mRNA_M-pyrifera_M_contig7741.18224.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7741.18224.1 vs. uniprot
Match: D7FQB5_ECTSI (SAM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB5_ECTSI) HSP 1 Score: 339 bits (869), Expect = 1.900e-114 Identity = 176/273 (64.47%), Postives = 206/273 (75.46%), Query Frame = 1 Query: 1 PSSWSASKLSSWLSQDQKIDPEAIDALALCDVNGRMFLEMDEEDLAESDELGLDMQNIHAFLRLQAQLEALELSRNGETPPAPGASVLPT----------------------------KPPPVTAASAVVGASAEGAGACRRSSTCSETWSLPCISVDADGNSYFSDKTVALGTGT-GSGIGALSELIPSAGVKFRETPGDYDFDFHTAPAKQFIVSLDAGVDIEVTDGTRRIFPAGTVMFVEDTWGKGHRSRAVNGKRRRSLFVIVPEDFSL 732 PSSWSAS+LS+WL +D+K++PEAIDALALCDV+GRMFLEMDEEDLAESDELGLDM++IHAFL+LQA LEALELS +GE PP PG+SVLP +PP + VG G G S +WSLPC+SVDA+GNS+F D+ VALG GT GSGIGALSELIP+ G+KFRETPGDYDFDFH APA+Q +VSLD GVDIEVTDGTRR+FPAGTVM EDTWGKGHRSRAV+GK R+SLF+++P+DF L Sbjct: 8 PSSWSASRLSAWLGEDEKLNPEAIDALALCDVDGRMFLEMDEEDLAESDELGLDMKSIHAFLKLQADLEALELSHHGERPPLPGSSVLPFNTANPQPRPXXXXXXXXXXXXETAGSSGEPPCTLGGESSVGGCGSGGG--------SRSWSLPCVSVDAEGNSFFCDRKVALGAGTTGSGIGALSELIPTTGLKFRETPGDYDFDFHCAPARQLVVSLDEGVDIEVTDGTRRVFPAGTVMLAEDTWGKGHRSRAVDGKSRKSLFLVLPDDFKL 272
BLAST of mRNA_M-pyrifera_M_contig7741.18224.1 vs. uniprot
Match: A0A7S4C942_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4C942_9EUGL) HSP 1 Score: 132 bits (333), Expect = 1.640e-35 Identity = 62/108 (57.41%), Postives = 80/108 (74.07%), Query Frame = 1 Query: 364 WSLPCISVDADGNSYFSDKTVALG-TGTGSGIGALSELIPSAGVKFRETPGDYDFDFHTAPAKQFIVSLDAGVDIEVTDGTRRIFPAGTVMFVEDTWGKGHRSRAVNG 684 W +P ++VD G SY+S T+ LG +G + IGALSE++ ++ RETPGDY FD+H AP KQFIV+LD VD+EV+DGTR++ AG + FVEDTWG GH SRAVNG Sbjct: 14 WVIPVVAVDEAGKSYWSSMTIPLGASGGANSIGALSEVMKVTTMQIRETPGDYKFDWHCAPRKQFIVNLDGAVDVEVSDGTRKVVSAGEMFFVEDTWGTGHLSRAVNG 121
BLAST of mRNA_M-pyrifera_M_contig7741.18224.1 vs. uniprot
Match: A0A7S1NNL2_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NNL2_9EUGL) HSP 1 Score: 124 bits (311), Expect = 2.230e-32 Identity = 57/109 (52.29%), Postives = 83/109 (76.15%), Query Frame = 1 Query: 397 GNSYFSDKTVALGTGTG-SGIGALSELIPSAGVKFRETPGDYDFDFHTAPAKQFIVSLDAGVDIEVTDGTRRIFPAGTVMFVEDTWGKGHRSRAVNGKRRRSLFVIVPE 720 G+SYF+ K++ LG G + IG+LS +P G+ R+TP DYDFD+H AP KQF+V+LDA V+IEV+DG++++ AG + +EDT G+GHRS++VNG+ RRSLF+ V + Sbjct: 1 GHSYFTTKSIPLGPSHGPNSIGSLSAAMPVTGLVVRDTPADYDFDWHVAPRKQFVVNLDAAVEIEVSDGSKKVLGAGEMFLLEDTEGQGHRSKSVNGQPRRSLFITVAD 109
BLAST of mRNA_M-pyrifera_M_contig7741.18224.1 vs. uniprot
