mRNA_M-pyrifera_M_contig78658.18488.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig78658.18488.1 vs. uniprot
Match: A0A812SXU1_9DINO (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812SXU1_9DINO) HSP 1 Score: 241 bits (615), Expect = 5.190e-74 Identity = 126/223 (56.50%), Postives = 159/223 (71.30%), Query Frame = 1 Query: 1 GKTMATPAVRRVARENNVDLSIVPGSGKDGRVMKEDVLAFVRGDLAPLDAKELASIDTPTSAPPTQAPPSVPTTAEDQVVPIRGLERAMVKSMTHAWATPHFGYSDEVLMDNLIELRTDLKEMAAAEGVKLSYLPIILKAISLGLREFPELNATVSPDLSEKVIRGSHNIGVAIDSPRGLIVPNVKDVQERSVFEIARELMRLQELAQDGKLAESDLSGGTFT 669 GK +ATPAVRR+AREN VDL+ VP +GKDGRV+K DV+AF+ GD+A LD A A +P D+ PI+GL+R MVK+M AWA PHFGY+DEV MD L+ LR LK A A G KLS++P I+KA+SL L+++P+LNA V+ D +E I+G+HNIGVAIDSPRGLIVPN+K VQ S+FE+A EL RL + AQ GK++ DL GGTFT Sbjct: 192 GKVLATPAVRRIARENGVDLATVPATGKDGRVLKSDVMAFLAGDVAALDTSAGAPXXXXXXXXXVGA--GIPA---DETRPIKGLQRTMVKTMNTAWAVPHFGYADEVQMDALMALRASLKPAAEARGTKLSFMPFIIKAVSLALKQYPDLNAAVNSDETEVTIKGAHNIGVAIDSPRGLIVPNIKGVQNLSIFEVAAELNRLIDAAQAGKVSPEDLKGGTFT 409
BLAST of mRNA_M-pyrifera_M_contig78658.18488.1 vs. uniprot
Match: D2V498_NAEGR (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V498_NAEGR) HSP 1 Score: 229 bits (583), Expect = 3.410e-69 Identity = 118/225 (52.44%), Postives = 162/225 (72.00%), Query Frame = 1 Query: 1 GKTMATPAVRRVARENNVDLSIVPGSGKDGRVMKEDVLAFVRGDLAPLD--AKELASIDTPTSAPPTQAPPSVPTTAEDQVVPIRGLERAMVKSMTHAWATPHFGYSDEVLMDNLIELRTDLKEMAAAEGVKLSYLPIILKAISLGLREFPELNATVSPDLSEKVIRGSHNIGVAIDSPRGLIVPNVKDVQERSVFEIARELMRLQELAQDGKLAESDLSGGTFT 669 GKT+ TPAVRR+ARENN+DL+ V +G++GRV+KEDVL+++ + ++++A++ T T A PS P D+ P+RGL R M+K+M A PHFGY DEV +DNL+ LR LK+ A +GVKLSY+P I+KA+SL L+E+P LN+++S D SE + +G HNIGVA+D+P GL+VPN+K VQ +S+ EIA EL RLQEL + GKL +DL GGTFT Sbjct: 195 GKTLTTPAVRRIARENNIDLTKVQATGRNGRVLKEDVLSYLENPTKHTEKQSEKVAAVPEQT----TTAAPSTPVVG-DRREPVRGLMRTMIKTMNAATKVPHFGYKDEVYVDNLMTLRNHLKKTAERQGVKLSYMPFIIKAVSLALKEYPVLNSSLSEDESEIIYKGEHNIGVAMDTPNGLLVPNIKSVQNKSILEIAAELNRLQELGKQGKLGSNDLRGGTFT 414
BLAST of mRNA_M-pyrifera_M_contig78658.18488.1 vs. uniprot
