mRNA_M-pyrifera_M_contig75961.17921.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig75961.17921.1 vs. uniprot
Match: A0A7S1CGZ1_9STRA (Poly(A) polymerase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CGZ1_9STRA) HSP 1 Score: 104 bits (260), Expect = 1.220e-21 Identity = 83/273 (30.40%), Postives = 124/273 (45.42%), Query Frame = 1 Query: 1 IDDAKMPIVSFLLEGCHFELQYAWL-RGPVGEKAPLQIRTSFDALSHVPSKLLGTLDHRSLPTIKGLRDLQMFQRLVPNSALFCSTLNAVRVWAKARGIYSAKFGFLGGYMWNILVGHVILENTGLSSWQEALCAFFRTYHNWKWEVDVVSLEPLDRG----------QIRDKGM-VKIASTTSPYKGVARNVKLPTFLLLCDEFRRAD----RILTNCCDPASWCEVFDTANLFADSDSLFVRVYVCSASLEELQEWQGYVSSRIVRALEDL 771 I DA++PI+ +G +L + L R V E L + ++L LD S+ +I G R + +LVP+ F L AVR WAK RG+YS K GFLGG +NI+V V L L FF Y W+W V+ E + R+K + I + P + NV T ++ DEF+R RI+ D W E+F + F DS +++V + + E L+EW G+V SR+ R ++ + Sbjct: 145 IRDARVPIIGLKFDGVDLDLLFVLLTRSSVPE-----------TLDILDDEILVGLDDASVASINGPRVTDLIIKLVPDLENFKLCLRAVRHWAKKRGVYSNKIGFLGGVNFNIMVAFVCQLYPNLPP-AALLLRFFTLYAQWRWPQPVMLCENYETSLGLPVWNPEKNHREKFQRMPIITPAYPASNSSFNVTNSTLKIMRDEFKRGGEVMARIMEQPPDEMDWDELFTPTDFFTRYDS-YLQVDATAGTAEGLEEWAGWVESRLRRLVDTI 404
BLAST of mRNA_M-pyrifera_M_contig75961.17921.1 vs. uniprot
Match: A0A5D6XFN5_9STRA (Polynucleotide adenylyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XFN5_9STRA) HSP 1 Score: 100 bits (250), Expect = 5.450e-20 Identity = 78/277 (28.16%), Postives = 122/277 (44.04%), Query Frame = 1 Query: 10 AKMPIVSFLLEGCHFELQYAWLRGPVGEKAPLQIRTSFDALSHVP---SKLLGTLDHRSLPTIKGLRDLQMFQRLVPNSALFCSTLNAVRVWAKARGIYSAKFGFLGGYMWNILVGHV--ILENTGLSSWQEALCAFFRTYHNWKWEVDVVSLEPLDRGQIRD-------------KGMVKIASTTSPYKGVARNVKLPTFLLLCDEFRRADRILTNC-----CDPASWCEVFDTANLFADSDSLFVRVYVCSASLEELQEWQGYVSSRIVRALEDL 771 A MPI++F L G +L +A PV K HVP ++L +D S+ + R + LVPN + F S L VR+WAK RG+YS+K GFLGG W +LV V + +SS + FF + +W+W V+ +P + ++ ++ I + P + NV T +L +EF R +I+ PA W ++F D +V V + + + L EW +V+SR + +E L Sbjct: 121 AAMPILAFQLNGIRVDLLFARYSQPVVPK-------------HVPIHSDQVLVGMDATSIRALSVPRVASLVLELVPNGSTFRSCLRIVRLWAKRRGVYSSKAGFLGGISWTVLVAFVCQMFPKAAVSS---VVHRFFAIFSSWRWPTPVLISKPYEAPELESCAQWSPQRNLHDRSHVMPIITPGFPAVNSSVNVNASTLRILQEEFARGKQIMDEMQAKGLSSPAVWHKLFAPTEFMVRYDH-YVVVELRAGDEDALSEWANFVASRTRKLVETL 380
BLAST of mRNA_M-pyrifera_M_contig75961.17921.1 vs. uniprot
