mRNA_M-pyrifera_M_contig78965.18553.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig78965.18553.1 vs. uniprot
Match: A0A5A8C5H9_CAFRO (PALP domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C5H9_CAFRO) HSP 1 Score: 114 bits (284), Expect = 5.400e-28 Identity = 59/97 (60.82%), Postives = 71/97 (73.20%), Query Frame = 1 Query: 19 GKTPLLRLRSLDEVVGARLLGKAEFLSVGGSVKDRAAAFMVLGAEQDGRLPRGGGGVVVEATGGNTGVSLVLAAHARGHKTVMAVPSGISKGKIDLM 309 GKTPLL +RSL + G R++ KAE L+ GGSVKDR AA ++L AEQ G LP GGGG VVE TGGNTGV + + A ARGH+ V+ +P ISK KI LM Sbjct: 60 GKTPLLEIRSLSDATGCRIVAKAEHLNPGGSVKDRPAARIILLAEQRGDLPAGGGGTVVEGTGGNTGVGMAMVAAARGHRAVLVMPDSISKDKIALM 156
BLAST of mRNA_M-pyrifera_M_contig78965.18553.1 vs. uniprot
Match: A0A5A8CA53_CAFRO (PALP domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CA53_CAFRO) HSP 1 Score: 114 bits (284), Expect = 3.220e-27 Identity = 59/97 (60.82%), Postives = 71/97 (73.20%), Query Frame = 1 Query: 19 GKTPLLRLRSLDEVVGARLLGKAEFLSVGGSVKDRAAAFMVLGAEQDGRLPRGGGGVVVEATGGNTGVSLVLAAHARGHKTVMAVPSGISKGKIDLM 309 GKTPLL +RSL + G R++ KAE L+ GGSVKDR AA ++L AEQ G LP GGGG VVE TGGNTGV + + A ARGH+ V+ +P ISK KI LM Sbjct: 60 GKTPLLEIRSLSDATGCRIVAKAEHLNPGGSVKDRPAARIILLAEQRGDLPAGGGGTVVEGTGGNTGVGMAMVAAARGHRAVLVMPDSISKDKIALM 156
BLAST of mRNA_M-pyrifera_M_contig78965.18553.1 vs. uniprot
Match: K9SHG7_9CYAN (Cysteine synthase n=1 Tax=Pseudanabaena sp. PCC 7367 TaxID=82654 RepID=K9SHG7_9CYAN) HSP 1 Score: 105 bits (263), Expect = 2.810e-25 Identity = 54/98 (55.10%), Postives = 72/98 (73.47%), Query Frame = 1 Query: 19 GKTPLLRLRSLDEVVGARLLGKAEFLSVGGSVKDRAAAFMVLGAEQDGRLPRGGGGVVVEATGGNTGVSLVLAAHARGHKTVMAVPSGISKGKIDLMR 312 G TPL+++ SL G +LGKAEFL+ GGSVKDRAA FMV+ AEQDG L GG +VE T GNTG+ L L A+ARG+++++ +P+ S+ KIDL+R Sbjct: 14 GNTPLIKIESLSAATGCNILGKAEFLNPGGSVKDRAALFMVMQAEQDGLLKPGG--AIVEGTAGNTGIGLTLVANARGYRSIIVMPNNQSQEKIDLLR 109
BLAST of mRNA_M-pyrifera_M_contig78965.18553.1 vs. uniprot
Match: UPI00167FEEE3 (cysteine synthase A n=1 Tax=Pseudanabaena sp. FACHB-723 TaxID=2692860 RepID=UPI00167FEEE3) HSP 1 Score: 105 bits (261), Expect = 5.500e-25 Identity = 55/103 (53.40%), Postives = 73/103 (70.87%), Query Frame = 1 Query: 4 FEQGDGKTPLLRLRSLDEVVGARLLGKAEFLSVGGSVKDRAAAFMVLGAEQDGRLPRGGGGVVVEATGGNTGVSLVLAAHARGHKTVMAVPSGISKGKIDLMR 312 F + G TPL+++ SL E G +LGKAEFL+ GGSVKDRAA +MVL AE+ G L GG +VE T GNTG+ L L A+ARG++ V+ +P+ S+ KIDL+R Sbjct: 9 FTESVGNTPLIKIESLSEATGCTILGKAEFLNPGGSVKDRAALYMVLEAERTGALKAGG--TIVEGTAGNTGIGLSLVANARGYRAVIVMPNNQSQEKIDLLR 109