Match: L8HLE5_ACACA (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HLE5_ACACA) HSP 1 Score: 227 bits (579), Expect = 8.090e-69 Identity = 121/241 (50.21%), Postives = 166/241 (68.88%), Query Frame = 1 Query: 1 GKTMATPAVRRVARENNVDLSIVPGSGKDGRVMKEDVLAFVRGDLAPLDAKELASIDTPTSAPPTQAPPSVP------------------TTAEDQVVPIRGLERAMVKSMTHAWATPHFGYSDEVLMDNLIELRTDLKEMAAAEGVKLSYLPIILKAISLGLREFPELNATVSPDLSEKVIRGSHNIGVAIDSPRGLIVPNVKDVQERSVFEIARELMRLQELAQDGKLAESDLSGGTFT 669 G + TPAVRR+A+EN++DLS V G+G+DGRV+KEDVLA++ G A ++ T A P PPS D+ V IRGL+RAMVK+MT A PHFGYSDE+++D ++ LR +LK +A A GVKLSY+P ILKAISL L+ +P LN++V+ D+S+ + + SHN+GVA+D+P+GLIVPN+KDVQ ++FEIA+EL RLQ L ++G+L + DL+GGTFT Sbjct: 154 GPVLTTPAVRRIAKENSIDLSKVAGTGRDGRVLKEDVLAYLEGSPLAHQAPPQFALPTAAGAVP-PLPPSXXXXXXXEAGGLAHVVARKAVVGADREVEIRGLQRAMVKTMTAANQIPHFGYSDEIVVDQMVALRDELKPIAEARGVKLSYMPFILKAISLALKSYPVLNSSVNADVSKIIYKASHNLGVAMDTPQGLIVPNIKDVQVLTIFEIAQELNRLQRLGKEGRLGKEDLTGGTFT 393
BLAST of mRNA_M-pyrifera_M_contig78658.18488.1 vs. uniprot
Match: UPI001CFDD8C6 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFDD8C6) HSP 1 Score: 226 bits (577), Expect = 4.350e-68 Identity = 115/223 (51.57%), Postives = 156/223 (69.96%), Query Frame = 1 Query: 1 GKTMATPAVRRVARENNVDLSIVPGSGKDGRVMKEDVLAFVRGDLAPLDAKELASIDTPTSAPPTQAPPSVPTTAEDQVVPIRGLERAMVKSMTHAWATPHFGYSDEVLMDNLIELRTDLKEMAAAEGVKLSYLPIILKAISLGLREFPELNATVSPDLSEKVIRGSHNIGVAIDSPRGLIVPNVKDVQERSVFEIARELMRLQELAQDGKLAESDLSGGTFT 669 GK + TPAVRR+AREN++DL+ V +G++GRV+KEDVL++++ A E T + P + + T A+D+ P+RGL R M+K+M A PHFGY DE+ MDNLI LR LK+MA +GVKLSY+P I+KA+SL L E+P LN+++S D +E + + HNIGVA+D+P GL+VPN+K VQ +S+ EIA EL RLQEL + GKL DL GGTFT Sbjct: 213 GKVLTTPAVRRLARENSIDLTKVQPTGRNGRVLKEDVLSYLQDPSAQSKKTEKQPTPTIATTPSVTSAATTTTVAQDRREPVRGLMRTMIKTMNAATKVPHFGYKDEICMDNLIVLRQHLKKMAEKQGVKLSYMPFIIKAVSLALNEYPVLNSSLSEDETEIIYKADHNIGVAMDTPNGLLVPNIKRVQNKSIMEIAAELNRLQELGKQGKLGMDDLKGGTFT 435
BLAST of mRNA_M-pyrifera_M_contig78658.18488.1 vs. uniprot
Match: D0E7R6_NAEGR (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D0E7R6_NAEGR) HSP 1 Score: 224 bits (572), Expect = 6.510e-68 Identity = 114/223 (51.12%), Postives = 162/223 (72.65%), Query Frame = 1 Query: 1 GKTMATPAVRRVARENNVDLSIVPGSGKDGRVMKEDVLAFVRGDLAPLDAKELASIDTPTSAPPTQAPPSVPTTAEDQVVPIRGLERAMVKSMTHAWATPHFGYSDEVLMDNLIELRTDLKEMAAAEGVKLSYLPIILKAISLGLREFPELNATVSPDLSEKVIRGSHNIGVAIDSPRGLIVPNVKDVQERSVFEIARELMRLQELAQDGKLAESDLSGGTFT 