mRNA_M-pyrifera_M_contig77277.18204.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig77277.18204.1
Unique NamemRNA_M-pyrifera_M_contig77277.18204.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig77277.18204.1 vs. uniprot
Match: A0A7S4ISD1_9EUKA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4ISD1_9EUKA)

HSP 1 Score: 226 bits (577), Expect = 1.710e-71
Identity = 114/227 (50.22%), Postives = 149/227 (65.64%), Query Frame = 1
Query:    1 DAAIKWKALDSNPEVLTTFSRKLGLPEVRPDCMENWAIGDIFGLDEDLLGFVPQPCLAVLLLIPCTTKTPDTGNAEHGQKLFYMKQPDALGNACGTIALFHAFANHMAELGMSD-GPLAAWIDRVKDMTPEQRGDALNSQEDLNDLHNSSAVQGATEVKVEGVEHHFICFTSIEGHLFELDGRKSGPVCHGEIKEASMLHAAARVIKEAYIAPNPDLCEFAMMSLAP 678
            +A  KWKAL+SNPEVLT+  RKLGL          WA  DIFG D DLL  VP PC+AV+LL P   KTP+  +     +LFY+ Q   LGNACGTIA+ H+FAN++  L   D   L  ++ ++K  TP +RG+ LN   ++N LHN  A +G TEV+   V +HF+CFT++ G LFELDG K+GP+ HGEI EA +L +AA  I+E Y+ PNPD  EFAM+ L+P
Sbjct:    9 NARRKWKALESNPEVLTSLGRKLGLKG-------GWAFADIFGFDADLLAMVPSPCVAVILLFPSNKKTPNPTSEVKNDELFYLTQIPELGNACGTIAMLHSFANNIKTLEFDDESVLVNFVKKLKKETPLKRGELLNDDAEINALHNELAHEGQTEVQEGKVNNHFVCFTNVGGRLFELDGTKTGPIDHGEIGEAGLLQSAATTIQEHYVKPNPDCLEFAMIGLSP 228          
BLAST of mRNA_M-pyrifera_M_contig77277.18204.1 vs. uniprot
Match: UPI00188558E0 (ubiquitin carboxyl-terminal hydrolase isozyme L3-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI00188558E0)

HSP 1 Score: 170 bits (430), Expect = 3.290e-49
Identity = 94/237 (39.66%), Postives = 137/237 (57.81%), Query Frame = 1
Query:   10 IKWKALDSNPEVLTTFSRKLGLPEVRPDCMENWAIGDIFGLDEDLLGFVPQPCLAVLLLIPCTTKTPDTGNAE------HGQ----KLFYMKQPDALGNACGTIALFHAFANHMAELGMSDGPLAAWIDRVKDMTPEQRGDALNSQEDLNDLHNSSAVQGATEV--KVEGVEHHFICFTSIEGHLFELDGRKSGPVCHGEIKEASMLHAAARVIKEAYIAPNPDLCEFAMMSLAPAQ 684
            ++W  L+SNP+V+ +F   LGLP         WA+ D++GLD ++L  VPQP  AVLLL P T K       E       GQ    K+++M+Q   +GNACGT+AL HA AN+   L +  GPLA +  R    TPE+R  AL   + L   H ++  QG TE   + + ++ HFI F  ++GHL+ELDGR+  PV HG   + S+L  AA+V+K  ++  +P    F++++LA AQ
Sbjct:   11 VRWLPLESNPDVMNSFLHNLGLPS-------KWAVTDVYGLDPEMLAMVPQPVSAVLLLYPLTEKAVTASADEDAKIQAEGQVQSPKVYFMRQ--TIGNACGTVALMHALANNKEMLQLESGPLAEFFSRTAQQTPEERAAALQLFQQLEAAHEAAGHQGQTEAPSRHDRLDTHFIAFVHVDGHLYELDGRRPAPVNHGPTSQGSLLPDAAKVVKS-FMERDPTEVNFSVLALASAQ 237          
BLAST of mRNA_M-pyrifera_M_contig77277.18204.1 vs. uniprot
Match: A0A1L8ED88_HAEIR (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Haematobia irritans TaxID=7368 RepID=A0A1L8ED88_HAEIR)

HSP 1 Score: 169 bits (428), Expect = 4.900e-49
