mRNA_M-pyrifera_M_contig78298.18407.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig78298.18407.1 vs. uniprot
Match: A0A7S0PF08_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PF08_CAFRO) HSP 1 Score: 242 bits (618), Expect = 1.060e-74 Identity = 134/209 (64.11%), Postives = 159/209 (76.08%), Query Frame = 1 Query: 1 MSGGFEDLGLLPELVRATQELGWLLPSDVQDESIPLMLGGGDVMVAAETGSGKTGAFALPTLQLVHEIRRRAEGXXXXXXXXXXXXERE-------VSAAVLNVEDRSASISVSADGLRCQSRQEHAWGGVRGSVGARRGKVYFEATIEDEGVARVGWAARSATFDLGTDAFGWGFGGTGRKSHQRRFDEYGESFGKGDVLGCLLEVGG 606 MSGGF DLGLLPELV+ATQ GWLLPSDVQDE+IPLMLGGGDVMVAA+TGSGKTGAF LP +QL +EIR+R XXXXXXXX V A L+VEDRS+ ++V GL QSR EH WGGVRG+VG RRGKVYFE T+ DEG+ARVG +A+ DLGT + G+G+GGT ++S+ RRF+ YGE+FGKGDV+G +L V G Sbjct: 21 MSGGFPDLGLLPELVKATQTAGWLLPSDVQDEAIPLMLGGGDVMVAAQTGSGKTGAFGLPAVQLAYEIRQRQLSGVGSXXXXXXXXXXXXXXXXPAVGPAALSVEDRSSWLAVDPTGLIAQSRNEHTWGGVRGTVGVRRGKVYFECTMRDEGIARVGAGTVAASLDLGTCSQGFGYGGTAKRSNSRRFEPYGETFGKGDVIGVMLNVTG 229
BLAST of mRNA_M-pyrifera_M_contig78298.18407.1 vs. uniprot
Match: A0A5A8CCU4_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CCU4_CAFRO) HSP 1 Score: 242 bits (618), Expect = 1.650e-70 Identity = 134/209 (64.11%), Postives = 159/209 (76.08%), Query Frame = 1 Query: 1 MSGGFEDLGLLPELVRATQELGWLLPSDVQDESIPLMLGGGDVMVAAETGSGKTGAFALPTLQLVHEIRRRAEGXXXXXXXXXXXXERE-------VSAAVLNVEDRSASISVSADGLRCQSRQEHAWGGVRGSVGARRGKVYFEATIEDEGVARVGWAARSATFDLGTDAFGWGFGGTGRKSHQRRFDEYGESFGKGDVLGCLLEVGG 606 MSGGF DLGLLPELV+ATQ GWLLPSDVQDE+IPLMLGGGDVMVAA+TGSGKTGAF LP +QL +EIR+R XXXXXXXX V A L+VEDRS+ ++V GL QSR EH WGGVRG+VG RRGKVYFE T+ DEG+ARVG +A+ DLGT + G+G+GGT ++S+ RRF+ YGE+FGKGDV+G +L V G Sbjct: 1 MSGGFPDLGLLPELVKATQTAGWLLPSDVQDEAIPLMLGGGDVMVAAQTGSGKTGAFGLPAVQLAYEIRQRQLSGVGSXXXXXXXXXXXXXXXXPAVGPAALSVEDRSSWLAVDPTGLIAQSRNEHTWGGVRGTVGVRRGKVYFECTMRDEGIARVGAGTVAASLDLGTCSQGFGYGGTAKRSNSRRFEPYGETFGKGDVIGVMLNVTG 209
BLAST of mRNA_M-pyrifera_M_contig78298.18407.1 vs. uniprot
Match: E1Z2R1_CHLVA (DEAD box protein 1 n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z2R1_CHLVA) HSP 1 Score: 237 bits (604), Expect = 1.890e-70 Identity = 119/205 (58.05%), Postives = 153/205 (74.63%), Query Frame = 1 Query: 13 FEDLGLLPELVRATQELGWLLPSDVQDESIPLMLGGGDVMVAAETGSGKTGAFALPTLQLVHEIRRRAE-------GXXXXXXXXXXXXEREVSAAVLNVEDRSASISVSADGLRCQSRQEHAWGGVRGSVGARRGKVYFEATIEDEGVARVGWAARSATFDLGTDAFGWGFGGTGRKSHQRRFDEYGESFGKGDVLGCLLEVGG 606 FE++G+ PEL++A +ELGW+LP+ +Q E++PL+LGGGDVM AAETGSGKTGAFALP LQ+VHE R + G XXXXX +++ A VLN EDR ++S DGLRCQ+R E AWGG RG+VGA GKVY+EAT+ DEG+ RVGW+ ++A+ DLGTD G+GFGGTG+KSH R+FD YGE +G D +GCLL+ G Sbjct: 4 FEEVGVSPELIKAVEELGWMLPTPIQAEAVPLILGGGDVMAAAETGSGKTGAFALPVLQIVHETLRTRQQNRAAGTGSNGSGQXXXXXSDQQPPACVLNSEDRDPVFAISPDGLRCQARSEQAWGGCRGTVGAFGGKVYYEATVADEGLCRVGWSTQAASLDLGTDKHGFGFGGTGKKSHNRQFDAYGEPYGLHDTIGCLLDCQG 208