669 GK + TPAVRR+ARENN+DL+ VP +G++GRV+KEDVL+++ ++++A + ++A PS PT D+ P+RGL R M+++M A PHFGY DEV +DNL+ +R+ LK+ A +GVKLSY+P I+KA+SL L+E+P LN++++ D SE + +G HNIGVA+D+P GL+VPN+K VQ +S+ EIA EL RLQEL + GKL +DL GGTFT Sbjct: 160 GKILTTPAVRRIARENNLDLTKVPATGRNGRVLKEDVLSYLENPTKQ-QSEKVAVPEQTSTATTXXXXPSTPTVG-DRREPVRGLMRTMIRTMNAATKVPHFGYKDEVYVDNLMIIRSHLKKTAERQGVKLSYMPFIIKAVSLALKEYPILNSSLTEDESEIIYKGDHNIGVAMDTPNGLLVPNIKSVQNKSILEIAAELNRLQELGKQGKLGANDLKGGTFT 380
BLAST of mRNA_M-pyrifera_M_contig78658.18488.1 vs. uniprot
Match: A0A673AYG5_9TELE (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673AYG5_9TELE) HSP 1 Score: 222 bits (565), Expect = 3.580e-67 Identity = 122/226 (53.98%), Postives = 154/226 (68.14%), Query Frame = 1 Query: 4 KTMATPAVRRVARENNVDLSIVPGSGKDGRVMKEDVLAFVRGDL-APLDAKELASIDTPTSAPPTQAPPSVPT---TAEDQVVPIRGLERAMVKSMTHAWATPHFGYSDEVLMDNLIELRTDLKEMAAAEGVKLSYLPIILKAISLGLREFPELNATVSPDLSEKVIRGSHNIGVAIDSPRGLIVPNVKDVQERSVFEIARELMRLQELAQDGKLAESDLSGGTFT 669 KT ATPAVRR+A ENN+ LS V GSGKDGR++KED+L F+ A L I TP +APP A PS P T +D++ P++G RAMVK+MT A PHFGY DEV + L++LR+DLK + GVKLSY+P +KA SLGL FP LNA+V + SHN+GVA+D+ +GL+VPNVK+VQ SVF+IA+EL RLQ L G+L +DLSGGTFT Sbjct: 127 KTQATPAVRRLAMENNIKLSEVVGSGKDGRILKEDILNFLSKQTGAILPPAPFQDIRTPPTAPPPSAAPSPPAPVFTGKDRMEPLKGFHRAMVKTMTAALQIPHFGYCDEVDLSQLVQLRSDLKSTSEGRGVKLSYMPFFIKAASLGLLHFPILNASVDEGCQNITYKASHNVGVAMDTSQGLLVPNVKNVQLLSVFDIAQELNRLQTLGAAGQLGAADLSGGTFT 352
BLAST of mRNA_M-pyrifera_M_contig78658.18488.1 vs. uniprot
Match: A0A5A8C5U6_CAFRO (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C5U6_CAFRO) HSP 1 Score: 220 bits (561), Expect = 2.780e-66 Identity = 127/236 (53.81%), Postives = 151/236 (63.98%), Query Frame = 1 Query: 7 TMATPAVRRVARENNVDLSIVPGSGKDGRVMKEDVLAFVR-GDLAPLDAKELASIDTPTSAPPTQAPPSVPT---------------TAEDQVVPIRGLERAMVKSMTHAWATPHFGYSDEVLMDNLIELRTDLKEMAAAEGVKLSYLPIILKAISLGLREFPELNATVSPDLSEKVIRGSHNIGVAIDSPRGLIVPNVKDVQERSVFEIARELMRLQELAQDGKLAESDLSGGTF 666 T+A PAVRR+ARE+NVDLS+VPG+GKDGRV+K D+LAFV G AP A + +T A D P+RGL RAM KSMT AWA PHFGY DEV MD LR LK +AA GVK S++PI+LKAIS+ L + P LNA V+ D S ++GSHNIGVA+D+PRGLIVPNVKDVQ RS+ E+A EL RLQ LA G+L E DL GTF Sbjct: 142 TLAAPAVRRIAREHNVDLSLVPGTGKDGRVLKGDILAFVESGGKAPAAAAAPKAAETARXXXXXXXXXXXXXXXXXXXXXXXXXAGFAAADVDEPLRGLRRAMAKSMTAAWAVPHFGYCDEVEMDAAAALRAQLKPLAAERGVKFSFMPILLKAISIALLDAPGLNAWVNEDCSTLTLKGSHNIGVAMDTPRGLIVPNVKDVQARSLMEVASELTRLQALAAAGQLGEEDLRDGTF 377