Identity = 93/231 (40.26%), Postives = 141/231 (61.04%), Query Frame = 1
Query:   16 WKALDSNPEVLTTFSRKLGLPEVRPDCMENWAIGDIFGLDEDLLGFVPQPCLAVLLLIPCTTKTPD---------TGNAE-HGQKLFYMKQPDALGNACGTIALFHAFANHMAELGMSDGPLAAWIDRVKDMTPEQRGDALNSQEDLNDLHNSSAVQGATEVKVEG-VEHHFICFTSIEGHLFELDGRKSGPVCHGEIKEASMLHAAARVIKEAYIAPNPDLCEFAMMSLA 675
            W  L+SNP+VLT +   LG+ +        W++ D+ GL+ ++L ++P+P  +++LL PC+ K            +G A+ H + LFYM+Q     NACGT+AL H+ AN+ A++ + DGPL  ++D  KD+TPE+RG AL S + + D H + A +G T    E  V HHFI   ++EG L+ELDGRKS PV HG   + + +  AARV KE ++A +P+   F +M+LA
Sbjct:    4 WTPLESNPDVLTKYIHTLGVSK-------EWSLTDVMGLEPEMLEWIPKPAKSIILLFPCSEKYEKHRAEENERLSGEAQNHPKSLFYMRQ--FTSNACGTVALIHSVANN-ADIVLEDGPLKKFLDTAKDLTPEERGKALESDKGVTDSHQTLAQEGQTAANPEEKVNHHFIALVNVEGTLYELDGRKSFPVKHGATTDENFVQDAARVCKE-FMARDPEELRFTVMALA 223          
BLAST of mRNA_M-pyrifera_M_contig77277.18204.1 vs. uniprot
Match: UPI001CA820E8 (ubiquitin carboxyl-terminal hydrolase-like n=1 Tax=Leptopilina heterotoma TaxID=63436 RepID=UPI001CA820E8)

HSP 1 Score: 169 bits (428), Expect = 5.350e-49
Identity = 93/232 (40.09%), Postives = 134/232 (57.76%), Query Frame = 1
Query:   16 WKALDSNPEVLTTFSRKLGLPEVRPDCMENWAIGDIFGLDEDLLGFVPQPCLAVLLLIPCTTKTPDTGNAEHGQK---------LFYMKQPDALGNACGTIALFHAFANHMAELGMSDGPLAAWIDRVKDMTPEQRGDALNSQEDLNDLHNSSAVQGATEVKVEG--VEHHFICFTSIEGHLFELDGRKSGPVCHGEIKEASMLHAAARVIKEAYIAPNPDLCEFAMMSLAP 678
            W  L+SNPEV+T    KLG+P         W I D++GL+ DLL  + +P LA++LL P + +  D G  E  +          ++++KQ   + NACGTIAL H+ AN+  +L + DG L ++I+  KD++P +RGD L    D+ D H   A +G TE   E   V HHF+ F   +GH++ELDGR+ GP+ HG    ++ L  AARV KE Y+  NPD   F M++L P
Sbjct:    8 WVPLESNPEVMTKLCHKLGVPT-------KWNIVDVYGLEPDLLAILTKPVLAMILLYPLSDQEKDRGLKEDSETRESSTVSPDVYFLKQ--FISNACGTIALIHSLANNAEKLELEDGFLKSFIEETKDLSPFERGDRLMQAGDIADTHKELAQEGQTEAPNENARVYHHFVAFIEKDGHIYELDGRRDGPINHGVSSPSTFLEDAARVCKE-YMQRNPDEMGFTMVALTP 229          
BLAST of mRNA_M-pyrifera_M_contig77277.18204.1 vs. uniprot
Match: A0A6J0BIZ4_NEOLC (Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Diprioninae TaxID=410274 RepID=A0A6J0BIZ4_NEOLC)

HSP 1 Score: 169 bits (427), Expect = 6.930e-49
Identity = 97/232 (41.81%), Postives = 136/232 (58.62%), Query Frame = 1
Query:   16 WKALDSNPEVLTTFSRKLGLPEVRPDCMENWAIGDIFGLDEDLLGFVPQPCLAVLLLIPCTTKTPDTGN------AEHGQKL----FYMKQPDALGNACGTIALFHAFANHMAELGMSDGPLAAWIDRVKDMTPEQRGDALNSQEDLNDLHNSSAVQGATEVKVEG--VEHHFICFTSIEGHLFELDGRKSGPVCHGEIKEASMLHAAARVIKEAYIAPNPDLCEFAMMSLA 675