Match: A0A804KCI1_MUSAM (Polynucleotide adenylyltransferase n=2 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804KCI1_MUSAM) HSP 1 Score: 100 bits (250), Expect = 6.540e-20 Identity = 76/255 (29.80%), Postives = 122/255 (47.84%), Query Frame = 1 Query: 1 IDDAKMPIVSFLLEGCHFELQYAWLRGPVGEKAPLQIRTSFDALSHVPSKLLGTLDHRSLPTIKGLRDLQMFQRLVPNSALFCSTLNAVRVWAKARGIYSAKFGFLGGYMWNILVGHVILENTGLSSWQEALCAFFRTYHNWKWEVDVVSLEPLDRGQIRD-KGMVKIASTTSPYKGVARNVKLPTFLLLCDEFRRADRILTNCCDPAS----WCEVFDTANLFADSDSLFVRVYVCSASLEELQEWQGYVSSRI 750 + AK+P++ F G + YA R P + + S + PS +L +D S ++ G+R + +LVPN F S L V++WA+ RG+YS FGF GG IL +V S+ LC FF T+ W W VV +P + D + ++ I SP++ N+ T+ + EF+ +LT DP W +F+ A + + F+++ + + + +ELQEW G+V SRI Sbjct: 201 VKSAKVPLMRFKFNGISIDFPYA--RIPA-----ISVTESVNVFD--PS-VLAQVDDTSWRSLSGVRANKRILQLVPNLKNFQSMLRCVKLWARRRGVYSHLFGFFGGIHLAILAAYVCQRYPNASA-SALLCLFFETFSKWPWPEPVVLNDPSIPYRHPDGRSVMPIMMPCSPFEWCHSNITRSTYKKIVSEFQYG-YVLTRLQDPGRMEFRWNNLFE-AYPYTTKHTHFLQILLTADNDDELQEWVGWVKSRI 442
BLAST of mRNA_M-pyrifera_M_contig75961.17921.1 vs. uniprot
Match: A0A388KJ01_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KJ01_CHABU) HSP 1 Score: 101 bits (251), Expect = 7.640e-20 Identity = 75/259 (28.96%), Postives = 121/259 (46.72%), Query Frame = 1 Query: 1 IDDAKMPIVSFLLEGCHFELQYAWLRGPVGEKAPLQIRTSFDALSHVPSKLLGTLDHRSLPTIKGLRDLQMFQRLVPNSALFCSTLNAVRVWAKARGIYSAKFGFLGGYMWNILVGHVILENTGLSSWQEALCAFFRTYHNWKWEVDVVSLEPLDRGQI-----------RDK-GMVKIASTTSPYKGVARNVKLPTFLLLCDEFRRADRILTNCC-DPASWCEVFDTANLFADSDSLFVRVYVCSASLEELQEWQGYV 738 + DA +P++ F +L YA L + + D L +L ++D +S+ + G R +LVPN F + L++V++WA RG+YS KFGFLGG W +LV V + L FFR Y W+W D V L P++ G + RDK ++ I + P + NV TF ++ EFRR + W E+F+ A F + + F+++ V + S+E+ + W G++ Sbjct: 22 VPDAHVPVMKFKFNDISIDLLYA----------RLDLLSIPDDLDLGVDDMLESVDEKSISGLDGCRVADAILKLVPNVDHFRTALHSVKLWASKRGVYSKKFGFLGGVSWALLVARVCQLYPAATPTM-LLGLFFRVYDFWRWP-DPVKLCPIEEGSLGLAVWDPLRNPRDKYHLMPIITPAYPCSNSSYNVLESTFGVMRAEFRRGREVWEEIARGECGWEELFE-AYPFFEQYNYFLQIDVKACSVEDRRSWAGWI 267
BLAST of mRNA_M-pyrifera_M_contig75961.17921.1 vs. uniprot
Match: H3GWB8_PHYRM (Polynucleotide adenylyltransferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GWB8_PHYRM) HSP 1 Score: 100 bits (249), Expect = 1.010e-19 Identity = 76/271 (28.04%), Postives = 128/271 (47.23%), Query Frame = 1 Query: 10 