BLAST of mRNA_M-pyrifera_M_contig78658.18488.1 vs. uniprot
Match: A0A6A5BA94_NAEFO (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BA94_NAEFO) HSP 1 Score: 221 bits (563), Expect = 5.110e-66 Identity = 118/226 (52.21%), Postives = 158/226 (69.91%), Query Frame = 1 Query: 4 KTMATPAVRRVARENNVDLSIVPGSGKDGRVMKEDVLAFVRGDLAPLDAKELASIDTPTSAPPTQAPPSVPTTA----EDQVVPIRGLERAMVKSMTHAWATPHFGYSDEVLMDNLIELRTDLKEMAAAEGVKLSYLPIILKAISLGLREFPELNATVSPDLSEKVIRGSHNIGVAIDSPRGLIVPNVKDVQERSVFEIARELMRLQELAQDGKLAESDLSGGTFT 669 K + TPAVRR+ARENN+DL+ V +G++GRV+KEDVL++++ A + I+ + P A PSV TA +++ P+RGL R M+K+M A PHFGY DEV +DNLI LR LK+MA +GVKLSY+P I+KA+SL L E+P LN+++S D SE + + HNIGVA+D+P GL+VPN+K VQ +S+ EIA EL RLQEL + GKL DL GGTFT Sbjct: 214 KVLTTPAVRRLARENNIDLTKVRPTGRNGRVLKEDVLSYLQDPSA-----QSKVIEKQPTTPAVSATPSVTATATTVAQERREPVRGLMRTMIKTMNAATKVPHFGYKDEVCVDNLIVLRQHLKKMAEKQGVKLSYMPFIIKAVSLALNEYPILNSSLSEDESEIIYKADHNIGVAMDTPNGLLVPNIKRVQTKSIMEIAAELNRLQELGKQGKLGMDDLKGGTFT 434
BLAST of mRNA_M-pyrifera_M_contig78658.18488.1 vs. uniprot
Match: A0A090LHD6_STRRB (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Strongyloides ratti TaxID=34506 RepID=A0A090LHD6_STRRB) HSP 1 Score: 218 bits (555), Expect = 1.270e-65 Identity = 110/223 (49.33%), Postives = 158/223 (70.85%), Query Frame = 1 Query: 1 GKTMATPAVRRVARENNVDLSIVPGSGKDGRVMKEDVLAFVRGDLAPLDAKELASIDTPTSAPPTQAPPSVPTTAEDQVVPIRGLERAMVKSMTHAWATPHFGYSDEVLMDNLIELRTDLKEMAAAEGVKLSYLPIILKAISLGLREFPELNATVSPDLSEKVIRGSHNIGVAIDSPRGLIVPNVKDVQERSVFEIARELMRLQELAQDGKLAESDLSGGTFT 669 GK +ATPAVRR+A ENN+DL+ V GSG++GR+MKEDVL F+ G++ PL+ P + T ED+VVPIRG RAMVK+M+ A PHFGY+DE +D L+E+R DLKE++ +G+KLSY+P+ +KA SL L ++P LNATV +L + + SHNI +A+D+P GL+VPN+K+ +++++FEIA +LM+L E + ++ + DLSGGTFT Sbjct: 148 GKVLATPAVRRIAWENNIDLTTVNGSGRNGRIMKEDVLRFL-GEIPPLEE------------PKEEISKKSIITGEDKVVPIRGYTRAMVKTMSQALNVPHFGYNDEFYVDKLVEMRKDLKEISKEKGIKLSYMPMFIKACSLALLKYPSLNATVDENLENVIYKSSHNICLAMDTPGGLVVPNIKNCEQKTIFEIAEDLMKLHESGKKQQIRKEDLSGGTFT 357
