mRNA_M-pyrifera_M_contig75961.17921.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig75961.17921.1
Unique NamemRNA_M-pyrifera_M_contig75961.17921.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig75961.17921.1 vs. uniprot
Match: A0A7S1CGZ1_9STRA (Poly(A) polymerase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CGZ1_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.220e-21
Identity = 83/273 (30.40%), Postives = 124/273 (45.42%), Query Frame = 1
Query:    1 IDDAKMPIVSFLLEGCHFELQYAWL-RGPVGEKAPLQIRTSFDALSHVPSKLLGTLDHRSLPTIKGLRDLQMFQRLVPNSALFCSTLNAVRVWAKARGIYSAKFGFLGGYMWNILVGHVILENTGLSSWQEALCAFFRTYHNWKWEVDVVSLEPLDRG----------QIRDKGM-VKIASTTSPYKGVARNVKLPTFLLLCDEFRRAD----RILTNCCDPASWCEVFDTANLFADSDSLFVRVYVCSASLEELQEWQGYVSSRIVRALEDL 771
            I DA++PI+    +G   +L +  L R  V E            L  +  ++L  LD  S+ +I G R   +  +LVP+   F   L AVR WAK RG+YS K GFLGG  +NI+V  V      L      L  FF  Y  W+W   V+  E  +              R+K   + I +   P    + NV   T  ++ DEF+R      RI+    D   W E+F   + F   DS +++V   + + E L+EW G+V SR+ R ++ +
Sbjct:  145 IRDARVPIIGLKFDGVDLDLLFVLLTRSSVPE-----------TLDILDDEILVGLDDASVASINGPRVTDLIIKLVPDLENFKLCLRAVRHWAKKRGVYSNKIGFLGGVNFNIMVAFVCQLYPNLPP-AALLLRFFTLYAQWRWPQPVMLCENYETSLGLPVWNPEKNHREKFQRMPIITPAYPASNSSFNVTNSTLKIMRDEFKRGGEVMARIMEQPPDEMDWDELFTPTDFFTRYDS-YLQVDATAGTAEGLEEWAGWVESRLRRLVDTI 404          
BLAST of mRNA_M-pyrifera_M_contig75961.17921.1 vs. uniprot
Match: A0A5D6XFN5_9STRA (Polynucleotide adenylyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XFN5_9STRA)

HSP 1 Score: 100 bits (250), Expect = 5.450e-20
Identity = 78/277 (28.16%), Postives = 122/277 (44.04%), Query Frame = 1
Query:   10 AKMPIVSFLLEGCHFELQYAWLRGPVGEKAPLQIRTSFDALSHVP---SKLLGTLDHRSLPTIKGLRDLQMFQRLVPNSALFCSTLNAVRVWAKARGIYSAKFGFLGGYMWNILVGHV--ILENTGLSSWQEALCAFFRTYHNWKWEVDVVSLEPLDRGQIRD-------------KGMVKIASTTSPYKGVARNVKLPTFLLLCDEFRRADRILTNC-----CDPASWCEVFDTANLFADSDSLFVRVYVCSASLEELQEWQGYVSSRIVRALEDL 771
            A MPI++F L G   +L +A    PV  K             HVP    ++L  +D  S+  +   R   +   LVPN + F S L  VR+WAK RG+YS+K GFLGG  W +LV  V  +     +SS    +  FF  + +W+W   V+  +P +  ++                 ++ I +   P    + NV   T  +L +EF R  +I+          PA W ++F         D  +V V + +   + L EW  +V+SR  + +E L
Sbjct:  121 AAMPILAFQLNGIRVDLLFARYSQPVVPK-------------HVPIHSDQVLVGMDATSIRALSVPRVASLVLELVPNGSTFRSCLRIVRLWAKRRGVYSSKAGFLGGISWTVLVAFVCQMFPKAAVSS---VVHRFFAIFSSWRWPTPVLISKPYEAPELESCAQWSPQRNLHDRSHVMPIITPGFPAVNSSVNVNASTLRILQEEFARGKQIMDEMQAKGLSSPAVWHKLFAPTEFMVRYDH-YVVVELRAGDEDALSEWANFVASRTRKLVETL 380          
BLAST of mRNA_M-pyrifera_M_contig75961.17921.1 vs. uniprot
Match: A0A804KCI1_MUSAM (Polynucleotide adenylyltransferase n=2 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804KCI1_MUSAM)

