mRNA_M-pyrifera_M_contig82037.19190.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig82037.19190.1 vs. uniprot
Match: A0A7S4I9T0_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I9T0_9EUKA) HSP 1 Score: 210 bits (535), Expect = 6.140e-63 Identity = 98/212 (46.23%), Postives = 133/212 (62.74%), Query Frame = 1 Query: 4 ETNCNPHRTFGVPVVKMVSCKKCGARSEPIHECHFIEYTYVTPLSRTVADVHSRHNHIRYPGMTFEKLLEAVSREFKGCPKDEPH-ACKGCKNPVMRYLKSIPEIFAIGLVWESPNPTLEEIEEMLLLVQPTIDLNKVFGIHETEQA-TPMRLRGMICYYGKHYDVYFYSEHHRKWLVFDDATVKAIGSTWEQVVARCKLGHFHPSVLFYER 633 E +C H FG+ + +V C C SEP HF+EYTY L R H ++P +FEKL+ ++E+KGCPKD+ H C KN V ++L +IP + A GLVW + P + +I E L ++QP I L ++F + EQA R RGMICYYGKHY+ YFY+E ++W+VFDDATVK +G+ W V+ RC+ GHFHPSVLFYE+ Sbjct: 127 EESCVVHNIFGINTLSLVICSTCKETSEPTPNLHFVEYTYADDL---------RAQHKKFPNYSFEKLIHITNQEYKGCPKDDKHNPCPNVKNQVEKHLLNIPGVIAFGLVWPTATPEVIDIMETLEIIQPEISLEELFLLSSKEQAEASYRFRGMICYYGKHYNAYFYNESAKQWIVFDDATVKQVGANWSDVLTRCQRGHFHPSVLFYEK 329
BLAST of mRNA_M-pyrifera_M_contig82037.19190.1 vs. uniprot
Match: A0A2P6N2F1_9EUKA (Inactive ubiquitin carboxyl-terminal hydrolase 54-like n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N2F1_9EUKA) HSP 1 Score: 148 bits (374), Expect = 3.870e-38 Identity = 82/215 (38.14%), Postives = 117/215 (54.42%), Query Frame = 1 Query: 1 QETNCNPHRTFGVPVVKMVSCKKCGARSEPIHECHFIEYTYVTPLSRTVADVHSRHNHIRYPGMTFEKLLEAVSREFKGCPKDEPHACKGCKN--PVMRYLKSIPEIFAIGLVWESPNPTLEEIEEMLLLVQPTIDLNKVFGIHETEQATPM---RLRGMICYYGKHYDVYFYSEHHRKWLVFDDATVKAIGSTWEQVVARCKLGHFHPSVLFYE 630 Q+T C H+ FG+ +++ + C CGA +EP F TY L + R + + +F +LL + + CP E C N + R L +PE+F++G+VW+S PTL++I E L ++ IDL KVF EQ P +LRGMICYYGKHY ++ Y+E R+W+V+DD TVKA+ + R GH PSVLFYE Sbjct: 144 QDTQCIAHKVFGMNMIEQLQCNACGAVNEPFRSTSFTALTYANGLK----NASMRESSVN---ASFSQLLHKAGIDRRYCPNKEK-----CNNLCTISRQLTRLPEVFSVGVVWDSDTPTLDDITETLKMISLRIDLAKVFS--SPEQNAPSSWYKLRGMICYYGKHYIIFLYNERRREWMVYDDITVKAL-------MERMVRGHLQPSVLFYE 337
BLAST of mRNA_M-pyrifera_M_contig82037.19190.1 vs. uniprot
Match: A0A5B7DNA7_PORTR (Inactive ubiquitin carboxyl-terminal hydrolase 54 n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=A0A5B7DNA7_PORTR) HSP 1 Score: 144 bits (362), Expect = 7.020e-36 Identity = 85/221 (38.46%), Postives = 120/221 (54.30%), Query Frame = 1 Query: 10 NCNPHRTFGVPVVKMVSCKKCGARSEPI---HECHFIEYTYVTPLSRTVADVHSRHNHIRYPGMTFEKLLEAVSREFKGCPKDEPHACKGCKNPVMRYLKSIPEIFAIGLVWESPNPTLEEIEEMLLLVQPTIDLNKVFGIHETE---QATPMRLRGMICYYGKHYDVYFYSEHHRKWLVFDDATVKAIGSTWEQVVARCKLGHFHPSVLFYERVPGSFVP 654 +C PH+ F + +V+ C +CGA SEP+ H++ + +T +R + D + P M F +LL+ G +D P AC G K + R L + PEI +IG+VW+S PTLE I + V T+ L VF + Q T +L G++ YYGKHY +FY R W+ FDDATV+ IG WEQVV +C+ GHF P +L Y G+ VP Sbjct: 94 HCIPHQRFAMTLVEQSVCGECGATSEPLPFTQMVHYVSASALTAQARQMGDASGSGPQSQPPDM-FGQLLKKAGG--MGDIRDCPSAC-GAKIQICRTLMNRPEIVSIGVVWDSERPTLEHIMAVFATVGTTLRLRDVFQSVVDDRWAQHTHHQLVGVVTYYGKHYSTFFYHTKLRVWIYFDDATVREIGPHWEQVVDKCRRGHFQPLLLLYANPSGTPVP 310