            W  L+SNPEV+T F  KLG+P+       NW I D++G+D DLL  +P+P LA++LL P T K+    N       E GQK+    +YMKQ   + NACGT+AL H  AN+  ++ + DG L +++D  K ++P +RG+ L   E + D H   A +G TE   +   V HHFI F   +G L+ELDGR+S PV HG     + L  A RV +E Y+A +PD   F M++LA
Sbjct:    3 WVPLESNPEVMTKFLHKLGVPK-------NWGIVDVYGVDPDLLAVIPRPVLALILLYPITDKSDRFKNDREAKLKEDGQKISEDIYYMKQ--CVSNACGTVALIHGVANNSDKIQLEDGQLKSFLDSTKGLSPLERGELLAKSEAIIDTHKELAQEGQTEAPGDDSPVNHHFITFVEKDGSLYELDGRQSIPVNHGASTADTFLDDAVRVCRE-YMARDPDEVRFTMVALA 224          
BLAST of mRNA_M-pyrifera_M_contig77277.18204.1 vs. uniprot
Match: UPI001CAA36FA (ubiquitin carboxyl-terminal hydrolase-like n=1 Tax=Leptopilina heterotoma TaxID=63436 RepID=UPI001CAA36FA)

HSP 1 Score: 168 bits (425), Expect = 1.390e-48
Identity = 93/233 (39.91%), Postives = 139/233 (59.66%), Query Frame = 1
Query:   10 IKWKALDSNPEVLTTFSRKLGLPEVRPDCMENWAIGDIFGLDEDLLGFVPQPCLAVLLLIPCT-------TKTPD--TGNAEHGQKLFYMKQPDALGNACGTIALFHAFANHMAELGMSDGPLAAWIDRVKDMTPEQRGDALNSQEDLNDLHNSSAVQGATEVKVEGVEHHFICFTSIEGHLFELDGRKSGPVCHGEIKEASMLHAAARVIKEAYIAPNPDLCEFAMMSLAPA 681
            + W  L+SNPEV+T    KLG+P         W I D++GL+ DLL  + +P LA++LL P +       TK  +   G+A     ++Y+KQ   + NACGTIAL H+ AN++ +L + DG L ++++  K+++P +RG+ L S  D+ D H   A +G TEV  E   HHF+ F   +GH++ELDGR+ GP+ HG    ++ L  AARV KE Y+  NPD   F+++ L PA
Sbjct:    6 MSWVPLESNPEVMTKLFHKLGVPT-------KWNIVDVYGLEPDLLAILTKPVLAMILLYPLSDTEKNRVTKEDNETNGSATISPNVYYLKQ--FISNACGTIALIHSLANNVDKLDLQDGMLKSFLEETKNLSPTERGERLMSAGDIADTHKEFAREGQTEVPDESY-HHFVTFVEKDGHIYELDGRRDGPINHGVSSPSTFLEDAARVCKE-YMKRNPDEMGFSVLVLTPA 227          
BLAST of mRNA_M-pyrifera_M_contig77277.18204.1 vs. uniprot
Match: A0A0L0D141_THETB (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D141_THETB)

HSP 1 Score: 167 bits (422), Expect = 6.080e-48
Identity = 101/239 (42.26%), Postives = 134/239 (56.07%), Query Frame = 1
Query:    1 DAAIKWKALDSNPEVLTTFSRKLGLPEVRPDCMENWAIGDIFGLDEDLLGFVPQPCLAVLLLIPCTTKTPDTGNAEH--------GQKLFYMKQPDALGNACGTIALFHAFANHMAELGMSDGP-LAAWIDRVKDMTPEQRGDALNSQEDLNDLHNSSAVQG--ATEVKVEGVEHHFICFTSIEGHLFELDGRKSGPVCHGEIKEASMLHAAARVIKEAYIAPNPDLCEFAMM--SLAP 678
            DA  +WKA++SNPEV T F+  LG+PE +  CM      DI+GLD+D+L F+PQP +AVLL  P      D  + E             FYM Q D LGNACGTIA+ HA AN ++ L ++D   L  ++D V + TP  RG+   + E +  LHN +A QG  A       +  HFICF   +G L+ELDGRK GP+         +  AAA  IK  ++APNPD   F+M+  SL P
Sbjct:    8 DARDRWKAVESNPEVFTNFAANLGVPEGK--CM----FSDIWGLDDDMLAFLPQPVMAVLLCRPSGLNKVDRPDPESVYGDDGAPADPPFYMTQIDELGNACGTIAMVHALANTVSALDLADDSILRGFLDSVAEATPLVRGETFAANERIRSLHNGTASQGQSAQPESEASIAAHFICFAFHDGILYELDGRKPGPIPLARCSADGVAAAAAAAIKTYFMAPNPDEYNFSMVAYSLVP 240          