HSP 1 Score: 100 bits (250), Expect = 6.540e-20
Identity = 76/255 (29.80%), Postives = 122/255 (47.84%), Query Frame = 1
Query:    1 IDDAKMPIVSFLLEGCHFELQYAWLRGPVGEKAPLQIRTSFDALSHVPSKLLGTLDHRSLPTIKGLRDLQMFQRLVPNSALFCSTLNAVRVWAKARGIYSAKFGFLGGYMWNILVGHVILENTGLSSWQEALCAFFRTYHNWKWEVDVVSLEPLDRGQIRD-KGMVKIASTTSPYKGVARNVKLPTFLLLCDEFRRADRILTNCCDPAS----WCEVFDTANLFADSDSLFVRVYVCSASLEELQEWQGYVSSRI 750
            +  AK+P++ F   G   +  YA  R P      + +  S +     PS +L  +D  S  ++ G+R  +   +LVPN   F S L  V++WA+ RG+YS  FGF GG    IL  +V       S+    LC FF T+  W W   VV  +P    +  D + ++ I    SP++    N+   T+  +  EF+    +LT   DP      W  +F+ A  +    + F+++ + + + +ELQEW G+V SRI
Sbjct:  201 VKSAKVPLMRFKFNGISIDFPYA--RIPA-----ISVTESVNVFD--PS-VLAQVDDTSWRSLSGVRANKRILQLVPNLKNFQSMLRCVKLWARRRGVYSHLFGFFGGIHLAILAAYVCQRYPNASA-SALLCLFFETFSKWPWPEPVVLNDPSIPYRHPDGRSVMPIMMPCSPFEWCHSNITRSTYKKIVSEFQYG-YVLTRLQDPGRMEFRWNNLFE-AYPYTTKHTHFLQILLTADNDDELQEWVGWVKSRI 442          
BLAST of mRNA_M-pyrifera_M_contig75961.17921.1 vs. uniprot
Match: A0A388KJ01_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KJ01_CHABU)

HSP 1 Score: 101 bits (251), Expect = 7.640e-20
Identity = 75/259 (28.96%), Postives = 121/259 (46.72%), Query Frame = 1
Query:    1 IDDAKMPIVSFLLEGCHFELQYAWLRGPVGEKAPLQIRTSFDALSHVPSKLLGTLDHRSLPTIKGLRDLQMFQRLVPNSALFCSTLNAVRVWAKARGIYSAKFGFLGGYMWNILVGHVILENTGLSSWQEALCAFFRTYHNWKWEVDVVSLEPLDRGQI-----------RDK-GMVKIASTTSPYKGVARNVKLPTFLLLCDEFRRADRILTNCC-DPASWCEVFDTANLFADSDSLFVRVYVCSASLEELQEWQGYV 738
            + DA +P++ F       +L YA           L + +  D L      +L ++D +S+  + G R      +LVPN   F + L++V++WA  RG+YS KFGFLGG  W +LV  V       +     L  FFR Y  W+W  D V L P++ G +           RDK  ++ I +   P    + NV   TF ++  EFRR   +          W E+F+ A  F +  + F+++ V + S+E+ + W G++
Sbjct:   22 VPDAHVPVMKFKFNDISIDLLYA----------RLDLLSIPDDLDLGVDDMLESVDEKSISGLDGCRVADAILKLVPNVDHFRTALHSVKLWASKRGVYSKKFGFLGGVSWALLVARVCQLYPAATPTM-LLGLFFRVYDFWRWP-DPVKLCPIEEGSLGLAVWDPLRNPRDKYHLMPIITPAYPCSNSSYNVLESTFGVMRAEFRRGREVWEEIARGECGWEELFE-AYPFFEQYNYFLQIDVKACSVEDRRSWAGWI 267          
BLAST of mRNA_M-pyrifera_M_contig75961.17921.1 vs. uniprot
Match: H3GWB8_PHYRM (Polynucleotide adenylyltransferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GWB8_PHYRM)