BLAST of mRNA_M-pyrifera_M_contig82037.19190.1 vs. uniprot
Match: UPI000BA80A62 (uncharacterized protein LOC106462148 n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA80A62) HSP 1 Score: 142 bits (358), Expect = 2.560e-35 Identity = 78/221 (35.29%), Postives = 116/221 (52.49%), Query Frame = 1 Query: 7 TNCNPHRTFGVPVVKMVSCKKCGARSEPIHECHFIEYTYVTPLSRTVADVHSRHNHIRYPGMTFEKLLEAVSREFKGCPKDEPHACKGCKNPVMRYLKSIPEIFAIGLVWESPNPTLEEIEEMLLLVQPTIDLNKVFGI---HETEQATPMRLRGMICYYGKHYDVYFYSEHHRKWLVFDDATVKAIGSTWEQVVARCKLGHFHPSVLFYERVPGSFVPAA 660 ++C PH+ F + +V+ C CGA SEP+ + Y + L + ++H R P F +LL G ++ P C G K + R L + PEI +IGL+W+S PTLE I E+ + + + +F + AT L G++ YYGKHY +F+ R W+ FDDATV+ IGS WEQV+ +C+ GHF P +L Y GS + A+ Sbjct: 156 SHCIPHQKFAMTLVEQTVCHACGATSEPLSFTQMVHYVSTSSLCSQAELMVNQH---RDPADVFGQLLRKAGG--MGDTRECPSTC-GAKMQICRVLMNHPEIVSIGLIWDSERPTLERILEVFKSIGMILKIQDMFHSVVDNHWATATKHHLVGIVTYYGKHYSTFFFHTKLRVWIYFDDATVREIGSKWEQVIEKCRRGHFQPLLLLYANPNGSSISAS 370
BLAST of mRNA_M-pyrifera_M_contig82037.19190.1 vs. uniprot
Match: UPI001FB59C69 (uncharacterized protein LOC125034728 isoform X1 n=7 Tax=Penaeus TaxID=133894 RepID=UPI001FB59C69) HSP 1 Score: 141 bits (356), Expect = 4.810e-35 Identity = 83/221 (37.56%), Postives = 120/221 (54.30%), Query Frame = 1 Query: 10 NCNPHRTFGVPVVKMVSCKKCGARSEPI---HECHFIEYTYVTPLSRTVADVHSRHNHIRYPGMTFEKLLEAVSREFKGCPKDEPHACKGCKNPVMRYLKSIPEIFAIGLVWESPNPTLEEIEEMLLLVQPTIDLNKVFGIHETE---QATPMRLRGMICYYGKHYDVYFYSEHHRKWLVFDDATVKAIGSTWEQVVARCKLGHFHPSVLFYERVPGSFVP 654 +C PH+ F + +V+ C +CGA SEP+ H++ + +T +R + D + + + F +LL+ G +D P AC G K + R L + PEI +IG+VW+S PTLE I + V T+ L VF + Q T +L G++ YYGKHY +FY R W+ FDDATV+ IG WEQVV +C+ GHF P +L Y G+ VP Sbjct: 286 HCIPHQRFAMTLVEQSVCGECGATSEPLPFTQMVHYVSASALTAQARQMQDPAASGSQPQVSLDMFGQLLKKAGG--MGDIRDCPSAC-GAKIQICRTLMNRPEIVSIGVVWDSERPTLEHIMAVFATVGTTLRLRDVFQSVVDDRWAQHTQHQLVGVVTYYGKHYSTFFYHTKLRVWIYFDDATVREIGPHWEQVVDKCRRGHFQPLLLLYANPSGTPVP 503
BLAST of mRNA_M-pyrifera_M_contig82037.19190.1 vs. uniprot
Match: A0A8J5JX42_HOMAM (Inactive ubiquitin carboxyl-terminal hydrolase 54-like n=2 Tax=Homarus americanus TaxID=6706 RepID=A0A8J5JX42_HOMAM) HSP 1 Score: 141 bits (355), Expect = 6.520e-35 Identity = 84/221 (38.01%), Postives = 118/221 (53.39%), Query Frame = 1 Query: 10 NCNPHRTFGVPVVKMVSCKKCGARSEPI---HECHFIEYTYVTPLSRTVADVHSRHNHIRYPGMTFEKLLEAVSREFKGCPKDEPHACKGCKNPVMRYLKSIPEIFAIGLVWESPNPTLEEIEEMLLLVQPTIDLNKVFGIHETE---QATPMRLRGMICYYGKHYDVYFYSEHHRKWLVFDDATVKAIGSTWEQVVARCKLGHFHPSVLFYERVPGSFVP 