMAVFATVGTTLRLRDVFQSVVDDRWAQHTHHQLVGVVTYYGKHYSTFFYHTKLRVWIYFDDATVREIGPHWEQVVDKCRRGHFQPLLLLYANPSGTPVP 243          
BLAST of mRNA_M-pyrifera_M_contig82037.19190.1 vs. uniprot
Match: A0A3R7M491_PENVA (USP domain-containing protein (Fragment) n=4 Tax=Penaeus vannamei TaxID=6689 RepID=A0A3R7M491_PENVA)

HSP 1 Score: 139 bits (351), Expect = 2.190e-34
Identity = 83/221 (37.56%), Postives = 118/221 (53.39%), Query Frame = 1
Query:   10 NCNPHRTFGVPVVKMVSCKKCGARSEPI---HECHFIEYTYVTPLSRTVADVHSRHNHIRYPGMTFEKLLEAVSREFKGCPKDEPHACKGCKNPVMRYLKSIPEIFAIGLVWESPNPTLEEIEEMLLLVQPTIDLNKVFGIHETE---QATPMRLRGMICYYGKHYDVYFYSEHHRKWLVFDDATVKAIGSTWEQVVARCKLGHFHPSVLFYERVPGSFVP 654
            +C PH+ F + +V+   C  CGA SEP+      H++  + +T  +R + D     +  +     F +LL+       G  +D P AC G K  + R L + PEI +IG+VW+S  PTLE I  +   V  T+ L  VF     +   Q T  +L G++ YYGKHY  +FY    R W+ FDDATV+ IG  WEQVV +C+ GHF P +L Y    G+ VP
Sbjct:  100 HCIPHQRFAMTLVEQSVCGDCGATSEPLPFTQMVHYVSASALTAQARQMQDPAVSGSQPQVALDMFGQLLKKAGG--MGDIRDCPSAC-GAKIQICRTLMNRPEIVSIGVVWDSERPTLEHIMAVFATVGTTLRLRDVFQSVVDDRWAQHTQHQLVGVVTYYGKHYSTFFYHTKLRVWIYFDDATVREIGPHWEQVVDKCRRGHFQPLLLLYANPSGTPVP 317          
BLAST of mRNA_M-pyrifera_M_contig82037.19190.1 vs. uniprot
Match: UPI001E672FC9 (uncharacterized protein LOC123773726 isoform X1 n=3 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E672FC9)

HSP 1 Score: 138 bits (347), Expect = 7.700e-34
Identity = 82/221 (37.10%), Postives = 116/221 (52.49%), Query Frame = 1
Query:   10 NCNPHRTFGVPVVKMVSCKKCGARSEPI---HECHFIEYTYVTPLSRTVADVHSRHNHIRYPGMTFEKLLEAVSREFKGCPKDEPHACKGCKNPVMRYLKSIPEIFAIGLVWESPNPTLEEIEEMLLLVQPTIDLNKVFGIHETE---QATPMRLRGMICYYGKHYDVYFYSEHHRKWLVFDDATVKAIGSTWEQVVARCKLGHFHPSVLFYERVPGSFVP 654
            +C PH+ F + +V+   C  CGA SEP+      H++  + +T  ++ + D              F +LL+       G  +D P AC G K  + R L + PEI +IG+VW+S  PTLE I  +   V  T+ L  VF     +   Q T  +L G++ YYGKHY  +FY    R W+ FDDATV+ IG  WEQVV +C+ GHF P +L Y    G+ VP
Sbjct:  265 HCIPHQRFAMTLVEQSVCGDCGATSEPLPFTQMVHYVSASALTAQAKQMTDPGGSSQTQHQQLDMFGQLLKKAGG--MGDIRDCPSAC-GAKIQICRTLMNRPEIVSIGVVWDSERPTLEHIMAVFATVGTTLRLRDVFQSVVDDRWAQHTHHQLVGVVTYYGKHYSTFFYHTKLRVWIYFDDATVREIGPHWEQVVDKCRRGHFQPLLLLYANPSGTPVP 482          
BLAST of mRNA_M-pyrifera_M_contig82037.19190.1 vs. uniprot
Match: UPI000BA7E7F6 (uncharacterized protein LOC106457962 n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA7E7F6)

HSP 1 Score: 137 bits (345), Expect = 1.410e-33
Identity = 77/215 (35.81%), Postives = 117/215 (54.42%), Query Frame = 1