AKMPIVSFLLEGCHFELQYAWLRGPVGEKAPLQIRTSFDALSHVPSKLLGTLDHRSLPTIKGLRDLQMFQRLVPNSALFCSTLNAVRVWAKARGIYSAKFGFLGGYMWNILVGHVILENTGLSSWQEALCAFFRTYHNWKWEVDVVSLEPLDRGQ-----------IRDKG-MVKIASTTSPYKGVARNVKLPTFLLLCDEFRRADRILTNC-----CDPASWCEVFDTANLFADSDSLFVRVYVCSASLEELQEWQGYVSSRIVRALEDL 771 A +P++SF L G +L +A +K + F L +++ +D S+ ++ R + LVPN+++F S L +R+WAK RG+YS K GFLGG W +LV V + +S + FF +W+W ++ P + G+ I D+ ++ I + P A NV + T +L +EF R RI+ + P+SW ++F + + D V + + + S E L EW +V+SR + +E L Sbjct: 270 AAVPVLSFQLSGVRVDLLFA----RYAQKQAVPKHLPF--LPGDDMQVMCGMDATSVRSLSVARVASLILELVPNASVFRSCLRVIRLWAKRRGLYSNKAGFLGGISWALLVCFVC-QMFPRASVASLVHRFFSVLTSWRWPTPILVAHPSNGGKVDNVQWDPQHNIHDRAHLMPIITPGFPAVNTAVNVNISTLRVLREEFARGQRIMDDLRRRSLSHPSSWNQLFASTEVLVRYDH-HVAIELRAPSEEALAEWSSFVASRTRKLVETL 532
BLAST of mRNA_M-pyrifera_M_contig75961.17921.1 vs. uniprot
Match: A0A6S8ECN3_9STRA (Polynucleotide adenylyltransferase n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8ECN3_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 2.360e-19 Identity = 73/230 (31.74%), Postives = 106/230 (46.09%), Query Frame = 1 Query: 151 LLGTLDHRSLPTIKGLRDLQMFQRLVPNSALFCSTLNAVRVWAKARGIYSAKFGFLGGYMWNILVGHVI-LENTGLSSWQEALCAFFRTYHNWKW----------EVDVVSLEPLDRGQIRDKG--MVKIASTTSPYKGVARNVKLPTFLLLCDEFRRADRILTNCCDPA--------SWCEVFDTANLFADSDSLFVRVYVCSASLEE--LQEWQGYVSSRIVRALEDL 771 +L LD + +I G R ++ +L+PN A F L VR+WAK RG+YS K GFLGG W ILV V L T + L FF Y WKW EVD + ++ D R + ++ I + P + + NV T ++ EF+R I+ CD W +F+ + F + +V V + + EE L W GY+ SRI + +E L Sbjct: 32 ILKGLDDATTKSINGPRVTELIAKLIPNPATFALVLRCVRLWAKQRGVYSNKMGFLGGVNWAILVAFVCQLFPTAAPA--RLLQKFFSLYQEWKWPTEIRLCHPYEVDYLDMKQWDPTVDRSEKYHVMPIITPAYPCQNSSYNVSHSTLDIMLGEFKRGKEIVKEICDKGWDDQRTKEEWATLFEPSEFFLRYGT-YVVVQASAPANEEKMLHAWVGYIESRIRKLVEYL 258
BLAST of mRNA_M-pyrifera_M_contig75961.17921.1 vs. uniprot
Match: A0A8K1FLT2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FLT2_PYTOL) HSP 1 Score: 98.6 bits (244), Expect = 3.900e-19 Identity = 76/275 (27.64%), Postives = 121/275 (44.00%), Query Frame = 1 Query: 10 AKMPIVSFLLEGCHFELQYA-WLRGPVGEKAPLQIRTSFDALSHVPSKLLGTLDHRSLPTIKGLRDLQMFQRLVPNSALFCSTLNAVRVWAKARGIYSAKFGFLGGYMWNILVGHV--ILENTGLSSWQEALCAFFRTYHNWKWEVDVVSLEPLDRGQI------------RDKG-MVKIASTTSPYKGVARNVKLPTFLLLCDEFRRA-----DRILTNCCDPASWCEVFDTANLFADSDSLFVRVYVCSASLEELQEWQGYVSSRIVRALEDL 771 A PI++F L G +L +A + + V + P+ ++L +D S+ +I R + LVPN + F S L +R+WAK RG+YS K GFLGG W ILV + + +SS + FF W W ++ +P D + D+G ++ I + P + NV + T +L +E R D + PA W ++F + D V + + + S +E+ EW YVSSR + +E L Sbjct: 179 ATAPILAFQLNGVRIDLLFARYTQDIVPKNLPIH-----------SDRILAGMDATSIRSISIPRVASLILELVPNGSAFRSCLRIIRLWAKRRGLYSNKAGFLGGISWTILVAFICQMFPKATISS---VVHRFFSVLSTWNWPTPILLSKPYDCSAVDNCIQWSPQNNHHDRGHLMPIITPGFPAVNSSVNVNVSTLRILQEELERGKYIMDDMLAKGLSSPAVWQKLFAPSEFLVRYDHYLV-IELRANSDDEMSEWSNYVSSRTRKLVETL 438