BLAST of mRNA_M-pyrifera_M_contig78298.18407.1 vs. uniprot
Match: A0A2P6VLQ4_9CHLO (DEAD box protein 1 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VLQ4_9CHLO) HSP 1 Score: 237 bits (604), Expect = 1.980e-70 Identity = 111/198 (56.06%), Postives = 143/198 (72.22%), Query Frame = 1 Query: 13 FEDLGLLPELVRATQELGWLLPSDVQDESIPLMLGGGDVMVAAETGSGKTGAFALPTLQLVHEIRRRAEGXXXXXXXXXXXXEREVSAAVLNVEDRSASISVSADGLRCQSRQEHAWGGVRGSVGARRGKVYFEATIEDEGVARVGWAARSATFDLGTDAFGWGFGGTGRKSHQRRFDEYGESFGKGDVLGCLLEVGG 606 FE+ G+ PEL+ A ELGW LP+ +Q E++PL+LGGGDVM AAETGSGKTGAFALP LQ+VHE R + + S VLN EDR A ++S DGLRCQ+R E AWGG RG+VGA G+VY+EAT+ DEG+ RVGW+ ++A+ DLGTD G+G+GGTG+KSH R+F++YGE +G D +GCLL+ G Sbjct: 4 FEEAGVAPELISAVDELGWTLPTPIQAEAVPLILGGGDVMAAAETGSGKTGAFALPVLQIVHEALRTRQAARQAGGGGGTAPSAQRSLCVLNAEDRDAVFAISGDGLRCQARSEQAWGGCRGTVGAFSGRVYYEATVSDEGLCRVGWSTQAASLDLGTDKHGFGYGGTGKKSHVRQFEDYGEPYGLNDTVGCLLDSDG 201
BLAST of mRNA_M-pyrifera_M_contig78298.18407.1 vs. uniprot
Match: A0A2P6U292_CHLSO (DEAD box protein 1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U292_CHLSO) HSP 1 Score: 238 bits (607), Expect = 7.750e-70 Identity = 114/199 (57.29%), Postives = 144/199 (72.36%), Query Frame = 1 Query: 13 FEDLGLLPELVRATQELGWLLPSDVQDESIPLMLGGGDVMVAAETGSGKTGAFALPTLQLVHE-IRRRAEGXXXXXXXXXXXXEREVSAAVLNVEDRSASISVSADGLRCQSRQEHAWGGVRGSVGARRGKVYFEATIEDEGVARVGWAARSATFDLGTDAFGWGFGGTGRKSHQRRFDEYGESFGKGDVLGCLLEVGG 606 FE++G+ PEL+RA +ELGW LP+ +Q E +PL+LGGGD+M AAETGSGKTGAFALP LQ+VHE IR R A VLN EDR + +++S DGLRCQ+R E AWGGVRG+VGA G+VY+EAT+ DEG+ RVGW+ ++A+ DLGTD +GFGGTG+KSH R FD YGE +G D +GCLL+ G Sbjct: 194 FEEVGVAPELIRAVEELGWTLPTPIQAECVPLILGGGDIMAAAETGSGKTGAFALPVLQIVHEAIRTRQRSRQNAPAGGGNGGADAPPACVLNAEDRDSVVAISPDGLRCQARSEQAWGGVRGTVGAFGGRVYYEATVSDEGLCRVGWSTQAASLDLGTDRHSFGFGGTGKKSHNRSFDSYGEPYGLNDTVGCLLDCQG 392
BLAST of mRNA_M-pyrifera_M_contig78298.18407.1 vs. uniprot
Match: D8TVA6_VOLCA (DEAD box protein 1 n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TVA6_VOLCA) HSP 1 Score: 230 bits (586), Expect = 1.050e-67 Identity = 125/208 (60.10%), Postives = 156/208 (75.00%), Query Frame = 1 Query: 13 FEDLGLLPELVRATQELGWLLPSDVQDESIPLMLGGGDVMVAAETGSGKTGAFALPTLQLVHE-IRRRAEGXXXXXXXXXXXXEREVSAA------VLNVEDRSASISVSADGLRCQSRQEHAWGGVRGSVGARR---GKVYFEATIEDEGVARVGWAARSATFDLGTDAFGWGFGGTGRKSHQRRFDEYGESFGKGDVLGCLLEVGG 606 FE+LG++PELV+A +ELGW+LPS VQ E+IPL+LGGGDVM AAETGSGKTGAFA+P LQ+VHE +R+R XXXXXXXXX A VL+ EDR ++VS+DG QSR E +WGGVR ++G GKVY+E T+ DEG++RVGW+ +A DLGTD G+GFGGTG+KSHQR+FD YGE FGKGDV+GC+L+ G Sbjct: 4 FEELGVMPELVKAVEELGWMLPSPVQAEAIPLILGGGDVMAAAETGSGKTGAFAIPVLQIVHEALRQRVRSGAAXXXXXXXXXXXXXGVASPAAECVLSTEDRDLHLAVSSDGCTAQSRSEKSWGGVRATMGVFASCGGKVYYEVTVNDEGLSRVGWSCSTAALDLGTDRLGFGFGGTGKKSHQRQFDSYGEPFGKGDVIGCMLDCTG 211
BLAST of mRNA_M-pyrifera_M_contig78298.18407.1 vs. uniprot
Match: A8IRS1_CHLRE (DEAD box protein 1 n=4 Tax=Chlamydomonas TaxID=3052 RepID=A8IRS1_CHLRE) HSP 1 Score: 226 bits (575), Expect = 3.840e-66 Identity = 120/208 (57.69%), Postives = 146/208 (70.19%), Query Frame = 1 Query: 13 FEDLGLLPELVRATQELGWLLPSDVQDESIPLMLGGGDVMVAAETGSGKTGAFALPTLQLVHE-IRRRAEGXXXXXXXXXXXXEREVSA-------AVLNVEDRSASISVSADGLRCQSRQEHAWGGVRGSVGARR---GKVYFEATIEDEGVARVGWAARSATFDLGTDAFGWGFGGTGRKSHQRRFDEYGESFGKGDVLGCLLEVG 603 FE+LG++PEL +A ++LGW+LPS VQ E+IPL+LGGGDVM AAETGSGKTGAFA+P LQ+VHE +R+RA XXXX VL+ EDR ++VS DGL QSR E AWGGVRGSVG GKVY+E T+ DEG+ RVGW+ +A +LGTD GWGFGGTG+KSH R+FD YGE F DV+GCLL+ G Sbjct: 4 FEELGVMPELAKAVEDLGWMLPSPVQAEAIPLILGGGDVMAAAETGSGKTGAFAIPMLQIVHETLRQRARSGSAASTSGXXXXXXXXXXXSPAAVPCVLSSEDRELHVAVSPDGLSAQSRSEKAWGGVRGSVGVFASCGGKVYYEVTVTDEGLCRVGWSCPTAALELGTDRLGWGFGGTGKKSHNRQFDSYGEPFALNDVVGCLLDCG 211
BLAST of mRNA_M-pyrifera_M_contig78298.18407.1 vs. uniprot
Match: A0A150H4J5_GONPE (DEAD box protein 1 n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H4J5_GONPE) HSP 1 Score: 224 bits (571), Expect = 4.720e-66 Identity = 125/213 (58.69%), Postives = 158/213 (74.18%), Query Frame = 1 Query: 1 MSGGFEDLGLLPELVRATQELGWLLPSDVQDESIPLMLGGGDVMVAAETGSGKTGAFALPTLQLVHE-IRRRAEGXXXXXXXXXXXXEREVSA-------AVLNVEDRSASISVSADGLRCQSRQEHAWGGVRGSVGARRG---KVYFEATIEDEGVARVGWAARSATFDLGTDAFGWGFGGTGRKSHQRRFDEYGESFGKGDVLGCLLEVGG 606 M+G FE+LG++PEL +A ++LGW+LP+ VQ E+IPL+LGGGDVM AAETGSGKTGAFA+P LQ+VHE +R+R XXXXXXXXXX L+ EDR ++VSADG+ QSR E +WGGVR SVG G KVY+E T+ DEG++RVGW+ +A+ DLGTD +GFGGTG+KSH R+FDEYGE FG+GDV+GCLL+ G Sbjct: 1 MAGAFEELGVMPELCKAVEDLGWMLPTPVQVEAIPLILGGGDVMAAAETGSGKTGAFAIPVLQIVHEALRQRTRSGAXXXXXXXXXXXXXXXXXXXXXXECCLSSEDRELHVAVSADGMVAQSRSEKSWGGVRASVGVFAGCGGKVYYEVTVTDEGLSRVGWSTPTASLDLGTDRQSFGFGGTGKKSHARQFDEYGEPFGQGDVVGCLLDCSG 213
BLAST of mRNA_M-pyrifera_M_contig78298.18407.1 vs. uniprot
