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Homology
BLAST of mRNA_M-pyrifera_M_contig76341.17997.1 vs. uniprot
Match: I0YXR6_COCSC (SUMO-activating enzyme 1B n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YXR6_COCSC) HSP 1 Score: 65.5 bits (158), Expect = 1.210e-8 Identity = 75/295 (25.42%), Postives = 130/295 (44.07%), Query Frame = 1 Query: 1 SQVAKNLALSGF-SITVADERPATKAPGLALLSGLPLTDGVCGGVEEGLTVGEMAVRSLSALNPLAKMAAV--SFEDHSD-EFLKSFDLIVASRMSLSEAVALGSRCRHLGVNFTTIRSHGPFSVVIQD-HGSDFAYVLDEKQGVDGAEGKKGDESSEVRHVSFPTIEDAVAFSAWSSISHRLSHPLFLALCVLDDSIRVDDDVEGRYH--------EERVREKLCAKGCDDAWHDSTISFL------SELLPVWSTVDYAAAA--------IAGGEIALDLIRLVSHRGEPACN 804
++V +N+AL+G S+T+ D+ P K+ A +P E+G +V E + +L +NPL K+AA+ S D EFL+ F++++ + S + + CR LGV F T S G S + H ++ ++ + ++FP++ A++ W ++ R +H L L V D + GR+ +ER E L A C A D+ L +++P +Y A + GG +A ++++ VSH+GEP N
Sbjct: 44 AEVCQNIALAGVGSLTLLDDAPC-KSEAAACNFLVPAD------AEQGQSVAEASAATLREMNPLVKIAALPGSLPPIPDPEFLRGFEVVLITSAPFSTLLQYDAACRQLGVAFFTASSRGSTSFFFANLHTHEYTPLVCPSCAL----------------IAFPSLASALS-QPWKTLRARYTHKLVYVLRVCADF----ESHAGRFPTAEDLPALQERAHE-LAADACAAAAADANGGPLPRDLIGEDVMPADILEEYVTGASELAPINAVLGGVLANEVLKAVSHKGEPVKN 309
BLAST of mRNA_M-pyrifera_M_contig76341.17997.1 vs. uniprot
Match: A0A8J9WQT5_9CHLO (SUMO-activating enzyme subunit 1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WQT5_9CHLO) HSP 1 Score: 56.6 bits (135), Expect = 1.210e-5 Identity = 75/294 (25.51%), Postives = 126/294 (42.86%), Query Frame = 1 Query: 1 SQVAKNLALSGF-SITVADERPATKAPGLALLSGLPLTDGVCGGVEEGLTVGEMAVRSLSALNPLAKMAAV--SFEDHSD-EFLKSFDLIVASRMSLSEAVALGSRCRHLGVNFTTIRSHGPFSVVIQDHGSDFAYVLDEKQGVDGAEGKKGDESSEVRHVSFPTIEDAVAFSAWSSISHRLSHPLFLALCVLDDSIRVDDDVEGRYH--------EERVREKLCAKGCDDAWHDSTIS------FLSELLPVWSTVDYAAA--------AIAGGEIALDLIRLVSHRGEPACN 804
++VAKN+AL+G S+T+ D+ A A+ + L D ++ +V E++ +L +NPL K+ A+ S D +FL+ F++++ + S + + CR LGV F S G S + S LD G E +FP++ A++ W ++ R +H L L V D + GR+ +ER RE L A A D + +++P +Y A+ GG +A ++++ VSH+GEP N
Sbjct: 44 AEVAKNIALAGVGSLTLLDD--ALCKSEAAVCNFLIPAD-----ADQAQSVAEVSAATLREMNPLVKITALPGSLPPIPDIDFLRGFEVVLITSAPFSTLLQYDAACRQLGVAFFMAASRGSTSFFFANLHSHEYTPLDTPAG----------EVPPKAVSAFPSLASALS-QPWKTMRARYTHKLVYVLRVCADF----ESHTGRFPTAADLPALQERARE-LAADARAAALADPASAPPPRDLITEDVMPADILEEYVTGTVELPPINAVLGGVLANEVLKAVSHKGEPVNN 314
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Viridiplantae |
Seed ortholog score | 70.9 |
Seed ortholog evalue | 1.1e-09 |
Seed eggNOG ortholog | 3656.XP_008439894.1 |
Preferred name | SAE1A |