BLAST of mRNA_M-pyrifera_M_contig75961.17921.1 vs. uniprot
Match: A0A2D4BW41_PYTIN (Poly(A) polymerase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW41_PYTIN) HSP 1 Score: 98.2 bits (243), Expect = 5.660e-19 Identity = 77/275 (28.00%), Postives = 120/275 (43.64%), Query Frame = 1 Query: 10 AKMPIVSFLLEGCHFELQYAWLRGPVGEKAPLQIRTSFDALSHVPSKLLGTLDHRSLPTIKGLRDLQMFQRLVPNSALFCSTLNAVRVWAKARGIYSAKFGFLGGYMWNILVGHV--ILENTGLSSWQEALCAFFRTYHNWKWEVDVVSLEPLDRGQIRDKGM--------------VKIASTTSPYKGVARNVKLPTFLLLCDEFRRADRILTNCC-----DPASWCEVFDTANLFADSDSLFVRVYVCSASLEELQEWQGYVSSRIVRALEDL 771 A +PI+SF L G +L YA V P + T D +L +D S+ ++ R + LVPN + F S L +R+WAK RGIYS K GFLGG W +LV + + L+S + FF +W W ++ P + D + + I + P + NV + T ++ +E R ++L PA W +F + L D +V + + +A+ ++L EW YVSSR + +E L Sbjct: 222 AAVPILSFQLHGVRVDLLYARFTQDV---VPKHLSTHSD-------HILAGMDVASIRSLSVPRVASLILELVPNDSAFRSCLRIIRLWAKRRGIYSNKAGFLGGVSWTVLVAFICQMFPKATLAS---VIHRFFSVLSSWSWPTPILLTTPYECPPGVDSSLQWCPQKNHHDRAHLMPIITPGFPAVNSSVNVNVSTLRIIKEELERGKQLLDEMLAKGLSSPAVWHRLFAPSELLVRYDH-YVVMELRAATEDDLHEWANYVSSRTRKLVESL 482
BLAST of mRNA_M-pyrifera_M_contig75961.17921.1 vs. uniprot
Match: A0A835ZG61_9STRA (Polynucleotide adenylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG61_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 6.020e-19 Identity = 79/269 (29.37%), Postives = 124/269 (46.10%), Query Frame = 1 Query: 1 IDDAKMPIVSFLLEGCHFELQYAWLRGPVGEKAPLQIRTSFDALSHVPSKLLGTLDHRSLPTIKGLRDLQMFQRLVPNSALFCSTLNAVRVWAKARGIYSAKFGFLGGYMWNILVGHVILENTGLSSWQEALCAFFRTYHNWKWEVDVVSLEPLDRG---QIRDKG-----MVKIASTTSPYKGVARNVKLPTFLLLCDEFRRAD----RILTNCCDPASWCEVFDTANLFADSDSLFVRVYVCSASLEELQEWQGYVSSRIVRALEDL 771 I+ A +PI++F +G + +L L PV E DA+ L +D + + G R + RLVPN A F + VRVWAK RGIY K G+LGG +NILV + +S + L +FF+ H+W W + P D Q+ ++ I + P + V + ++ EFRR D R+L + ASW E+ + FA S ++ + V + EE + W+GY+ SR+ + L++ Sbjct: 138 IETAAVPIMTFDFDGVNIDLGLGCL--PV-ESVSEDFNIDDDAV-------LKGVDSATEKCLNGPRVTNLIHRLVPNYASFLPVVRLVRVWAKRRGIYGNKMGYLGGVNFNILVAFAC-QLYPRASPSKLLASFFKVMHSWAWPNPIHLTRPHDAALGLQVWQAAQNPWHVMPIITPAYPAMNSSLAVSAHSLEVMRREFRRGDAICRRVLDGGAEGASWDELVRPSEFFA-MYSHYLAIDVMAGGEEEFRGWRGYMESRVRKLLDNF 394