Match: A0A7S4P8W1_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4P8W1_9EUKA) HSP 1 Score: 120 bits (302), Expect = 1.160e-30 Identity = 60/123 (48.78%), Postives = 83/123 (67.48%), Query Frame = 1 Query: 358 ETWSLPCISVDADGNSYFSDKTVALGTGTGSGIGALSELIPSA-GVKFRETPGDYDFDFHTAPAKQFIVSLDAGVDIEVTDGTRRIFPAGTVMFVEDTWGKGHRSRAVNGKRRRSLFVIVPED 723 +T + I++ +G S F + L + G+ IG LS L+P+ G+ FRETPGDY+F +H AP KQFI++LDA V +EVTDGT+++ AG V FVED G GH S +V GK RRS+F+ V +D Sbjct: 6 KTMKITTITMTKEGGSQFGTMIIPLSSPEGA-IGTLSPLLPTKNGIFFRETPGDYNFSWHCAPRKQFIINLDAAVQVEVTDGTKKVLEAGEVFFVEDIEGTGHYSSSVGGKTRRSVFIPVDDD 127
BLAST of mRNA_M-pyrifera_M_contig7741.18224.1 vs. uniprot
Match: A0A835Z6U7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6U7_9STRA) HSP 1 Score: 123 bits (308), Expect = 2.230e-30 Identity = 55/73 (75.34%), Postives = 61/73 (83.56%), Query Frame = 1 Query: 505 TPGDYDFDFHTAPAKQFIVSLDAGVDIEVTDGTRRIFPAGTVMFVEDTWGKGHRSRAVNGKRRRSLFVIVPED 723 TPGDYDFDFH AP +QFIVSLDAGVDIE + G RR FPAGTVMFVEDTWG+GHRSRAV G R +F+ VP+D Sbjct: 162 TPGDYDFDFHVAPRRQFIVSLDAGVDIETSSGERRAFPAGTVMFVEDTWGRGHRSRAVGGAARHCVFIGVPDD 234
BLAST of mRNA_M-pyrifera_M_contig7741.18224.1 vs. uniprot
Match: UPI00096B5534 (uncharacterized protein LOC109581817 n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=UPI00096B5534) HSP 1 Score: 119 bits (299), Expect = 3.330e-30 Identity = 58/113 (51.33%), Postives = 80/113 (70.80%), Query Frame = 1 Query: 394 DGNSYFSDKTVALGTGTGSGIGALSELIPSAGVKFRETPGDYDFDFHTAPAKQFIVSLDAGVDIEVTDGTRRIFPAGTVMFVEDTWGKGHRSRAVNGKRRRSLFVIVPEDFSL 732 DG S+F + + G G IG++S++IPS G+ FRETP Y++ +HTAP +QFIV+LDA V + V+ G +RI G V FVEDT GKGH S +V+GK RRS+F+ VP+D+ L Sbjct: 25 DGESHFGTVKIKM-KGKGD-IGSISDIIPSTGLMFRETPSSYNYSWHTAPRRQFIVNLDASVQVTVSSGEKRILKEGEVFFVEDTTGKGHFSESVDGKVRRSVFLPVPDDYKL 135
BLAST of mRNA_M-pyrifera_M_contig7741.18224.1 vs. uniprot
Match: A0A7C8CI49_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7C8CI49_9DELT) HSP 1 Score: 116 bits (290), Expect = 3.710e-29 Identity = 58/112 (51.79%), Postives = 79/112 (70.54%), Query Frame = 1 Query: 379 ISVDADGNSYFSDKTVALGTGTGSGIGALSELIPSAGVKFRETPGDYDFDFHTAPAKQFIVSLDAGVDIEVTDGTRRIFPAGTVMFVEDTWGKGHRSRAVNGKRRRSLFVIV 714 I D S+F D + L G G+ IG++S L + G+ FRET GDYDF FH AP +Q++++L+AGV+IEV DGTRR+ AG V+ EDT G+GH SRAV+G+ RRS+FV + Sbjct: 6 IYTGEDNESHFEDLEIPL-KGFGA-IGSISSLEGATGIAFRETEGDYDFGFHNAPRRQYVINLNAGVEIEVGDGTRRLLGAGEVLLAEDTTGRGHISRAVDGRPRRSIFVTL 115
BLAST of mRNA_M-pyrifera_M_contig7741.18224.1 vs. uniprot
Match: A0A2V7EX67_9BACT (Uncharacterized protein n=5 Tax=unclassified Candidatus Rokubacteria TaxID=2760815 RepID=A0A2V7EX67_9BACT) HSP 1 Score: 114 bits (284), Expect = 2.900e-28 Identity = 57/110 (51.82%), Postives = 73/110 (66.36%), Query Frame = 1 Query: 385 VDADGNSYFSDKTVALGTGTGSGIGALSELIPSAGVKFRETPGDYDFDFHTAPAKQFIVSLDAGVDIEVTDGTRRIFPAGTVMFVEDTWGKGHRSRAVNGKRRRSLFVIV 714 VD +G S+F D V L T +G LS +P+ G+ FRE DYD D+H AP +Q+IV+LDAGV I +DG R AG V+ VEDTWGKGHRS+A++GK R +FV V Sbjct: 8 VDKNGESHFEDMEVPLTESTRAG--RLSARLPATGIIFREVSADYDLDWHPAPRRQYIVNLDAGVQITASDGETRRIGAGEVLLVEDTWGKGHRSKALDGKPRHCIFVPV 115