Query:   10 NCNPHRTFGVPVVKMVSCKKCGARSEPIHECHFIEYTYVTPLSRTVADVHSRHNHIRYPGMTFEKLLEAVSREFKGCPKDEPHACKGCKNPVMRYLKSIPEIFAIGLVWESPNPTLEEIEEMLLLVQPTIDLNKVF-GIHETEQA--TPMRLRGMICYYGKHYDVYFYSEHHRKWLVFDDATVKAIGSTWEQVVARCKLGHFHPSVLFYERVPGS 645
            +C PH+ F + +V+   C  CGA SEP+     + Y   + L      + ++H   R P   F +LL+  +    G  ++ P AC G K  + R L++ PEI ++GLVW+S  PTL+ I E+   +   + L  +F  + +++ A  T   L G++ YYGKHY  +F+    R W+ FDDATV  IG  WEQV+ +C+ GHF P +L Y    GS
Sbjct:  161 HCIPHQKFAMTLVEQTICHSCGATSEPLSFTQMVHYVSTSALRSQATVMVNQH---REPADFFGQLLKNAAGI--GDTRECPSAC-GTKIQICRILQNHPEIVSVGLVWDSERPTLDNILEVFHSIGMVLKLQDMFHSVVDSQWAEVTKHHLVGIVTYYGKHYSTFFFHTKLRIWIYFDDATVLEIGPKWEQVIEKCRRGHFQPLLLLYANPNGS 369          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82037.19190.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4I9T0_9EUKA6.140e-6346.23Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A2P6N2F1_9EUKA3.870e-3838.14Inactive ubiquitin carboxyl-terminal hydrolase 54-... [more]
A0A5B7DNA7_PORTR7.020e-3638.46Inactive ubiquitin carboxyl-terminal hydrolase 54 ... [more]
UPI000BA80A622.560e-3535.29uncharacterized protein LOC106462148 n=1 Tax=Limul... [more]
UPI001FB59C694.810e-3537.56uncharacterized protein LOC125034728 isoform X1 n=... [more]
A0A8J5JX42_HOMAM6.520e-3538.01Inactive ubiquitin carboxyl-terminal hydrolase 54-... [more]
A0A8J4YIQ0_CHIOP1.370e-3437.56Inactive ubiquitin carboxyl-terminal hydrolase 54 ... [more]
A0A3R7M491_PENVA2.190e-3437.56USP domain-containing protein (Fragment) n=4 Tax=P... [more]
UPI001E672FC97.700e-3437.10uncharacterized protein LOC123773726 isoform X1 n=... [more]
UPI000BA7E7F61.410e-3335.81uncharacterized protein LOC106457962 n=1 Tax=Limul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82037contigM-pyrifera_M_contig82037:121..905 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score134.4
Seed ortholog evalue6.4e-29
Seed eggNOG ortholog136037.KDR11224
Preferred nameec
Hectar predicted targeting categoryother localisation
GOsGO:0001654,GO:0001736,GO:0001738,GO:0001745,GO:0002009,GO:0003674,GO:0005488,GO:0005515,GO:0007163,GO:0007164,GO:0007275,GO:0007389,GO:0007423,GO:0008150,GO:0008157,GO:0008219,GO:0009653,GO:0009887,GO:0009888,GO:0009987,GO:0010623,GO:0010720,GO:0010941,GO:0010942,GO:0012501,GO:0016318,GO:0019899,GO:0019902,GO:0019903,GO:0022603,GO:0030154,GO:0032501,GO:0032502,GO:0042067,GO:0043067,GO:0043068,GO:0045595,GO:0045597,GO:0046666,GO:0046667,GO:0046668,GO:0046669,GO:0046670,GO:0046672,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048592,GO:0048729,GO:0048731,GO:0048749,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051239,GO:0051240,GO:0060284,GO:0060429,GO:0065007,GO:0090596,GO:2000026,GO:2000027
