mRNA_M-pyrifera_M_contig81083.18968.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig81083.18968.1 vs. uniprot
Match: A0A3M2BJ82_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2BJ82_9BACT) HSP 1 Score: 59.3 bits (142), Expect = 3.990e-10 Identity = 40/60 (66.67%), Postives = 46/60 (76.67%), Query Frame = 1 Query: 22 GGSCNDADLAEPFGTLDIFDVVSFIEAFNAEDPSVDFFSDGAXXXXXXXXXXXXXXSGCP 201 GG C+ AD AEPFGTLD FDV+ F+ F A+DP+ D DG XXXXXXXXXXXXX+GCP Sbjct: 17 GGPCSGADFAEPFGTLDFFDVLGFLSLFTAQDPAADITDDGEFXXXXXXXXXXXXXAGCP 76
BLAST of mRNA_M-pyrifera_M_contig81083.18968.1 vs. uniprot
Match: A0A5M4D8G0_9CYAN (Cytochrome_C554 domain-containing protein n=1 Tax=Cyanobacteria bacterium CYA TaxID=2484221 RepID=A0A5M4D8G0_9CYAN) HSP 1 Score: 62.0 bits (149), Expect = 1.340e-9 Identity = 42/62 (67.74%), Postives = 47/62 (75.81%), Query Frame = 1 Query: 16 ELGGSCNDADLAEPFGTLDIFDVVSFIEAFNAEDPSVDFFSDGAXXXXXXXXXXXXXXSGCP 201 E G CNDAD AEP+GTLD FDV +F++AF+ DPS D DG XXXXXXXXXXXXX GCP Sbjct: 547 EASGPCNDADFAEPYGTLDFFDVQAFLQAFSMHDPSADLTGDGLYXXXXXXXXXXXXXFGCP 608
BLAST of mRNA_M-pyrifera_M_contig81083.18968.1 vs. uniprot
Match: A0A3M2B333_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2B333_9BACT) HSP 1 Score: 62.0 bits (149), Expect = 1.350e-9 Identity = 40/57 (70.18%), Postives = 48/57 (84.21%), Query Frame = 1 Query: 31 CNDADLAEPFGTLDIFDVVSFIEAFNAEDPSVDFFSDGAXXXXXXXXXXXXXXSGCP 201 CNDAD AEPFGTLD FDV++F++AF+ +DP+ D SDG XXXXXXXXXXXX +GCP Sbjct: 640 CNDADFAEPFGTLDFFDVLAFLQAFSNQDPAADINSDGLWXXXXXXXXXXXXSAGCP 696
BLAST of mRNA_M-pyrifera_M_contig81083.18968.1 vs. uniprot
Match: A0A3M2B5Q2_9BACT (VCBS repeat-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2B5Q2_9BACT) HSP 1 Score: 61.2 bits (147), Expect = 2.470e-9 Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 1 Query: 22 GGSCNDADLAEPFGTLDIFDVVSFIEAFNAEDPSVDFFSDGA 147 GG CNDADLA PFGTLD FDV+ F++ F+ +DP+ D DGA Sbjct: 376 GGGCNDADLAMPFGTLDFFDVLEFLQLFSEQDPAADLTGDGA 417
BLAST of mRNA_M-pyrifera_M_contig81083.18968.1 vs. uniprot
Match: A0A7Z9UCF6_9BACT (Choice-of-anchor B family protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9UCF6_9BACT) HSP 1 Score: 58.2 bits (139), Expect = 3.070e-8 Identity = 40/62 (64.52%), Postives = 51/62 (82.26%), Query Frame = 1 Query: 16 ELGGSCNDADLAEPFGTLDIFDVVSFIEAFNAEDPSVDFFSDGAXXXXXXXXXXXXXXSGCP 201 ++ C+DADLAEPFGTL+ FDV +F+ A+N+ D S D +DG+XXXXXXXXXXXXXX+GCP Sbjct: 634 DVAAGCSDADLAEPFGTLNFFDVSAFLSAYNSNDASADLNNDGSXXXXXXXXXXXXXXAGCP 695
BLAST of mRNA_M-pyrifera_M_contig81083.18968.1 vs. uniprot
Match: A0A3M2BDU9_9BACT (Ig-like domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2BDU9_9BACT) HSP 1 Score: 57.0 bits (136), Expect = 7.810e-8 Identity = 40/58 (68.97%), Postives = 45/58 (77.59%), Query Frame = 1 Query: 28 SCNDADLAEPFGTLDIFDVVSFIEAFNAEDPSVDFFSDGAXXXXXXXXXXXXXXSGCP 201 SC AD AEPFGTLD FDV F+ F+A+DP+ D DGA XXXXXXXXXXXXX+GCP Sbjct: 524 SCGPADFAEPFGTLDFFDVAEFLALFSAQDPTADMNHDGAWXXXXXXXXXXXXXAGCP 581
