mRNA_M-pyrifera_M_contig81142.18980.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig81142.18980.1 vs. uniprot
Match: A0A7S2UM25_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UM25_9STRA) HSP 1 Score: 116 bits (290), Expect = 2.220e-27 Identity = 68/183 (37.16%), Postives = 106/183 (57.92%), Query Frame = 1 Query: 31 VGKGVQRVIVVEKECVMHRLVEDRWPETSGSVLVSGKGMPDLPSRALIHALHTIHHLPVKGLCDCGPFGVAILAVFRYGSNTPG--DGHRFQTPLHWLGLQPSDASILP--LPPHTHQTLTKSDVSKTQSLLHDSRLHPSWKMQVKRYWDQQDAWKC--------ELEALLACGLHGLEDFLN 543 V + + ++V+EKE V +RL EDR+ E +LV+GKG PDL +RAL+H+LH LPV GLCDC P+GV +L ++ GS G G R+ P+ W+GL+PS + + LP +Q+LT+ D + +SL ++ + V ++++D +C ELEAL G+ + D+L Sbjct: 227 VSQHAKCILVIEKEGVYNRLSEDRFFERYPCILVTGKGFPDLATRALVHSLHHELQLPVYGLCDCNPYGVGVLQTYQRGSTKMGLDGGSRYTVPIQWIGLRPSQVASMKADLPRDVYQSLTELDERRIESLCRETSPFTN----VLNGYERRDELRCMAKAGYKVELEALHWLGMDFMCDWLE 405
BLAST of mRNA_M-pyrifera_M_contig81142.18980.1 vs. uniprot
Match: A0A6A3F4G6_9STRA (TP6A_N domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3F4G6_9STRA) HSP 1 Score: 114 bits (285), Expect = 4.790e-27 Identity = 59/175 (33.71%), Postives = 100/175 (57.14%), Query Frame = 1 Query: 28 EVGKGVQRVIVVEKECVMHRLVEDRWPETSGSVLVSGKGMPDLPSRALIHALHTIHHLPVKGLCDCGPFGVAILAVFRYGS-NTPGDGHRFQTPLHWLGLQPSDASILPLPPHTHQTLTKSDVSKTQSLLHDS--RLHPSWKMQVKRYWDQQDAWKCELEALLACGLHGLEDFLN 543 +V + ++VVEK+ + +RL ED++ E S+L++G+G PDL +R + L +PV GLCDC PFG++I+ ++ GS P + + + W+G++PS + L LP + + LT+ D++ SLL S + + ++ +V+ + + WK ELEAL G L FL Sbjct: 183 DVQSNAKYIVVVEKDGIFNRLREDKFYEMVPSILITGRGFPDLATRVFVSLLSHALKIPVLGLCDCNPFGLSIMLTYKLGSARMPLESLEYAVDIKWIGVRPSQVATLGLPQSSFKALTQKDIAVANSLLQASFVQANEHYRREVRMWLEDSLPWKIELEALHFLGFTFLTSFLQ 357
BLAST of mRNA_M-pyrifera_M_contig81142.18980.1 vs. uniprot
Match: A0A7S2JQ12_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JQ12_9STRA) HSP 1 Score: 112 bits (281), Expect = 1.740e-26 Identity = 67/174 (38.51%), Postives = 102/174 (58.62%), Query Frame = 1 Query: 52 VIVVEKECVMHRLVEDRWPETSGSVLVSGKGMPDLPSRALIHALHTIHHLPVKGLCDCGPFGVAILAVFRYGSNTPG-DGHRFQTPLHWLGLQPSDASILP--LPPHTHQTLTKSDVSKTQSLLHDS----RLHPSWKMQVKRYWDQQDAWKCELEALLACGLHGLEDFLNTKL 552 ++ VEKE + RL EDR+ + +L++GKG PDL SRA + ALH + ++PV GLCDC PFGV++L + GS+ G D + P+ WLGL+PS L LP Q LT +D K SL+ ++ +P K ++ + Q++ +K ELE+L GL L ++L ++ Sbjct: 186 ILCVEKEGIYTRLSEDRFFDKVPCILITGKGFPDLASRACVFALHNMLNIPVYGLCDCNPFGVSVLMTYWRGSSKLGNDADSYSVPVKWLGLRPSHIEELSPELPQEVFQNLTNTDFRKLDSLMSETCDFVDKNPERKEEL--FEMQENGYKLELESLQWIGLDFLTNWLIDRI 357
BLAST of mRNA_M-pyrifera_M_contig81142.18980.1 vs. uniprot
Match: W7TGS0_9STRA (Meiotic recombination protein spo11 isoform 2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGS0_9STRA) HSP 1 Score: 113 bits (282), Expect = 4.980e-26 Identity = 67/169 (39.64%), Postives = 95/169 (56.21%), Query Frame = 1 Query: 52 VIVVEKECVMHRLVEDRW-PETSGSVLVSGKGMPDLPSRALIHALHTIHHLPVKGLCDCGPFGVAILAVFRYGSNTPGDGHRFQTPLHWLGLQPSDASI-LPLPPHTHQTLTKSDVSKTQSLLHDS--RLHPSWKMQVKRYWDQQDAWKCELEALLA-CGLHGLEDFLN 543 ++VVEKEC+ RL+ D + G VL++GKG PDL +RA + AL +PV GLCDC P G+A+L ++ GS + ++ PL WLGL+PS LP T Q ++ D+SK SL+ + H W+ +V+ + KCELEAL G G DFL+ Sbjct: 307 IVVVEKECMFKRLIGDGLLGQAGGIVLITGKGYPDLATRACVKALVDAFAVPVVGLCDCNPHGIALLLTYKCGSFRMPESQAYRIPLCWLGLRPSQLKRRFDLPDDTFQAFSEGDISKCSSLMDSPFCQAHLPWREEVETMASEH--LKCELEALNTFSGSKGRRDFLS 473