654 +C PH+ F + +V+ C CGA SEP+ H++ + +T +R + D + P F +LL+ G +D P AC G K + R L + PEI +IG+VW+S PTLE I + V T+ L VF + Q T +L G++ YYGKHY +FY R W+ FDDATV+ IG WEQVV +C+ GHF P +L Y G+ VP Sbjct: 130 HCIPHQRFAMTLVEQSVCGDCGATSEPLPFTQMVHYVSASALTAQARQMNDPGGGPQTQQQPLDMFGQLLKKAGG--MGDIRDCPSAC-GAKIQICRTLMNRPEIVSIGVVWDSERPTLEHIMAVFATVGTTLRLRDVFQSVVDDRWAQHTHHQLVGVVTYYGKHYSTFFYHTKLRVWIYFDDATVREIGPHWEQVVDKCRRGHFQPLLLLYANPSGTPVP 347
BLAST of mRNA_M-pyrifera_M_contig82037.19190.1 vs. uniprot
Match: A0A8J4YIQ0_CHIOP (Inactive ubiquitin carboxyl-terminal hydrolase 54 n=1 Tax=Chionoecetes opilio TaxID=41210 RepID=A0A8J4YIQ0_CHIOP) HSP 1 Score: 139 bits (350), Expect = 1.370e-34 Identity = 83/221 (37.56%), Postives = 119/221 (53.85%), Query Frame = 1 Query: 10 NCNPHRTFGVPVVKMVSCKKCGARSEPI---HECHFIEYTYVTPLSRTVADVHSRHNHIRYPGMTFEKLLEAVSREFKGCPKDEPHACKGCKNPVMRYLKSIPEIFAIGLVWESPNPTLEEIEEMLLLVQPTIDLNKVFGIHETE---QATPMRLRGMICYYGKHYDVYFYSEHHRKWLVFDDATVKAIGSTWEQVVARCKLGHFHPSVLFYERVPGSFVP 654 +C PH+ F + +V+ C +CGA SEP+ H++ + +T +R D ++ + F +LL+ G +D P AC G K + R L + PEI +IG+VW+S PTLE I + V T+ L VF + Q T +L G++ YYGKHY +FY R W+ FDDATV+ IG WEQVV +C+ GHF P +L Y G+ VP Sbjct: 32 HCIPHQRFAMTLVEQSVCGECGATSEPLPFTQMVHYVSASALTAQARQTGDAGTQVADM------FGQLLKKAGG--MGDIRDCPSAC-GAKIQICRTLMNRPEIVSIGVVWDSERPTLEHIMAVFATVGTTLRLRDVFQSVVDDRWAQHTHHQLVGVVTYYGKHYSTFFYHTKLRVWIYFDDATVREIGPHWEQVVDKCRRGHFQPLLLLYANPSGTPVP 243
BLAST of mRNA_M-pyrifera_M_contig82037.19190.1 vs. uniprot
Match: A0A3R7M491_PENVA (USP domain-containing protein (Fragment) n=4 Tax=Penaeus vannamei TaxID=6689 RepID=A0A3R7M491_PENVA) HSP 1 Score: 139 bits (351), Expect = 2.190e-34 Identity = 83/221 (37.56%), Postives = 118/221 (53.39%), Query Frame = 1 Query: 10 NCNPHRTFGVPVVKMVSCKKCGARSEPI---HECHFIEYTYVTPLSRTVADVHSRHNHIRYPGMTFEKLLEAVSREFKGCPKDEPHACKGCKNPVMRYLKSIPEIFAIGLVWESPNPTLEEIEEMLLLVQPTIDLNKVFGIHETE---QATPMRLRGMICYYGKHYDVYFYSEHHRKWLVFDDATVKAIGSTWEQVVARCKLGHFHPSVLFYERVPGSFVP 654 +C PH+ F + +V+ C CGA SEP+ H++ + +T +R + D + + F +LL+ G +D P AC G K + R L + PEI +IG+VW+S PTLE I + V T+ L VF + Q T +L G++ YYGKHY +FY R W+ FDDATV+ IG WEQVV +C+ GHF P +L Y G+ VP Sbjct: 100 HCIPHQRFAMTLVEQSVCGDCGATSEPLPFTQMVHYVSASALTAQARQMQDPAVSGSQPQVALDMFGQLLKKAGG--MGDIRDCPSAC-GAKIQICRTLMNRPEIVSIGVVWDSERPTLEHIMAVFATVGTTLRLRDVFQSVVDDRWAQHTQHQLVGVVTYYGKHYSTFFYHTKLRVWIYFDDATVREIGPHWEQVVDKCRRGHFQPLLLLYANPSGTPVP 317
BLAST of mRNA_M-pyrifera_M_contig82037.19190.1 vs. uniprot