BLAST of mRNA_M-pyrifera_M_contig78965.18553.1 vs. uniprot
Match: K9SUV2_9SYNE (Cysteine synthase n=1 Tax=Synechococcus sp. PCC 7502 TaxID=1173263 RepID=K9SUV2_9SYNE) HSP 1 Score: 103 bits (258), Expect = 1.480e-24 Identity = 55/103 (53.40%), Postives = 72/103 (69.90%), Query Frame = 1 Query: 4 FEQGDGKTPLLRLRSLDEVVGARLLGKAEFLSVGGSVKDRAAAFMVLGAEQDGRLPRGGGGVVVEATGGNTGVSLVLAAHARGHKTVMAVPSGISKGKIDLMR 312 F G TPL+ + SL + G ++LGKAEFL+ GGSVKDRAA FMV AE+DG+L GG +VE T GNTG+ L L A+A+G++ V+ +PS S KIDL+R Sbjct: 9 FAGAIGNTPLIEIPSLSAITGCKILGKAEFLNPGGSVKDRAALFMVEQAEKDGKLKAGG--TIVEGTAGNTGIGLALVANAKGYRCVIVMPSNQSPEKIDLLR 109
BLAST of mRNA_M-pyrifera_M_contig78965.18553.1 vs. uniprot
Match: A0A8I1R984_9BURK (Cysteine synthase A n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A8I1R984_9BURK) HSP 1 Score: 103 bits (258), Expect = 1.510e-24 Identity = 55/98 (56.12%), Postives = 71/98 (72.45%), Query Frame = 1 Query: 19 GKTPLLRLRSLDEVVGARLLGKAEFLSVGGSVKDRAAAFMVLGAEQDGRLPRGGGGVVVEATGGNTGVSLVLAAHARGHKTVMAVPSGISKGKIDLMR 312 G TPL+RLR E+ G +LGKAEFL+ GGSVKDRA +M+L AEQ G L GG +VVE T GNTG+ L L A+ARG++TV+ +P+ S+ K DL+R Sbjct: 13 GNTPLIRLRKASELTGCEILGKAEFLNPGGSVKDRAGLYMILDAEQRGVLRPGG--IVVEGTAGNTGIGLTLVANARGYRTVIVIPATQSQEKKDLLR 108
BLAST of mRNA_M-pyrifera_M_contig78965.18553.1 vs. uniprot
Match: UPI001BA900C8 (cysteine synthase A n=1 Tax=Roseomonas arctica TaxID=1509237 RepID=UPI001BA900C8) HSP 1 Score: 103 bits (257), Expect = 2.080e-24 Identity = 52/103 (50.49%), Postives = 71/103 (68.93%), Query Frame = 1 Query: 4 FEQGDGKTPLLRLRSLDEVVGARLLGKAEFLSVGGSVKDRAAAFMVLGAEQDGRLPRGGGGVVVEATGGNTGVSLVLAAHARGHKTVMAVPSGISKGKIDLMR 312 F G TPL+RLR E G +LGKAEF++ GGSVKDRAA ++ AE+DGRL G GV+VE T GNTG+ + L A+ARG+++++ +P S+ KID +R Sbjct: 9 FAGAVGNTPLIRLRRASEATGCEILGKAEFMNPGGSVKDRAALGIIEAAERDGRLTPGKPGVIVEGTAGNTGIGITLVANARGYRSIIVMPETQSREKIDFLR 111
BLAST of mRNA_M-pyrifera_M_contig78965.18553.1 vs. uniprot
Match: A0A0L0DSI2_THETB (Cysteine synthase n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DSI2_THETB) HSP 1 Score: 104 bits (259), Expect = 2.080e-24 Identity = 54/104 (51.92%), Postives = 70/104 (67.31%), Query Frame = 1 Query: 1 SFEQGDGKTPLLRLRSLDEVVGARLLGKAEFLSVGGSVKDRAAAFMVLGAEQDGRLPRGGGGVVVEATGGNTGVSLVLAAHARGHKTVMAVPSGISKGKIDLMR 312 +FEQ G+TPLLRLR E G + KAE+ + GGSVKDR A M+LGAE+DG L RG GV+VE T GNTG+ L LA A G+K ++ + S S+ K D++R Sbjct: 26 AFEQAVGQTPLLRLRGASEAAGCNVYAKAEYANPGGSVKDRPALSMILGAERDGHLVRGEEGVIVEGTAGNTGIGLALAGRALGYKVLICIASSQSQEKKDMLR 129