Match: A0A8J4EXT5_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4EXT5_9CHLO) HSP 1 Score: 219 bits (558), Expect = 4.640e-65 Identity = 116/204 (56.86%), Postives = 147/204 (72.06%), Query Frame = 1 Query: 13 FEDLGLLPELVRATQELGWLLPSDVQDESIPLMLGGGDVMVAAETGSGKTGAFALPTLQLVHE-IRRRAEGXXXXXXXXXXXXEREVSAA-----VLNVEDRSASISVSADGLRCQSRQEHAWGGVR--GSVGARRG-KVYFEATIEDEGVARVGWAARSATFDLGTDAFGWGFGGTGRKSHQRRFDEYGESFGKGDVLGCLLE 597 FE+LG++PEL +A +ELGW LPS VQ E+IPL+LGGGDVM AAETGSGKTGAFA+P LQ+VHE +R+R XX A VLN+EDR ++++S DG QSR E +WGGVR G V A G KVY+E T+ DEG++RVGW+ +A+ DLGTD G+GFGGTG+KSHQR+FD Y E FG+GDV+GC+L+ Sbjct: 4 FEELGVMPELCKAVEELGWTLPSPVQAEAIPLILGGGDVMAAAETGSGKTGAFAIPVLQIVHEALRQRVRSGTAASISSRGXXXXXXXANATVDWVLNIEDRDLNVALSPDGCTAQSRSEKSWGGVRATGGVFASCGDKVYYEVTVNDEGLSRVGWSCPTASRDLGTDRLGFGFGGTGKKSHQRQFDAYAEPFGQGDVIGCMLD 207
BLAST of mRNA_M-pyrifera_M_contig78298.18407.1 vs. uniprot
Match: A0A8J4B4K7_9CHLO (DEAD box protein 1 n=3 Tax=Volvox TaxID=3066 RepID=A0A8J4B4K7_9CHLO) HSP 1 Score: 219 bits (558), Expect = 1.120e-63 Identity = 116/204 (56.86%), Postives = 147/204 (72.06%), Query Frame = 1 Query: 13 FEDLGLLPELVRATQELGWLLPSDVQDESIPLMLGGGDVMVAAETGSGKTGAFALPTLQLVHE-IRRRAEGXXXXXXXXXXXXEREVSAA-----VLNVEDRSASISVSADGLRCQSRQEHAWGGVR--GSVGARRG-KVYFEATIEDEGVARVGWAARSATFDLGTDAFGWGFGGTGRKSHQRRFDEYGESFGKGDVLGCLLE 597 FE+LG++PEL +A +ELGW LPS VQ E+IPL+LGGGDVM AAETGSGKTGAFA+P LQ+VHE +R+R XX A VLN+EDR ++++S DG QSR E +WGGVR G V A G KVY+E T+ DEG++RVGW+ +A+ DLGTD G+GFGGTG+KSHQR+FD Y E FG+GDV+GC+L+ Sbjct: 4 FEELGVMPELCKAVEELGWTLPSPVQAEAIPLILGGGDVMAAAETGSGKTGAFAIPVLQIVHEALRQRVRSGTAASISSRGXXXXXXXANATVDWVLNIEDRDLNVALSPDGCTAQSRSEKSWGGVRATGGVFASCGDKVYYEVTVNDEGLSRVGWSCPTASRDLGTDRLGFGFGGTGKKSHQRQFDAYAEPFGQGDVIGCMLD 207 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78298.18407.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig78298.18407.1 >prot_M-pyrifera_M_contig78298.18407.1 ID=prot_M-pyrifera_M_contig78298.18407.1|Name=mRNA_M-pyrifera_M_contig78298.18407.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=202bp MSGGFEDLGLLPELVRATQELGWLLPSDVQDESIPLMLGGGDVMVAAETGback to top mRNA from alignment at M-pyrifera_M_contig78298:210..987+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig78298.18407.1 ID=mRNA_M-pyrifera_M_contig78298.18407.1|Name=mRNA_M-pyrifera_M_contig78298.18407.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=778bp|location=Sequence derived from alignment at M-pyrifera_M_contig78298:210..987+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig78298:210..987+ >mRNA_M-pyrifera_M_contig78298.18407.1 ID=mRNA_M-pyrifera_M_contig78298.18407.1|Name=mRNA_M-pyrifera_M_contig78298.18407.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1212bp|location=Sequence derived from alignment at M-pyrifera_M_contig78298:210..987+ (Macrocystis pyrifera P11B4 male)back to top |