Match: UPI001E672FC9 (uncharacterized protein LOC123773726 isoform X1 n=3 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E672FC9) HSP 1 Score: 138 bits (347), Expect = 7.700e-34 Identity = 82/221 (37.10%), Postives = 116/221 (52.49%), Query Frame = 1 Query: 10 NCNPHRTFGVPVVKMVSCKKCGARSEPI---HECHFIEYTYVTPLSRTVADVHSRHNHIRYPGMTFEKLLEAVSREFKGCPKDEPHACKGCKNPVMRYLKSIPEIFAIGLVWESPNPTLEEIEEMLLLVQPTIDLNKVFGIHETE---QATPMRLRGMICYYGKHYDVYFYSEHHRKWLVFDDATVKAIGSTWEQVVARCKLGHFHPSVLFYERVPGSFVP 654 +C PH+ F + +V+ C CGA SEP+ H++ + +T ++ + D F +LL+ G +D P AC G K + R L + PEI +IG+VW+S PTLE I + V T+ L VF + Q T +L G++ YYGKHY +FY R W+ FDDATV+ IG WEQVV +C+ GHF P +L Y G+ VP Sbjct: 265 HCIPHQRFAMTLVEQSVCGDCGATSEPLPFTQMVHYVSASALTAQAKQMTDPGGSSQTQHQQLDMFGQLLKKAGG--MGDIRDCPSAC-GAKIQICRTLMNRPEIVSIGVVWDSERPTLEHIMAVFATVGTTLRLRDVFQSVVDDRWAQHTHHQLVGVVTYYGKHYSTFFYHTKLRVWIYFDDATVREIGPHWEQVVDKCRRGHFQPLLLLYANPSGTPVP 482
BLAST of mRNA_M-pyrifera_M_contig82037.19190.1 vs. uniprot
Match: UPI000BA7E7F6 (uncharacterized protein LOC106457962 n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA7E7F6) HSP 1 Score: 137 bits (345), Expect = 1.410e-33 Identity = 77/215 (35.81%), Postives = 117/215 (54.42%), Query Frame = 1 Query: 10 NCNPHRTFGVPVVKMVSCKKCGARSEPIHECHFIEYTYVTPLSRTVADVHSRHNHIRYPGMTFEKLLEAVSREFKGCPKDEPHACKGCKNPVMRYLKSIPEIFAIGLVWESPNPTLEEIEEMLLLVQPTIDLNKVF-GIHETEQA--TPMRLRGMICYYGKHYDVYFYSEHHRKWLVFDDATVKAIGSTWEQVVARCKLGHFHPSVLFYERVPGS 645 +C PH+ F + +V+ C CGA SEP+ + Y + L + ++H R P F +LL+ + G ++ P AC G K + R L++ PEI ++GLVW+S PTL+ I E+ + + L +F + +++ A T L G++ YYGKHY +F+ R W+ FDDATV IG WEQV+ +C+ GHF P +L Y GS Sbjct: 161 HCIPHQKFAMTLVEQTICHSCGATSEPLSFTQMVHYVSTSALRSQATVMVNQH---REPADFFGQLLKNAAGI--GDTRECPSAC-GTKIQICRILQNHPEIVSVGLVWDSERPTLDNILEVFHSIGMVLKLQDMFHSVVDSQWAEVTKHHLVGIVTYYGKHYSTFFFHTKLRIWIYFDDATVLEIGPKWEQVIEKCRRGHFQPLLLLYANPNGS 369 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82037.19190.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig82037.19190.1 >prot_M-pyrifera_M_contig82037.19190.1 ID=prot_M-pyrifera_M_contig82037.19190.1|Name=mRNA_M-pyrifera_M_contig82037.19190.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=220bp QETNCNPHRTFGVPVVKMVSCKKCGARSEPIHECHFIEYTYVTPLSRTVAback to top mRNA from alignment at M-pyrifera_M_contig82037:121..905- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig82037.19190.1 ID=mRNA_M-pyrifera_M_contig82037.19190.1|Name=mRNA_M-pyrifera_M_contig82037.19190.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=785bp|location=Sequence derived from alignment at M-pyrifera_M_contig82037:121..905- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig82037:121..905- >mRNA_M-pyrifera_M_contig82037.19190.1 ID=mRNA_M-pyrifera_M_contig82037.19190.1|Name=mRNA_M-pyrifera_M_contig82037.19190.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1320bp|location=Sequence derived from alignment at M-pyrifera_M_contig82037:121..905- (Macrocystis pyrifera P11B4 male)back to top |