BLAST of mRNA_M-pyrifera_M_contig77277.18204.1 vs. uniprot
Match: A0A507EAE3_9FUNG (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507EAE3_9FUNG)

HSP 1 Score: 165 bits (418), Expect = 1.820e-47
Identity = 87/235 (37.02%), Postives = 144/235 (61.28%), Query Frame = 1
Query:   16 WKALDSNPEVLTTFSRKLGLPEVRPDCMENWAIGDIFGLDEDLLGFVPQPCLAVLLLIPCTTKTPDTGNAEHGQ----------KLFYMKQPDALGNACGTIALFHAFANHMAELGMSDGPLAAWIDRVKDMTPEQRGDALNSQEDLNDLHNSSAVQGATEV--KVEGVEHHFICFTSIEGHLFELDGRKSGPVCHGEIKEASMLHAAARVIKEAYIAPNPDLCEFAMMSLAPAQ 684
            W  L++NPEV+  ++++LG+         +W+  D++GL++DLL F+P+P  AV+LL P T K  +   AE  +          KL++++Q   + NACGTI L HA AN+  EL + DGPL + +D+  +++PE+R +AL + + L  +H  S+ +G T    +   V+ HF+CF   EGH++E+DGRK  P+ HG  + + +L  + RVIKE ++A +P+   F +++LAP Q
Sbjct:    9 WIPLEANPEVMNKYTQRLGVAS-------SWSFTDVWGLEDDLLAFIPRPVKAVVLLFPVTAKYEEFRRAEEAEIIEDGQVVSPKLYFVQQ--TIPNACGTIGLLHALANNAEELKLEDGPLKSILDQTANISPEERAEALETSKALAQVHEESSQEGQTAAPPRDSDVDLHFVCFVQKEGHVYEMDGRKPFPINHG--RSSDLLMDSVRVIKE-FMARDPENLNFTVIALAPTQ 231          
BLAST of mRNA_M-pyrifera_M_contig77277.18204.1 vs. uniprot
Match: A0A6P3XEG8_DINQU (Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Ponerini TaxID=141711 RepID=A0A6P3XEG8_DINQU)

HSP 1 Score: 164 bits (415), Expect = 4.190e-47
Identity = 93/233 (39.91%), Postives = 136/233 (58.37%), Query Frame = 1
Query:   16 WKALDSNPEVLTTFSRKLGLPEVRPDCMENWAIGDIFGLDEDLLGFVPQPCLAVLLLIPCTTKTPDTGNAEHGQK--------LFYMKQPDALGNACGTIALFHAFANHMAELGMSDGPLAAWIDRVKDMTPEQRGDALNSQEDLNDLHNSSAVQGATEVKVEGVE--HHFICFTSIEGHLFELDGRKSGPVCHGEIKEASMLHAAARVIKEAYIAPNPDLCEFAMMSLAPAQ 684
            W  L+SNPEV+T F  KLG+P+        W+I D++GLD +LL  +P+P L+V+LL P T K   T   E   K        +++MKQ   + NACGTIAL H+ AN++  L + DG L  ++D  K +   +RG+ L + + + D H  SA +G TE   E +E  HHFI F   +G L+ELDGRK  P+ HG     ++L  AARV K+ Y+A +P+   F +++LA  +
Sbjct:    3 WVPLESNPEVMTKFLHKLGVPK-------KWSIIDVYGLDPELLAIIPKPVLSVILLYPVTIKNEKTEEEEESAKDKSDTPDIVYHMKQ--YVSNACGTIALVHSVANNLDVLQLEDGFLKTFLDETKGLPSSERGERLINAQGIIDTHMESAQEGQTEAPGEDMEVYHHFIAFVHKDGSLYELDGRKPIPINHGSTSLETLLEDAARVCKD-YMARDPEEVRFTVVALAATE 225          
BLAST of mRNA_M-pyrifera_M_contig77277.18204.1 vs. uniprot
Match: A0A158NQ48_ATTCE (Ubiquitin carboxyl-terminal hydrolase n=17 Tax=Attini TaxID=143999 RepID=A0A158NQ48_ATTCE)

HSP 1 Score: 164 bits (414), Expect = 6.100e-47
Identity = 88/231 (38.10%), Postives = 138/231 (59.74%), Query Frame = 1
Query:   16 WKALDSNPEVLTTFSRKLGLPEVRPDCMENWAIGDIFGLDEDLLGFVPQPCLAVLLLIPCTTKTPDT---------GNAEHGQKLFYMKQPDALGNACGTIALFHAFANHMAELGMSDGPLAAWIDRVKDMTPEQRGDALNSQEDLNDLHNSSAVQGATEVKVEGVE--HHFICFTSIEGHLFELDGRKSGPVCHGEIKEASMLHAAARVIKEAYIAPNPDLCEFAMMSLA 675