EggNOG free text desc.ubiquitinyl hydrolase activity. It is involved in the biological process described with ubiquitin-dependent protein catabolic process
EggNOG OGs38CTI@33154,3BAQG@33208,3CSHJ@33213,3SH4T@50557,41TWP@6656,KOG1887@1,KOG1887@2759
COG Functional cat.O
Best tax levelInsecta
Best eggNOG OGNA|NA|NA
Exons3
Model size660
Cds size660
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82037.19190.1prot_M-pyrifera_M_contig82037.19190.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig82037 121..905 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816727.460373-CDS-M-pyrifera_M_contig82037:120..2251622816727.460373-CDS-M-pyrifera_M_contig82037:120..225Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82037 121..225 -
1692278143.4769707-CDS-M-pyrifera_M_contig82037:120..2251692278143.4769707-CDS-M-pyrifera_M_contig82037:120..225Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82037 121..225 -
1622816727.4720652-CDS-M-pyrifera_M_contig82037:287..7051622816727.4720652-CDS-M-pyrifera_M_contig82037:287..705Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82037 288..705 -
1692278143.4907577-CDS-M-pyrifera_M_contig82037:287..7051692278143.4907577-CDS-M-pyrifera_M_contig82037:287..705Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82037 288..705 -
1622816727.484723-CDS-M-pyrifera_M_contig82037:768..9051622816727.484723-CDS-M-pyrifera_M_contig82037:768..905Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82037 769..905 -
1692278143.5034-CDS-M-pyrifera_M_contig82037:768..9051692278143.5034-CDS-M-pyrifera_M_contig82037:768..905Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82037 769..905 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig82037.19190.1

>prot_M-pyrifera_M_contig82037.19190.1 ID=prot_M-pyrifera_M_contig82037.19190.1|Name=mRNA_M-pyrifera_M_contig82037.19190.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=220bp
QETNCNPHRTFGVPVVKMVSCKKCGARSEPIHECHFIEYTYVTPLSRTVA
DVHSRHNHIRYPGMTFEKLLEAVSREFKGCPKDEPHACKGCKNPVMRYLK
SIPEIFAIGLVWESPNPTLEEIEEMLLLVQPTIDLNKVFGIHETEQATPM
RLRGMICYYGKHYDVYFYSEHHRKWLVFDDATVKAIGSTWEQVVARCKLG
HFHPSVLFYERVPGSFVPAA
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mRNA from alignment at M-pyrifera_M_contig82037:121..905-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig82037.19190.1 ID=mRNA_M-pyrifera_M_contig82037.19190.1|Name=mRNA_M-pyrifera_M_contig82037.19190.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=785bp|location=Sequence derived from alignment at M-pyrifera_M_contig82037:121..905- (Macrocystis pyrifera P11B4 male)