BLAST of mRNA_M-pyrifera_M_contig7741.18224.1 vs. uniprot
Match: A0A3M1PS35_9BACT (Uncharacterized protein n=1 Tax=Calditrichaeota bacterium TaxID=2212469 RepID=A0A3M1PS35_9BACT) HSP 1 Score: 114 bits (284), Expect = 2.980e-28 Identity = 53/112 (47.32%), Postives = 76/112 (67.86%), Query Frame = 1 Query: 379 ISVDADGNSYFSDKTVALGTGTGSGIGALSELIPSAGVKFRETPGDYDFDFHTAPAKQFIVSLDAGVDIEVTDGTRRIFPAGTVMFVEDTWGKGHRSRAVNGKRRRSLFVIV 714 I DA G+S+F D + L IG LSE +P+AG+ FRE DYD+D+H AP +Q+I+ LD ++I+V+DG +R F G V+ VEDT G+GH++R NG+ RRS+FV + Sbjct: 6 IFADASGDSHFEDVEIPLRDA--GAIGRLSECLPAAGIIFRENDPDYDYDWHNAPTRQYIILLDGEIEIQVSDGEKRTFCGGDVLLVEDTHGRGHKTRVTNGQPRRSIFVTL 115
BLAST of mRNA_M-pyrifera_M_contig7741.18224.1 vs. uniprot
Match: A0A814EIU2_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814EIU2_9BILA) HSP 1 Score: 114 bits (285), Expect = 3.790e-28 Identity = 56/112 (50.00%), Postives = 75/112 (66.96%), Query Frame = 1 Query: 388 DADGNSYFSDKTVALGTGTGSGIGALSELIPSAGVKFRETPGDYDFDFHTAPAKQFIVSLDAGVDIEVTDGTRRIFPAGTVMFVEDTWGKGHRSRAVNGKRRRSLFVIVPED 723 D G S+F + T L IG +SE I S + FR TPGDY+FD H AP +QFI++LDA V + V+DG RI P G+++FVEDT GKGH S+AV+ K R S+F+ VP++ Sbjct: 12 DDKGESHFDEVTAPLNDQ--GVIGFISEAIGSTNIFFRYTPGDYNFDLHNAPRRQFIINLDASVKVTVSDGESRILPPGSILFVEDTNGKGHISQAVDSKPRNSIFIAVPDN 121 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7741.18224.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7741.18224.1 >prot_M-pyrifera_M_contig7741.18224.1 ID=prot_M-pyrifera_M_contig7741.18224.1|Name=mRNA_M-pyrifera_M_contig7741.18224.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=210bp MFLEMDEEDLAESDELGLDMQNIHAFLRLQAQLEALELSRNGETPPAPGAback to top mRNA from alignment at M-pyrifera_M_contig7741:4527..8581- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7741.18224.1 ID=mRNA_M-pyrifera_M_contig7741.18224.1|Name=mRNA_M-pyrifera_M_contig7741.18224.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4055bp|location=Sequence derived from alignment at M-pyrifera_M_contig7741:4527..8581- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7741:4527..8581- >mRNA_M-pyrifera_M_contig7741.18224.1 ID=mRNA_M-pyrifera_M_contig7741.18224.1|Name=mRNA_M-pyrifera_M_contig7741.18224.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1260bp|location=Sequence derived from alignment at M-pyrifera_M_contig7741:4527..8581- (Macrocystis pyrifera P11B4 male)back to top |