            W  L+SNPEV+T F  KLG+P+        W+I D++GL+ +LL  +P+P LAV+LL P ++K   T           ++  + ++++KQ  ++ NACGTIAL H+ AN++  + + DG    +++  K ++  +RG+ L   +D+ D H  SA +G TE   E VE  HHF+ F   +G L+ELDGRKS P+ HG     ++L  AARV KE Y+  +P+   F +++LA
Sbjct:    3 WVPLESNPEVMTKFLHKLGVPK-------KWSILDVYGLESELLAIIPRPILAVILLYPISSKIEKTKEEQAEAKDNKSDAAESVYHIKQ--SISNACGTIALLHSVANNLDVIQLEDGFFKKFLEETKGLSYIERGERLEKAQDIIDTHMESAQEGQTEAPAEDVEVYHHFVAFVHKDGSLYELDGRKSAPINHGSTTPETLLDDAARVCKE-YMEHDPNEVRFTVVALA 223          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77277.18204.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4ISD1_9EUKA1.710e-7150.22Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Vann... [more]
UPI00188558E03.290e-4939.66ubiquitin carboxyl-terminal hydrolase isozyme L3-l... [more]
A0A1L8ED88_HAEIR4.900e-4940.26Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Haem... [more]
UPI001CA820E85.350e-4940.09ubiquitin carboxyl-terminal hydrolase-like n=1 Tax... [more]
A0A6J0BIZ4_NEOLC6.930e-4941.81Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Dipr... [more]
UPI001CAA36FA1.390e-4839.91ubiquitin carboxyl-terminal hydrolase-like n=1 Tax... [more]
A0A0L0D141_THETB6.080e-4842.26Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Thec... [more]
A0A507EAE3_9FUNG1.820e-4737.02Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Powe... [more]
A0A6P3XEG8_DINQU4.190e-4739.91Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Pone... [more]
A0A158NQ48_ATTCE6.100e-4738.10Ubiquitin carboxyl-terminal hydrolase n=17 Tax=Att... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77277contigM-pyrifera_M_contig77277:127..1011 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score171.4
Seed ortholog evalue4.9e-40
Seed eggNOG ortholog529818.AMSG_00082T0
Preferred nameUCHL3
KEGG rclassRC00002
KEGG koko:K05609,ko:K12584
KEGG ReactionR04368
KEGG Pathwayko03018,map03018
Hectar predicted targeting categoryother localisation
GOsGO:0000338,GO:0003674,GO:0003824,GO:0004843,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009987,GO:0010992,GO:0016579,GO:0016787,GO:0019538,GO:0019725,GO:0019783,GO:0019784,GO:0036211,GO:0036459,GO:0042592,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0065007,GO:0065008,GO:0070011,GO:0070646,GO:0070647,GO:0071704,GO:0101005,GO:0140096,GO:1901564
EggNOG free text desc.thiol-dependent ubiquitin-specific protease activity
EggNOG OGsKOG1415@1,KOG1415@2759
EC3.4.19.12,3.6.1.59
