mRNA_M-pyrifera_M_contig81018.18950.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig81018.18950.1 vs. uniprot
Match: A0A5A8EH03_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EH03_CAFRO) HSP 1 Score: 107 bits (266), Expect = 3.610e-27 Identity = 53/121 (43.80%), Postives = 75/121 (61.98%), Query Frame = 1
Query: 13 VPVMLEQPDKLRSGGRTELREEAKARHPVWLIRHEGVGREWRRRVGEVEKMQGPGAALRMRVDRARLAQHQRAPGLPSSFVGLDTFLGREYAIDFEDYLDLPEDAEEAPTVSVHEIFEAKL 375
+P + DKL GG +R E A+HP+ ++ ++W + E++ GPG A+RMR+DRA L+Q QRAPGL S FVGLDT LGR+ + FED LD+PE + P +VH+ + KL
Sbjct: 19 MPALTHPTDKLSRGGLRSMRHEMAAKHPIEAMQEAWHTQKWGNELHHAERVFGPGTAMRMRMDRAILSQFQRAPGLASDFVGLDTILGRDITVGFEDILDVPETRTDTPVETVHDALDRKL 139
BLAST of mRNA_M-pyrifera_M_contig81018.18950.1 vs. uniprot
Match: A0A835YZL3_9STRA (Proteasome maturation factor UMP1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZL3_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 3.980e-18 Identity = 48/124 (38.71%), Postives = 73/124 (58.87%), Query Frame = 1
Query: 1 DVRGVPVMLEQPDKLRSGGRTELREEAKARHPVWLIRHEGVGREWRRRVGEVEKMQGPGAALRMRVDRARLAQHQRAPGLPSSFVGLDTFLGREYAIDFEDYLDLPEDAEEAPTVSVHEIFEAK 372
+ + +PV + D LR G T +++EA+ HPV I+ V E+ ++ +++ G G A+R+R + A L+Q QR PGL SS VGL+T LG + +DFED++ PE+ P VHE E K
Sbjct: 2 EQKSLPVARQPADILRYG-LTSMQQEAQDTHPVEAIQRSRVRGEFELKMDMAQRVYGSGFAMRLRTEAAALSQAQRLPGLLSSRVGLETVLGNDETLDFEDFMGTPENQPGEPKFKVHEAMEIK 124
BLAST of mRNA_M-pyrifera_M_contig81018.18950.1 vs. uniprot
Match: W7TNF3_9STRA (Proteasome maturation factor ump1 family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNF3_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.760e-17 Identity = 47/122 (38.52%), Postives = 75/122 (61.48%), Query Frame = 1
Query: 13 VPVMLEQPDKLRSGGRTE-LREEAKARHPVWLIRHEGVGREWRRRVGEVEKMQGPGAALRMRVDRARLAQHQRAPGLPSSFVGLDTFLGREYAIDFEDYLDLPEDAEEAPTVSVHEIFEAKL 375
+P++ E D++R G + R EA A HPV + E++ R+ + ++ G AA+R++ +R L++ RAPGLPSS VGL+T LG + I+FED L+ P++ + P + VHE EA+L
Sbjct: 9 LPLLKEPVDQMREGLKAGGFRSEAVAPHPVQAFQATRKEAEFQARLDTIARLYGIAAAMRLKTERDILSRVCRAPGLPSSMVGLETVLGTDETIEFEDVLNDPQERPDMPLIPVHERMEARL 130
BLAST of mRNA_M-pyrifera_M_contig81018.18950.1 vs. uniprot
Match: D7FKB2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKB2_ECTSI) HSP 1 Score: 76.6 bits (187), Expect = 2.180e-15 Identity = 43/120 (35.83%), Postives = 67/120 (55.83%), Query Frame = 1
Query: 7 RGVPVMLEQPDKLRSGGRTELREEAKARHPVWLIRHEGVGREWRRRVGEVEKMQGPGAALRMRVDRARLAQHQRAPGLPSSFVGLDTFLGREYAIDFEDYLDLPEDAEEAPTVSVHEIFE 366