BLAST of mRNA_M-pyrifera_M_contig78965.18553.1 vs. uniprot
Match: L8MWJ1_9CYAN (Cysteine synthase n=15 Tax=Pseudanabaena TaxID=1152 RepID=L8MWJ1_9CYAN) HSP 1 Score: 103 bits (256), Expect = 2.950e-24 Identity = 54/103 (52.43%), Postives = 72/103 (69.90%), Query Frame = 1 Query: 4 FEQGDGKTPLLRLRSLDEVVGARLLGKAEFLSVGGSVKDRAAAFMVLGAEQDGRLPRGGGGVVVEATGGNTGVSLVLAAHARGHKTVMAVPSGISKGKIDLMR 312 F G TPL+++ SL E G +LGKAE L+ GGSVKDRAA FMVL AE+ G + GG +VE T GNTG+ L L A+ARG+++V+ +PS S+ KIDL++ Sbjct: 9 FANSVGNTPLIKIESLSEATGCTILGKAELLNPGGSVKDRAALFMVLEAEKAGTIKAGG--TIVEGTAGNTGIGLALVANARGYRSVIVMPSNQSQEKIDLLK 109
BLAST of mRNA_M-pyrifera_M_contig78965.18553.1 vs. uniprot
Match: A0A6A4YYQ6_9STRA (PALP domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YYQ6_9STRA) HSP 1 Score: 100 bits (248), Expect = 4.850e-24 Identity = 52/98 (53.06%), Postives = 69/98 (70.41%), Query Frame = 1 Query: 19 GKTPLLRLRSLDEVVGARLLGKAEFLSVGGSVKDRAAAFMVLGAEQDGRLPRGGGGVVVEATGGNTGVSLVLAAHARGHKTVMAVPSGISKGKIDLMR 312 G TPLL ++SL + G R+L KAEF++ GSVKDRAA F++ AE G+L GG +VVEATGGNTGV L + A A+G++T+ +P S KIDLM+ Sbjct: 44 GNTPLLEIKSLSNLTGCRILAKAEFMNPSGSVKDRAAKFLIEDAEASGQLQPGG--IVVEATGGNTGVGLAIVAAAKGYRTIFTMPDKTSAEKIDLMK 139 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78965.18553.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig78965.18553.1 >prot_M-pyrifera_M_contig78965.18553.1 ID=prot_M-pyrifera_M_contig78965.18553.1|Name=mRNA_M-pyrifera_M_contig78965.18553.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=104bp SFEQGDGKTPLLRLRSLDEVVGARLLGKAEFLSVGGSVKDRAAAFMVLGAback to top mRNA from alignment at M-pyrifera_M_contig78965:666..977+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig78965.18553.1 ID=mRNA_M-pyrifera_M_contig78965.18553.1|Name=mRNA_M-pyrifera_M_contig78965.18553.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=312bp|location=Sequence derived from alignment at M-pyrifera_M_contig78965:666..977+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig78965:666..977+ >mRNA_M-pyrifera_M_contig78965.18553.1 ID=mRNA_M-pyrifera_M_contig78965.18553.1|Name=mRNA_M-pyrifera_M_contig78965.18553.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=624bp|location=Sequence derived from alignment at M-pyrifera_M_contig78965:666..977+ (Macrocystis pyrifera P11B4 male)back to top |