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko03019,ko04121
Exons3
Model size687
Cds size687
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77277.18204.1prot_M-pyrifera_M_contig77277.18204.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig77277 127..1011 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816673.67722-CDS-M-pyrifera_M_contig77277:126..4821622816673.67722-CDS-M-pyrifera_M_contig77277:126..482Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77277 127..482 -
1692278111.7405841-CDS-M-pyrifera_M_contig77277:126..4821692278111.7405841-CDS-M-pyrifera_M_contig77277:126..482Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77277 127..482 -
1622816673.690965-CDS-M-pyrifera_M_contig77277:629..8721622816673.690965-CDS-M-pyrifera_M_contig77277:629..872Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77277 630..872 -
1692278111.757448-CDS-M-pyrifera_M_contig77277:629..8721692278111.757448-CDS-M-pyrifera_M_contig77277:629..872Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77277 630..872 -
1622816673.7038827-CDS-M-pyrifera_M_contig77277:923..10111622816673.7038827-CDS-M-pyrifera_M_contig77277:923..1011Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77277 924..1011 -
1692278111.766548-CDS-M-pyrifera_M_contig77277:923..10111692278111.766548-CDS-M-pyrifera_M_contig77277:923..1011Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77277 924..1011 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig77277.18204.1

>prot_M-pyrifera_M_contig77277.18204.1 ID=prot_M-pyrifera_M_contig77277.18204.1|Name=mRNA_M-pyrifera_M_contig77277.18204.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=229bp
DAAIKWKALDSNPEVLTTFSRKLGLPEVRPDCMENWAIGDIFGLDEDLLG
FVPQPCLAVLLLIPCTTKTPDTGNAEHGQKLFYMKQPDALGNACGTIALF
HAFANHMAELGMSDGPLAAWIDRVKDMTPEQRGDALNSQEDLNDLHNSSA
VQGATEVKVEGVEHHFICFTSIEGHLFELDGRKSGPVCHGEIKEASMLHA
AARVIKEAYIAPNPDLCEFAMMSLAPAQ*
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mRNA from alignment at M-pyrifera_M_contig77277:127..1011-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig77277.18204.1 ID=mRNA_M-pyrifera_M_contig77277.18204.1|Name=mRNA_M-pyrifera_M_contig77277.18204.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=885bp|location=Sequence derived from alignment at M-pyrifera_M_contig77277:127..1011- (Macrocystis pyrifera P11B4 male)