KEGG ko | ko:K10684 |
KEGG Pathway | ko04120,map04120 |
Hectar predicted targeting category | other localisation |
GOs | GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008641,GO:0009987,GO:0016874,GO:0016877,GO:0016925,GO:0018193,GO:0018205,GO:0019538,GO:0019948,GO:0032446,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0070647,GO:0071704,GO:1901564 |
EggNOG free text desc. | SUMO-activating enzyme subunit |
EggNOG OGs | 37PEC@33090,3GGIW@35493,4JDPC@91835,COG0476@1,KOG2014@2759 |
EC | 6.2.1.45 |
COG Functional cat. | O |
Best tax level | fabids |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko01000,ko04121 |
Exons | 1 |
Model size | 804 |
Cds size | 804 |
Stop | 0 |
Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816662.7419121-CDS-M-pyrifera_M_contig76341:212..1016 | 1622816662.7419121-CDS-M-pyrifera_M_contig76341:212..1016 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig76341 213..1016 - |
1692278105.519756-CDS-M-pyrifera_M_contig76341:212..1016 | 1692278105.519756-CDS-M-pyrifera_M_contig76341:212..1016 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig76341 213..1016 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig76341.17997.1 >prot_M-pyrifera_M_contig76341.17997.1 ID=prot_M-pyrifera_M_contig76341.17997.1|Name=mRNA_M-pyrifera_M_contig76341.17997.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=268bp
SQVAKNLALSGFSITVADERPATKAPGLALLSGLPLTDGVCGGVEEGLTV GEMAVRSLSALNPLAKMAAVSFEDHSDEFLKSFDLIVASRMSLSEAVALG SRCRHLGVNFTTIRSHGPFSVVIQDHGSDFAYVLDEKQGVDGAEGKKGDE SSEVRHVSFPTIEDAVAFSAWSSISHRLSHPLFLALCVLDDSIRVDDDVE GRYHEERVREKLCAKGCDDAWHDSTISFLSELLPVWSTVDYAAAAIAGGE IALDLIRLVSHRGEPACN back to topmRNA from alignment at M-pyrifera_M_contig76341:213..1016- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig76341.17997.1 ID=mRNA_M-pyrifera_M_contig76341.17997.1|Name=mRNA_M-pyrifera_M_contig76341.17997.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=804bp|location=Sequence derived from alignment at M-pyrifera_M_contig76341:213..1016- (Macrocystis pyrifera P11B4 male) TCGCAGGTTGCAAAGAACTTGGCATTGAGCGGGTTTAGTATTACAGTTGC
TGATGAGAGGCCTGCAACCAAAGCACCAGGTTTGGCACTTCTTTCGGGGC
TTCCGTTGACTGATGGTGTATGTGGGGGTGTTGAAGAGGGGTTGACTGTT
GGAGAAATGGCTGTACGCTCACTATCAGCGTTGAACCCGCTTGCTAAGAT
GGCAGCCGTCTCTTTCGAGGACCATAGTGATGAATTTCTAAAGTCCTTTG
ACTTGATTGTTGCTTCCCGCATGTCATTGTCAGAGGCTGTTGCGTTGGGG
TCTCGATGTCGGCACCTAGGGGTGAATTTTACTACCATTCGAAGCCATGG
ACCTTTTTCCGTTGTGATACAAGACCATGGATCAGATTTTGCATATGTTT