BLAST of mRNA_M-pyrifera_M_contig78658.18488.1 vs. uniprot
Match: A0A8C1YS75_CYPCA (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1YS75_CYPCA) HSP 1 Score: 217 bits (553), Expect = 5.650e-65 Identity = 118/231 (51.08%), Postives = 161/231 (69.70%), Query Frame = 1 Query: 4 KTMATPAVRRVARENNVDLSIVPGSGKDGRVMKEDVLAFVR---GDLAPLDAKELASI--DTPTSAP-PTQAPPSVPT---TAEDQVVPIRGLERAMVKSMTHAWATPHFGYSDEVLMDNLIELRTDLKEMAAAEGVKLSYLPIILKAISLGLREFPELNATVSPDLSEKVIRGSHNIGVAIDSPRGLIVPNVKDVQERSVFEIARELMRLQELAQDGKLAESDLSGGTFT 669 KT ATPAVRR+A ENN+ LS V G+GKDGR++KED+++F+ G + P + ++ S DTP P APP++P T +D+ P+ G ++AMVK+MT A PHFGY DEV + L++LR++LK++A + GVKLSY+P +KA SLGL +FP LNA+V + SHNIG+A+D+P+GL+VPNVK VQ SVF+IA EL RLQ L G+L +DL+GGTFT Sbjct: 160 KTQATPAVRRLAMENNIKLSEVVGTGKDGRILKEDIISFLAKQTGAILPYEVQKTPSPTEDTPPKEKTPIMAPPAIPRPVFTWKDRTEPLNGFQKAMVKTMTAALKIPHFGYCDEVDLTQLVQLRSELKDLAESRGVKLSYMPFFIKAASLGLLQFPILNASVDEGCQNITFKASHNIGLAMDTPQGLLVPNVKSVQALSVFDIAVELNRLQALGSAGQLGTADLTGGTFT 390 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78658.18488.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig78658.18488.1 >prot_M-pyrifera_M_contig78658.18488.1 ID=prot_M-pyrifera_M_contig78658.18488.1|Name=mRNA_M-pyrifera_M_contig78658.18488.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=221bp MATPAVRRVARENNVDLSIVPGSGKDGRVMKEDVLAFVRGDLAPLDAKELback to top mRNA from alignment at M-pyrifera_M_contig78658:60..909- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig78658.18488.1 ID=mRNA_M-pyrifera_M_contig78658.18488.1|Name=mRNA_M-pyrifera_M_contig78658.18488.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=850bp|location=Sequence derived from alignment at M-pyrifera_M_contig78658:60..909- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig78658:60..909- >mRNA_M-pyrifera_M_contig78658.18488.1 ID=mRNA_M-pyrifera_M_contig78658.18488.1|Name=mRNA_M-pyrifera_M_contig78658.18488.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1326bp|location=Sequence derived from alignment at M-pyrifera_M_contig78658:60..909- (Macrocystis pyrifera P11B4 male)back to top |