GATGCAGCTATCAAGTGGAAGGCGCTGGATAGCAACCCAGAGGTGCTGAC TACGTTCTCTCGCAAGCTGGGCCTTCCAGAGGTGCGGCGTCGCTGCCTCC TCCCTCCCAGCGACCGCTGTGCGCTCGTTTAGACAAGAGCTGACTGTATG GAGAACTGGGCGATTGGTGACATCTTTGGCCTGGACGAGGACCTCCTGGG CTTCGTGCCCCAGCCGTGTCTTGCCGTTCTGCTCCTCATTCCGTGCACAA CAAAGACGCCTGACACTGGCAACGCTGAGCACGGCCAGAAGCTCTTCTAC ATGAAGCAACCTGATGCGTTGGGCAACGCTTGTGGCACCATTGCCCTTTT CCATGCATTCGCCAACCACATGGCCGAGCTCGGTCCGTTCCTCTCCTTCA CAGCTCCTTCGGCTACAAGGGCCCACATTAGCTCCTGTGCCAGCGGTAGA TTTGCGCTTGGCAAGGATGTGCCTGTGCACCGCGTGTGTTGCTGCTGGCA GTGTGTTGCTGCTACTGACCGACTGGCAGGCATGAGCGACGGTCCTCTGG CAGCTTGGATAGATAGGGTGAAGGACATGACTCCCGAGCAACGTGGCGAC GCGCTCAACTCTCAGGAGGACCTCAACGATCTCCACAACAGCAGTGCAGT TCAGGGGGCAACTGAGGTGAAGGTGGAGGGGGTCGAGCACCACTTCATTT GCTTCACATCCATCGAGGGCCACCTCTTCGAGCTGGACGGGAGGAAGTCG GGTCCTGTGTGTCATGGTGAGATCAAGGAGGCGAGCATGCTGCACGCCGC CGCCCGGGTCATCAAGGAGGCCTACATTGCGCCCAACCCCGACCTCTGCG AGTTCGCAATGATGAGCCTTGCCCCCGCCCAGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig77277:127..1011-

>mRNA_M-pyrifera_M_contig77277.18204.1 ID=mRNA_M-pyrifera_M_contig77277.18204.1|Name=mRNA_M-pyrifera_M_contig77277.18204.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1374bp|location=Sequence derived from alignment at M-pyrifera_M_contig77277:127..1011- (Macrocystis pyrifera P11B4 male)
GATGCAGCTATCAAGTGGAAGGCGCTGGATAGCAACCCAGAGGTGCTGAC
TACGTTCTCTCGCAAGCTGGGCCTTCCAGAGGTGCGGCGATGCAGCTATC
AAGTGGAAGGCGCTGGATAGCAACCCAGAGGTGCTGACTACGTTCTCTCG
CAAGCTGGGCCTTCCAGAGGTGCGGCCTGACTGTATGGAGAACTGGGCGA
TTGGTGACATCTTTGGCCTGGACGAGGACCTCCTGGGCTTCGTGCCCCAG
CCGTGTCTTGCCGTTCTGCTCCTCATTCCGTGCACAACAAAGACGCCTGA
CACTGGCAACGCTGAGCACGGCCAGAAGCTCTTCTACATGAAGCAACCTG
ATGCGTTGGGCAACGCTTGTGGCACCATTGCCCTTTTCCATGCATTCGCC
AACCACATGGCCGAGCTCGCTGACTGTATGGAGAACTGGGCGATTGGTGA
CATCTTTGGCCTGGACGAGGACCTCCTGGGCTTCGTGCCCCAGCCGTGTC
TTGCCGTTCTGCTCCTCATTCCGTGCACAACAAAGACGCCTGACACTGGC
AACGCTGAGCACGGCCAGAAGCTCTTCTACATGAAGCAACCTGATGCGTT
GGGCAACGCTTGTGGCACCATTGCCCTTTTCCATGCATTCGCCAACCACA
TGGCCGAGCTCGGCATGAGCGACGGTCCTCTGGCAGCTTGGATAGATAGG
GTGAAGGACATGACTCCCGAGCAACGTGGCGACGCGCTCAACTCTCAGGA
GGACCTCAACGATCTCCACAACAGCAGTGCAGTTCAGGGGGCAACTGAGG
TGAAGGTGGAGGGGGTCGAGCACCACTTCATTTGCTTCACATCCATCGAG
GGCCACCTCTTCGAGCTGGACGGGAGGAAGTCGGGTCCTGTGTGTCATGG
TGAGATCAAGGAGGCGAGCATGCTGCACGCCGCCGCCCGGGTCATCAAGG
AGGCCTACATTGCGCCCAACCCCGACCTCTGCGAGTTCGCAATGATGAGC
CTTGCCCCCGCCCAGTGAGCATGAGCGACGGTCCTCTGGCAGCTTGGATA
GATAGGGTGAAGGACATGACTCCCGAGCAACGTGGCGACGCGCTCAACTC
TCAGGAGGACCTCAACGATCTCCACAACAGCAGTGCAGTTCAGGGGGCAA
CTGAGGTGAAGGTGGAGGGGGTCGAGCACCACTTCATTTGCTTCACATCC
ATCGAGGGCCACCTCTTCGAGCTGGACGGGAGGAAGTCGGGTCCTGTGTG
TCATGGTGAGATCAAGGAGGCGAGCATGCTGCACGCCGCCGCCCGGGTCA
TCAAGGAGGCCTACATTGCGCCCAACCCCGACCTCTGCGAGTTCGCAATG
ATGAGCCTTGCCCCCGCCCAGTGA
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