+ +P+ D++R G + ++A A HP+ + + E+ ++ K+ G +RM+ + A L+Q Q PGLPSS +GL+T LGR+ ++FEDYLD P D E P VHE E
Sbjct: 7 KAMPMARAPHDQMRFGF-SSFAQDASAGHPLEAMNKARIPNEFDFKMDLAGKVYGSAFVMRMKTEVATLSQAQHLPGLPSSMLGLETVLGRDETVEFEDYLDPPADRPEGPRFRVHEAME 125
BLAST of mRNA_M-pyrifera_M_contig81018.18950.1 vs. uniprot
Match: A0A7S2S4B2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S4B2_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 2.690e-12 Identity = 44/121 (36.36%), Postives = 67/121 (55.37%), Query Frame = 1
Query: 13 VPVMLEQPDKLRSGGRTELREEAKARHPVWLIRHEGVGREWRRRVGEVEKMQGPGAALRMRVDRARLAQHQRAPGLPSSFVGLDTFLGREYAIDFEDYLDLPEDAEEAPTVSVHEIFEAKL 375
+PV+ D++R G +T L E++ HP L V ++ ++V V +M G AA+R++ +R Q QR PGLPSSF+ L T LG + + FED L+ P +A S+H+ E K
Sbjct: 7 IPVLQGPRDQMREGLQTTLAAESRQGHP--LETRLAVD-DFSQKVDMVRRMYGSAAAMRLQTERLATEQIQRLPGLPSSFLALQTVLGEDCTLQFEDVLNDPFEAPVETKASLHDELEFKF 124
BLAST of mRNA_M-pyrifera_M_contig81018.18950.1 vs. uniprot
Match: A0A7S2TZU6_9EUKA (Hypothetical protein n=2 Tax=Lotharella TaxID=74819 RepID=A0A7S2TZU6_9EUKA) HSP 1 Score: 67.4 bits (163), Expect = 9.710e-12 Identity = 45/130 (34.62%), Postives = 72/130 (55.38%), Query Frame = 1
Query: 1 DVRGVPVMLEQPDKLRSGGRTELREEAKARHPVWLIRHEGVGREWRRRVGEVEKMQGPGAALRMRVDRARLAQHQR--APGLPSSFVGLDTFLGREYAIDFEDYLDLPEDAEEAPTVSVHEIFEAKLSAK 384
D + +P++ E D LR+ + + A HPV LI+ E ++ + K+ G +RM++D+ L+QH+R PG+ SFVGL+T LG + I+FEDYL+ PE +E+ V +H E + K
Sbjct: 10 DRKSIPILREPLDTLRT---KKTSVDNSASHPVQLIQEEHNVNIAEGKMRMLAKIHGVHVPMRMKMDQTILSQHKRLHVPGMKPSFVGLETMLGMDETIEFEDYLNDPEFSEKQ--VDIHTEMEKSMFPK 134
BLAST of mRNA_M-pyrifera_M_contig81018.18950.1 vs. uniprot
Match: A0A7S2WII9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WII9_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 4.110e-9 Identity = 38/99 (38.38%), Postives = 57/99 (57.58%), Query Frame = 1
Query: 13 VPVMLEQPDKLRSGGRTELREEAKARHPVWLIRHEGVGREWRRRVGEVEKMQGPGAALRMRVDRARLAQHQRAPGLPSSFVGLDTFLGREYAIDFEDYL 309
+PV+ D++R G +T L E++ HP L V ++ ++V V +M G AA+R++ +R Q QR PGLPSSF+ L T LG + + FED L
Sbjct: 7 IPVLQGPRDQMREGLQTTLAAESRQGHP--LETRLAVD-DFSQKVDMVRRMYGSAAAMRLQTERLATEQIQRLPGLPSSFLALQTVLGEDCTLQFEDVL 102
BLAST of mRNA_M-pyrifera_M_contig81018.18950.1 vs. uniprot
Match: A0A7S0CMP6_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CMP6_9EUKA) HSP 1 Score: 59.7 bits (143), Expect = 7.310e-9 Identity = 45/127 (35.43%), Postives = 70/127 (55.12%), Query Frame = 1
Query: 1 DVRGVPVMLEQPDKLRSGGRTELREEAKARHPVWLIRHEGVGREWRRRVGEVEKMQGPGAALRMRVDRARLAQHQRAP--GLPSSFVGLDTFLGREYAIDFEDYLDLPEDAEEAPTVSVHEIFEAKL 375