CAGGAGACAAACTGCAATCCCCACAGGACGTTCGGAGTGCCTGTCGTCAA GATGGTGAGCTGCAAGAAGTGCGGAGCGCGATCCGAACCCATCCACGAGT GCCACTTCATTGAGTACACCTATGTCACTCCCCTCAGGTACACTCCTCTC TCTCTCTCTCTCTCTCTCTCTCGTGCGCCCTCGCCTCCGCTCCCCTGCAG TAGAACCGTAGCTGACGTTCACTCGAGGCACAATCACATCAGGTACCCTG GTATGACCTTCGAGAAGTTGCTTGAGGCTGTATCTCGCGAGTTCAAGGGC TGCCCCAAGGACGAGCCTCATGCCTGCAAGGGTTGCAAAAACCCTGTAAT GAGGTACCTCAAGAGCATCCCCGAGATCTTCGCCATCGGATTGGTGTGGG AAAGCCCCAACCCCACCCTGGAAGAGATCGAGGAGATGTTGTTGCTTGTC CAGCCAACAATCGACCTCAACAAGGTGTTCGGGATTCATGAGACGGAGCA AGCAACCCCAATGAGGCTTCGCGGCATGATCTGCTACTACGGCAAGCATT ACGATGTCTACTTCTACAGCGAACACCACCGAAAGTGGCTCGTGTTCGAC GATGCCACCGTGAAAGCCGTGAGTCCCCCTCTGCCCACTCTTGACGCCAC AGCTGTTACGCAGGCCCTTACTTCATTTAGATTGGGTCGACGTGGGAGCA AGTGGTGGCCAGATGCAAGCTGGGGCACTTCCATCCTTCAGTGTTGTTCT ACGAGCGAGTGCCTGGATCGTTCGTGCCGGCAGCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig82037:121..905-

>mRNA_M-pyrifera_M_contig82037.19190.1 ID=mRNA_M-pyrifera_M_contig82037.19190.1|Name=mRNA_M-pyrifera_M_contig82037.19190.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1320bp|location=Sequence derived from alignment at M-pyrifera_M_contig82037:121..905- (Macrocystis pyrifera P11B4 male)
CAGGAGACAAACTGCAATCCCCACAGGACGTTCGGAGTGCCTGTCGTCAA
GATGGTGAGCTGCAAGAAGTGCGGAGCGCGATCCGAACCCATCCACGAGT
GCCACTTCATTGAGTACACCTATGTCACTCCCCTCAGCAGGAGACAAACT
GCAATCCCCACAGGACGTTCGGAGTGCCTGTCGTCAAGATGGTGAGCTGC
AAGAAGTGCGGAGCGCGATCCGAACCCATCCACGAGTGCCACTTCATTGA
GTACACCTATGTCACTCCCCTCAGTAGAACCGTAGCTGACGTTCACTCGA
GGCACAATCACATCAGGTACCCTGGTATGACCTTCGAGAAGTTGCTTGAG
GCTGTATCTCGCGAGTTCAAGGGCTGCCCCAAGGACGAGCCTCATGCCTG
CAAGGGTTGCAAAAACCCTGTAATGAGGTACCTCAAGAGCATCCCCGAGA
TCTTCGCCATCGGATTGGTGTGGGAAAGCCCCAACCCCACCCTGGAAGAG
ATCGAGGAGATGTTGTTGCTTGTCCAGCCAACAATCGACCTCAACAAGGT
GTTCGGGATTCATGAGACGGAGCAAGCAACCCCAATGAGGCTTCGCGGCA
TGATCTGCTACTACGGCAAGCATTACGATGTCTACTTCTACAGCGAACAC
CACCGAAAGTGGCTCGTGTTCGACGATGCCACCGTGAAAGCCTAGAACCG
TAGCTGACGTTCACTCGAGGCACAATCACATCAGGTACCCTGGTATGACC
TTCGAGAAGTTGCTTGAGGCTGTATCTCGCGAGTTCAAGGGCTGCCCCAA
GGACGAGCCTCATGCCTGCAAGGGTTGCAAAAACCCTGTAATGAGGTACC
TCAAGAGCATCCCCGAGATCTTCGCCATCGGATTGGTGTGGGAAAGCCCC
AACCCCACCCTGGAAGAGATCGAGGAGATGTTGTTGCTTGTCCAGCCAAC
AATCGACCTCAACAAGGTGTTCGGGATTCATGAGACGGAGCAAGCAACCC
CAATGAGGCTTCGCGGCATGATCTGCTACTACGGCAAGCATTACGATGTC
TACTTCTACAGCGAACACCACCGAAAGTGGCTCGTGTTCGACGATGCCAC
CGTGAAAGCCATTGGGTCGACGTGGGAGCAAGTGGTGGCCAGATGCAAGC
TGGGGCACTTCCATCCTTCAGTGTTGTTCTACGAGCGAGTGCCTGGATCG
TTCGTGCCGGCAGCGATTGGGTCGACGTGGGAGCAAGTGGTGGCCAGATG
CAAGCTGGGGCACTTCCATCCTTCAGTGTTGTTCTACGAGCGAGTGCCTG
GATCGTTCGTGCCGGCAGCG
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