BLAST of mRNA_M-pyrifera_M_contig81142.18980.1 vs. uniprot
Match: D0MT30_PHYIT (TP6A_N domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MT30_PHYIT) HSP 1 Score: 109 bits (272), Expect = 2.820e-25 Identity = 61/173 (35.26%), Postives = 97/173 (56.07%), Query Frame = 1 Query: 34 GKGVQRVIVVEKECVMHRLVEDRWPETSGSVLVSGKGMPDLPSRALIHALHTIHHLPVKGLCDCGPFGVAILAVFRYGS-NTPGDGHRFQTPLHWLGLQPSDASILPLPPHTHQTLTKSDVSKTQSLLHDSRLHPS--WKMQVKRYWDQQDAWKCELEALLACGLHGLEDFLN 543 G G + I E + +ED++ ET S+L++G+G PDL +RA ++ L +PV GLCDC PFG++I+ ++ GS P D R+ + W+G++PS S L LP + + LT+ D++ SL+ S + + +K +V+ + WK ELEAL + G L FL Sbjct: 168 GSGEEVSITHELLQIKPHDIEDKFFETVPSILITGRGFPDLATRAFVNLLSNALGIPVLGLCDCNPFGLSIMLTYKLGSARMPLDSLRYAVDIKWVGVRPSQVSHLGLPTSSFKALTRKDLAVADSLMRASFIQANAFFKDEVQMWLGDALPWKIELEALYSSGFTFLTSFLQ 340
BLAST of mRNA_M-pyrifera_M_contig81142.18980.1 vs. uniprot
Match: W2KQB5_PHYPR (TP6A_N domain-containing protein n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=W2KQB5_PHYPR) HSP 1 Score: 110 bits (274), Expect = 2.830e-25 Identity = 57/167 (34.13%), Postives = 97/167 (58.08%), Query Frame = 1 Query: 52 VIVVEKECVMHRLVEDRWPETSGSVLVSGKGMPDLPSRALIHALHTIHHLPVKGLCDCGPFGVAILAVFRYGS-NTPGDGHRFQTPLHWLGLQPSDASILPLPPHTHQTLTKSDVSKTQSLLHDSRLHPS--WKMQVKRYWDQQDAWKCELEALLACGLHGLEDFLN 543 ++V+EK+ + +RL ED++ E S+L++G+G PDL +R + L + +PV GLCDC PFG++I+ ++ GS P + ++ + W+G++PS + L LP + + LT+ D++ SL S + + +K +V+ + WK ELEAL G L FL Sbjct: 223 ILVIEKDGIFNRLREDKFFEIVPSILITGRGFPDLATRVFVSLLRSALEIPVLGLCDCNPFGLSIMLTYKLGSARMPLESLQYAVDIKWVGVRPSQIADLDLPISSFKALTRKDLAVADSLFRSSFIQANDHFKDEVQMWLGDALPWKIELEALHVLGFTFLTSFLQ 389
BLAST of mRNA_M-pyrifera_M_contig81142.18980.1 vs. uniprot
Match: A0A0P1AB95_PLAHL (Type ii dna topoisomerase vi subunit a 2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AB95_PLAHL) HSP 1 Score: 108 bits (270), Expect = 5.900e-25 Identity = 57/175 (32.57%), Postives = 98/175 (56.00%), Query Frame = 1 Query: 28 EVGKGVQRVIVVEKECVMHRLVEDRWPETSGSVLVSGKGMPDLPSRALIHALHTIHHLPVKGLCDCGPFGVAILAVFRYGS-NTPGDGHRFQTPLHWLGLQPSDASILPLPPHTHQTLTKSDVSKTQSLLHDSRLHPS--WKMQVKRYWDQQDAWKCELEALLACGLHGLEDFLN 543 E+ + ++V+EK+ + +RL ED++ + S+LV+GKG PDL +R + L +PV G+CDC PFG++I+ ++ GS P + ++ + W+G++PS S + LP + + L++ DV+ SL+ S + ++ +V + WK ELEAL G L FL Sbjct: 171 ELRSNAKIILVIEKDGIFNRLREDKFFDVVPSILVTGKGFPDLATRVFVSLLSKALRIPVLGVCDCNPFGLSIILTYKLGSARMPLESLQYAVDIKWIGVRPSQISNIALPASSFKVLSRKDVAVANSLMRASFIQADMHFRNEVHMWLGDALPWKIELEALHCLGFTFLTSFLQ 345
BLAST of mRNA_M-pyrifera_M_contig81142.18980.1 vs. uniprot