BLAST of mRNA_M-pyrifera_M_contig75961.17921.1 vs. uniprot
Match: A0A5D6Y2P8_9STRA (Polynucleotide adenylyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2P8_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 6.450e-19 Identity = 87/272 (31.99%), Postives = 131/272 (48.16%), Query Frame = 1 Query: 1 IDDAKMPIVSFLLEGCHFELQYAWL-RGPVGEKAPLQIRTSFDALSHVPSKLLGTLDHRSLPTIKGLRDLQMFQRLVPNSALFCSTLNAVRVWAKARGIYSAKFGFLGGYMWNILVGHVI-LENTGLSSWQEALCAFFRTYHNWKWEVDV---------VSLEPLDRGQIRDKGMVK-IASTTSPYKGVARNVKLPTFLLLCDEFRRADRILTNCCDP--ASWCEVFDTANLFADSDSLFVRVYVCSASLEELQEWQGYVSSRIVRALEDLA 774 I+ A +PI++F E + +LQ A L R V P I DA+ LLG +D + ++ G R ++ +L PN F S L VR WAK RG+YS K G+LGG W ILV + L T S L FF NWKW + + + LE + ++ V I + P + NV T ++ DE +RA I+ + + A W ++F+ ++ FA ++ V V +A+ +E Q W G+ SRI + +E LA Sbjct: 143 IEGAVVPIITFDYEEINIDLQIAILPRNAV----PDTINILDDAV------LLG-VDTATEKSLNGPRVTELMIKLTPNRESFISVLRVVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPS--TLLLRFFMVLANWKWPLAIQLCKTHDAKLGLEVWNANSGNNRYQVMPILTPAYPSMNSSFNVSTHTLAVMKDELKRALGIVQDILNKGGADWSQLFEPSDFFAVHQH-YLAVDVYTATADEEQAWCGFCESRIRKLVESLA 400 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75961.17921.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig75961.17921.1 >prot_M-pyrifera_M_contig75961.17921.1 ID=prot_M-pyrifera_M_contig75961.17921.1|Name=mRNA_M-pyrifera_M_contig75961.17921.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=324bp MPIVSFLLEGCHFELQYAWLRGPVGEKAPLQIRTSFDALSHVPSKLLGTLback to top mRNA from alignment at M-pyrifera_M_contig75961:49..1035- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig75961.17921.1 ID=mRNA_M-pyrifera_M_contig75961.17921.1|Name=mRNA_M-pyrifera_M_contig75961.17921.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=987bp|location=Sequence derived from alignment at M-pyrifera_M_contig75961:49..1035- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig75961:49..1035- >mRNA_M-pyrifera_M_contig75961.17921.1 ID=mRNA_M-pyrifera_M_contig75961.17921.1|Name=mRNA_M-pyrifera_M_contig75961.17921.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1944bp|location=Sequence derived from alignment at M-pyrifera_M_contig75961:49..1035- (Macrocystis pyrifera P11B4 male)back to top |