TGGATGAAAAACAAGGAGTGGATGGAGCAGAGGGGAAGAAAGGTGATGAG
AGTAGCGAGGTGCGTCATGTTTCCTTCCCAACCATCGAAGACGCAGTTGC
GTTCTCTGCATGGAGTTCTATCTCACATCGACTATCTCACCCACTATTTC
TTGCATTGTGTGTTCTTGATGACAGTATTAGGGTGGATGATGACGTGGAA
GGCCGATATCATGAGGAACGAGTGCGGGAAAAGCTTTGTGCCAAAGGCTG
TGATGATGCTTGGCATGACTCTACCATATCCTTTCTTTCTGAACTTCTTC
CAGTATGGTCCACTGTAGACTATGCAGCAGCTGCCATTGCTGGTGGAGAA
ATTGCTCTTGACCTCATTCGTCTCGTATCACACCGTGGTGAACCTGCATG
CAAT back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig76341:213..1016- >mRNA_M-pyrifera_M_contig76341.17997.1 ID=mRNA_M-pyrifera_M_contig76341.17997.1|Name=mRNA_M-pyrifera_M_contig76341.17997.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1608bp|location=Sequence derived from alignment at M-pyrifera_M_contig76341:213..1016- (Macrocystis pyrifera P11B4 male) TCGCAGGTTGCAAAGAACTTGGCATTGAGCGGGTTTAGTATTACAGTTGC TGATGAGAGGCCTGCAACCAAAGCACCAGGTTTGGCACTTCTTTCGGGGC TTCCGTTGACTGATGGTGTATGTGGGGGTGTTGAAGAGGGGTTGACTGTT GGAGAAATGGCTGTACGCTCACTATCAGCGTTGAACCCGCTTGCTAAGAT GGCAGCCGTCTCTTTCGAGGACCATAGTGATGAATTTCTAAAGTCCTTTG ACTTGATTGTTGCTTCCCGCATGTCATTGTCAGAGGCTGTTGCGTTGGGG TCTCGATGTCGGCACCTAGGGGTGAATTTTACTACCATTCGAAGCCATGG ACCTTTTTCCGTTGTGATACAAGACCATGGATCAGATTTTGCATATGTTT TGGATGAAAAACAAGGAGTGGATGGAGCAGAGGGGAAGAAAGGTGATGAG AGTAGCGAGGTGCGTCATGTTTCCTTCCCAACCATCGAAGACGCAGTTGC GTTCTCTGCATGGAGTTCTATCTCACATCGACTATCTCACCCACTATTTC TTGCATTGTGTGTTCTTGATGACAGTATTAGGGTGGATGATGACGTGGAA GGCCGATATCATGAGGAACGAGTGCGGGAAAAGCTTTGTGCCAAAGGCTG TGATGATGCTTGGCATGACTCTACCATATCCTTTCTTTCTGAACTTCTTC CAGTATGGTCCACTGTAGACTATGCAGCAGCTGCCATTGCTGGTGGAGAA ATTGCTCTTGACCTCATTCGTCTCGTATCACACCGTGGTGAACCTGCATG CAATTCGCAGGTTGCAAAGAACTTGGCATTGAGCGGGTTTAGTATTACAG TTGCTGATGAGAGGCCTGCAACCAAAGCACCAGGTTTGGCACTTCTTTCG GGGCTTCCGTTGACTGATGGTGTATGTGGGGGTGTTGAAGAGGGGTTGAC TGTTGGAGAAATGGCTGTACGCTCACTATCAGCGTTGAACCCGCTTGCTA AGATGGCAGCCGTCTCTTTCGAGGACCATAGTGATGAATTTCTAAAGTCC TTTGACTTGATTGTTGCTTCCCGCATGTCATTGTCAGAGGCTGTTGCGTT GGGGTCTCGATGTCGGCACCTAGGGGTGAATTTTACTACCATTCGAAGCC ATGGACCTTTTTCCGTTGTGATACAAGACCATGGATCAGATTTTGCATAT GTTTTGGATGAAAAACAAGGAGTGGATGGAGCAGAGGGGAAGAAAGGTGA TGAGAGTAGCGAGGTGCGTCATGTTTCCTTCCCAACCATCGAAGACGCAG TTGCGTTCTCTGCATGGAGTTCTATCTCACATCGACTATCTCACCCACTA TTTCTTGCATTGTGTGTTCTTGATGACAGTATTAGGGTGGATGATGACGT GGAAGGCCGATATCATGAGGAACGAGTGCGGGAAAAGCTTTGTGCCAAAG GCTGTGATGATGCTTGGCATGACTCTACCATATCCTTTCTTTCTGAACTT CTTCCAGTATGGTCCACTGTAGACTATGCAGCAGCTGCCATTGCTGGTGG AGAAATTGCTCTTGACCTCATTCGTCTCGTATCACACCGTGGTGAACCTG CATGCAAT back to top
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