Match: B7G1L8_PHATC (Type II DNA topoisomerase VI subunit n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G1L8_PHATC) HSP 1 Score: 108 bits (271), Expect = 1.090e-24 Identity = 56/122 (45.90%), Postives = 79/122 (64.75%), Query Frame = 1 Query: 52 VIVVEKECVMHRLVEDRWPETSGSVLVSGKGMPDLPSRALIHALH-TIHHLPVKGLCDCGPFGVAILAVFRYGSNTPGDG-HRFQTPLHWLGLQPSDASILPLPPHTHQTLTKSDVSKTQSL 411 ++V+EKE V +RLVEDR+ + +LV+GKG PDL +RAL+H LH T+ LPV+GLCDC P+GV +L +++ + DG HRF P+ W+GL+PS L P+T +K QSL Sbjct: 228 ILVIEKEGVYNRLVEDRFFDRFPCILVTGKGFPDLSTRALVHVLHHTLGLLPVRGLCDCNPYGVMVLHTYQHTARKGVDGGHRFGVPISWIGLRPSQVQQLQRQPNTKHGQSKLPDQVFQSL 349
BLAST of mRNA_M-pyrifera_M_contig81142.18980.1 vs. uniprot
Match: W2PU68_PHYPN (Apple domain-containing protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PU68_PHYPN) HSP 1 Score: 109 bits (273), Expect = 1.100e-24 Identity = 57/167 (34.13%), Postives = 96/167 (57.49%), Query Frame = 1 Query: 52 VIVVEKECVMHRLVEDRWPETSGSVLVSGKGMPDLPSRALIHALHTIHHLPVKGLCDCGPFGVAILAVFRYGS-NTPGDGHRFQTPLHWLGLQPSDASILPLPPHTHQTLTKSDVSKTQSLLHDSRLHPS--WKMQVKRYWDQQDAWKCELEALLACGLHGLEDFLN 543 ++V+EK+ + +RL ED++ E S+L++G+G PDL +R + L +PV GLCDC PFG++I+ ++ GS P + ++ + W+G++PS + L LP + + LT+ D++ SL S + + +K +V+ + WK ELEAL G L FL Sbjct: 347 ILVIEKDGIFNRLREDKFFEIVPSILITGRGFPDLATRVFVSLLRNALEIPVLGLCDCNPFGLSIMLTYKLGSARMPLESLQYAVDIKWVGVRPSQIADLDLPISSFKALTRKDLAVADSLFRSSFIQANDHFKDEVQMWLGDALPWKIELEALHVLGFTFLTSFLQ 513
BLAST of mRNA_M-pyrifera_M_contig81142.18980.1 vs. uniprot
Match: K0RG96_THAOC (TP6A_N domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RG96_THAOC) HSP 1 Score: 110 bits (274), Expect = 1.190e-24 Identity = 60/131 (45.80%), Postives = 81/131 (61.83%), Query Frame = 1 Query: 34 GKGVQRVIVVEKECVMHRLVEDRWPETSGSVLVSGKGMPDLPSRALIHALHTIHHLPVKGLCDCGPFGVAILAVFRYGSNTPG-DGH-RFQTPLHWLGLQPSDASILP--LPPHTHQTLTKSDVSKTQSLL 414 K + ++V+EKE V +RL E+R + +LV+GKG PDL +RAL+HALH LPV G+CDC PFGV++LA++ Y G DG R+ P+ W+GL+PSD L LP Q LT D + SLL Sbjct: 489 SKDARLIVVIEKEGVYNRLSEERIFDRFPCILVTGKGFPDLATRALVHALHHELELPVVGICDCNPFGVSVLALYCYAGERMGIDGRMRYSVPIEWIGLRPSDVDGLKSELPGTVFQRLTDLDRKRITSLL 619 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81142.18980.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig81142.18980.1 >prot_M-pyrifera_M_contig81142.18980.1 ID=prot_M-pyrifera_M_contig81142.18980.1|Name=mRNA_M-pyrifera_M_contig81142.18980.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=184bp ICAAEIPVIEVGKGVQRVIVVEKECVMHRLVEDRWPETSGSVLVSGKGMPback to top mRNA from alignment at M-pyrifera_M_contig81142:297..848- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig81142.18980.1 ID=mRNA_M-pyrifera_M_contig81142.18980.1|Name=mRNA_M-pyrifera_M_contig81142.18980.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=552bp|location=Sequence derived from alignment at M-pyrifera_M_contig81142:297..848- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig81142:297..848- >mRNA_M-pyrifera_M_contig81142.18980.1 ID=mRNA_M-pyrifera_M_contig81142.18980.1|Name=mRNA_M-pyrifera_M_contig81142.18980.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1104bp|location=Sequence derived from alignment at M-pyrifera_M_contig81142:297..848- (Macrocystis pyrifera P11B4 male)back to top |