D + VP++ D LR+ +T A++ HPV I+ E ++ + K+ G +RM++D+ LAQH+R P G+ SSFVGL+T LG + I+FED+L+ E E+ + VH E K
Sbjct: 4 DGKSVPLLRTPIDVLRT--KTNTVNSARS-HPVHAIQEEHNVNIREGKMRMLAKIHGVHVPMRMKMDQTILAQHRRLPLPGMKSSFVGLETMLGVDENIEFEDFLNKQEFCEKE--IDVHTELEKKF 125
BLAST of mRNA_M-pyrifera_M_contig81018.18950.1 vs. uniprot
Match: A0A8J2A855_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J2A855_9DINO) HSP 1 Score: 57.4 bits (137), Expect = 6.920e-8 Identity = 34/76 (44.74%), Postives = 47/76 (61.84%), Query Frame = 1
Query: 169 GPGAALRMRVDRARLAQHQRAPGLPSSFVGLDTFLGREYAIDFEDYLDLPEDAEEAPTV----SVHEIFEAKLSAK 384
G +R R++R LAQ+QR PGLPSSFVGL++ L + I+FEDYL+ E P V ++H++ E KL K
Sbjct: 63 GSHVPMRNRIERNILAQYQRLPGLPSSFVGLESHLDIDETIEFEDYLNRKETCP-MPEVGFNHTMHDVLEKKLEMK 137
BLAST of mRNA_M-pyrifera_M_contig81018.18950.1 vs. uniprot
Match: A0A7S3I146_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Favella ehrenbergii TaxID=182087 RepID=A0A7S3I146_9SPIT) HSP 1 Score: 57.0 bits (136), Expect = 8.980e-8 Identity = 31/81 (38.27%), Postives = 50/81 (61.73%), Query Frame = 1
Query: 91 HPVWLIRHEGVGREWRRRVGEVEKMQGPGAALRMRVDRARLAQHQRAPGLPSSFVGLDTFLGREYAIDFEDYLDLPEDAEE 333
HPV I+ + + + + + + G +R++++ L+Q R PG+ SS VGL+T LGR+ IDFEDYL LPE++E+
Sbjct: 9 HPVETIQKDWLRNQLENKHYVMGNVYGTHLPMRLKMETNILSQVSRLPGIRSSHVGLNTILGRDETIDFEDYLGLPENSEQ 89 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81018.18950.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig81018.18950.1 >prot_M-pyrifera_M_contig81018.18950.1 ID=prot_M-pyrifera_M_contig81018.18950.1|Name=mRNA_M-pyrifera_M_contig81018.18950.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=122bp MLEQPDKLRSGGRTELREEAKARHPVWLIRHEGVGREWRRRVGEVEKMQGback to top mRNA from alignment at M-pyrifera_M_contig81018:77..463- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig81018.18950.1 ID=mRNA_M-pyrifera_M_contig81018.18950.1|Name=mRNA_M-pyrifera_M_contig81018.18950.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=387bp|location=Sequence derived from alignment at M-pyrifera_M_contig81018:77..463- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig81018:77..463- >mRNA_M-pyrifera_M_contig81018.18950.1 ID=mRNA_M-pyrifera_M_contig81018.18950.1|Name=mRNA_M-pyrifera_M_contig81018.18950.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=732bp|location=Sequence derived from alignment at M-pyrifera_M_contig81018:77..463- (Macrocystis pyrifera P11B4 male)back to top |