BLAST of mRNA_M-pyrifera_M_contig81083.18968.1 vs. uniprot
Match: A0A2D9CAX2_9BACT (PA14 domain-containing protein n=2 Tax=Phycisphaerae TaxID=666505 RepID=A0A2D9CAX2_9BACT) HSP 1 Score: 57.0 bits (136), Expect = 7.930e-8 Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = 1 Query: 19 LGGSCNDADLAEPFGTLDIFDVVSFIEAFNAEDPSVDFFSDGAXXXXXXXXXXXXXXSGCP 201 L SC+ ADLAEPFG L+ FDV F+ AF+A+ PSVDF +D XXXXXXXXXXXXXX+GCP Sbjct: 997 LSNSCSTADLAEPFGVLNFFDVSEFLTAFSAQSPSVDFNNDXXXXXXXXXXXXXXXXAGCP 1057
BLAST of mRNA_M-pyrifera_M_contig81083.18968.1 vs. uniprot
Match: A0A2E2N617_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E2N617_9BACT) HSP 1 Score: 56.6 bits (135), Expect = 1.080e-7 Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 1 Query: 13 TELGGSCNDADLAEPFGTLDIFDVVSFIEAFNAED 117 T +GGSCNDADLAEPFG LDI DVV+F++AF A D Sbjct: 792 TLVGGSCNDADLAEPFGELDISDVVTFLQAFGAMD 826
BLAST of mRNA_M-pyrifera_M_contig81083.18968.1 vs. uniprot
Match: A0A2D9C6D2_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2D9C6D2_9BACT) HSP 1 Score: 52.8 bits (125), Expect = 4.160e-7 Identity = 42/64 (65.62%), Postives = 48/64 (75.00%), Query Frame = 1 Query: 16 ELGG--SCNDADLAEPFGTLDIFDVVSFIEAFNAEDPSVDFFSDGAXXXXXXXXXXXXXXSGCP 201 E+ G C+DADL EPFG LD FDV +F+ AFN D S DF +G+XXXXXXXXXXXXXX GCP Sbjct: 59 EIAGPSGCSDADLVEPFGQLDFFDVSAFLTAFNNGDSSADFDGNGSXXXXXXXXXXXXXXVGCP 122
BLAST of mRNA_M-pyrifera_M_contig81083.18968.1 vs. uniprot
Match: A0A2A4RQC2_9BACT (MAM domain-containing protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A2A4RQC2_9BACT) HSP 1 Score: 54.7 bits (130), Expect = 5.150e-7 Identity = 38/62 (61.29%), Postives = 48/62 (77.42%), Query Frame = 1 Query: 16 ELGGSCNDADLAEPFGTLDIFDVVSFIEAFNAEDPSVDFFSDGAXXXXXXXXXXXXXXSGCP 201 ++ G C+ ADLAEP+GT + FDV +F++AF+A DP+ D DG XXXXXXXXXXXXX GCP Sbjct: 735 DVQGGCSGADLAEPYGTFNFFDVSAFLQAFDAGDPAADLTGDGLLXXXXXXXXXXXXXIGCP 796 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81083.18968.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig81083.18968.1 >prot_M-pyrifera_M_contig81083.18968.1 ID=prot_M-pyrifera_M_contig81083.18968.1|Name=mRNA_M-pyrifera_M_contig81083.18968.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=68bp RVYGTELGGSCNDADLAEPFGTLDIFDVVSFIEAFNAEDPSVDFFSDGAFback to top mRNA from alignment at M-pyrifera_M_contig81083:137..340+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig81083.18968.1 ID=mRNA_M-pyrifera_M_contig81083.18968.1|Name=mRNA_M-pyrifera_M_contig81083.18968.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=204bp|location=Sequence derived from alignment at M-pyrifera_M_contig81083:137..340+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig81083:137..340+ >mRNA_M-pyrifera_M_contig81083.18968.1 ID=mRNA_M-pyrifera_M_contig81083.18968.1|Name=mRNA_M-pyrifera_M_contig81083.18968.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=408bp|location=Sequence derived from alignment at M-pyrifera_M_contig81083:137..340+ (Macrocystis pyrifera P11B4 male)back to top |