HSP 1 Score: 100 bits (249), Expect = 1.010e-19
Identity = 76/271 (28.04%), Postives = 128/271 (47.23%), Query Frame = 1
Query:   10 AKMPIVSFLLEGCHFELQYAWLRGPVGEKAPLQIRTSFDALSHVPSKLLGTLDHRSLPTIKGLRDLQMFQRLVPNSALFCSTLNAVRVWAKARGIYSAKFGFLGGYMWNILVGHVILENTGLSSWQEALCAFFRTYHNWKWEVDVVSLEPLDRGQ-----------IRDKG-MVKIASTTSPYKGVARNVKLPTFLLLCDEFRRADRILTNC-----CDPASWCEVFDTANLFADSDSLFVRVYVCSASLEELQEWQGYVSSRIVRALEDL 771
            A +P++SF L G   +L +A       +K  +     F  L     +++  +D  S+ ++   R   +   LVPN+++F S L  +R+WAK RG+YS K GFLGG  W +LV  V  +    +S    +  FF    +W+W   ++   P + G+           I D+  ++ I +   P    A NV + T  +L +EF R  RI+ +        P+SW ++F +  +    D   V + + + S E L EW  +V+SR  + +E L
Sbjct:  270 AAVPVLSFQLSGVRVDLLFA----RYAQKQAVPKHLPF--LPGDDMQVMCGMDATSVRSLSVARVASLILELVPNASVFRSCLRVIRLWAKRRGLYSNKAGFLGGISWALLVCFVC-QMFPRASVASLVHRFFSVLTSWRWPTPILVAHPSNGGKVDNVQWDPQHNIHDRAHLMPIITPGFPAVNTAVNVNISTLRVLREEFARGQRIMDDLRRRSLSHPSSWNQLFASTEVLVRYDH-HVAIELRAPSEEALAEWSSFVASRTRKLVETL 532          
BLAST of mRNA_M-pyrifera_M_contig75961.17921.1 vs. uniprot
Match: A0A6S8ECN3_9STRA (Polynucleotide adenylyltransferase n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8ECN3_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.360e-19
Identity = 73/230 (31.74%), Postives = 106/230 (46.09%), Query Frame = 1
Query:  151 LLGTLDHRSLPTIKGLRDLQMFQRLVPNSALFCSTLNAVRVWAKARGIYSAKFGFLGGYMWNILVGHVI-LENTGLSSWQEALCAFFRTYHNWKW----------EVDVVSLEPLDRGQIRDKG--MVKIASTTSPYKGVARNVKLPTFLLLCDEFRRADRILTNCCDPA--------SWCEVFDTANLFADSDSLFVRVYVCSASLEE--LQEWQGYVSSRIVRALEDL 771
            +L  LD  +  +I G R  ++  +L+PN A F   L  VR+WAK RG+YS K GFLGG  W ILV  V  L  T   +    L  FF  Y  WKW          EVD + ++  D    R +   ++ I +   P +  + NV   T  ++  EF+R   I+   CD           W  +F+ +  F    + +V V   + + EE  L  W GY+ SRI + +E L
Sbjct:   32 ILKGLDDATTKSINGPRVTELIAKLIPNPATFALVLRCVRLWAKQRGVYSNKMGFLGGVNWAILVAFVCQLFPTAAPA--RLLQKFFSLYQEWKWPTEIRLCHPYEVDYLDMKQWDPTVDRSEKYHVMPIITPAYPCQNSSYNVSHSTLDIMLGEFKRGKEIVKEICDKGWDDQRTKEEWATLFEPSEFFLRYGT-YVVVQASAPANEEKMLHAWVGYIESRIRKLVEYL 258          
BLAST of mRNA_M-pyrifera_M_contig75961.17921.1 vs. uniprot
Match: A0A8K1FLT2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FLT2_PYTOL)

HSP 1 Score: 98.6 bits (244), Expect = 3.900e-19
Identity = 76/275 (27.64%), Postives = 121/275 (44.00%), Query Frame = 1
Query:   10 AKMPIVSFLLEGCHFELQYA-WLRGPVGEKAPLQIRTSFDALSHVPSKLLGTLDHRSLPTIKGLRDLQMFQRLVPNSALFCSTLNAVRVWAKARGIYSAKFGFLGGYMWNILVGHV--ILENTGLSSWQEALCAFFRTYHNWKWEVDVVSLEPLDRGQI------------RDKG-MVKIASTTSPYKGVARNVKLPTFLLLCDEFRRA-----DRILTNCCDPASWCEVFDTANLFADSDSLFVRVYVCSASLEELQEWQGYVSSRIVRALEDL 771
            A  PI++F L G   +L +A + +  V +  P+              ++L  +D  S+ +I   R   +   LVPN + F S L  +R+WAK RG+YS K GFLGG  W ILV  +  +     +SS    +  FF     W W   ++  +P D   +             D+G ++ I +   P    + NV + T  +L +E  R      D +      PA W ++F  +      D   V + + + S +E+ EW  YVSSR  + +E L
Sbjct:  179 ATAPILAFQLNGVRIDLLFARYTQDIVPKNLPIH-----------SDRILAGMDATSIRSISIPRVASLILELVPNGSAFRSCLRIIRLWAKRRGLYSNKAGFLGGISWTILVAFICQMFPKATISS---VVHRFFSVLSTWNWPTPILLSKPYDCSAVDNCIQWSPQNNHHDRGHLMPIITPGFPAVNSSVNVNVSTLRILQEELERGKYIMDDMLAKGLSSPAVWQKLFAPSEFLVRYDHYLV-IELRANSDDEMSEWSNYVSSRTRKLVETL 438          
BLAST of mRNA_M-pyrifera_M_contig75961.17921.1 vs. uniprot
Match: A0A2D4BW41_PYTIN (Poly(A) polymerase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW41_PYTIN)

HSP 1 Score: 98.2 bits (243), Expect = 5.660e-19
Identity = 77/275 (28.00%), Postives = 120/275 (43.64%), Query Frame = 1
Query:   10 AKMPIVSFLLEGCHFELQYAWLRGPVGEKAPLQIRTSFDALSHVPSKLLGTLDHRSLPTIKGLRDLQMFQRLVPNSALFCSTLNAVRVWAKARGIYSAKFGFLGGYMWNILVGHV--ILENTGLSSWQEALCAFFRTYHNWKWEVDVVSLEPLDRGQIRDKGM--------------VKIASTTSPYKGVARNVKLPTFLLLCDEFRRADRILTNCC-----DPASWCEVFDTANLFADSDSLFVRVYVCSASLEELQEWQGYVSSRIVRALEDL 771
            A +PI+SF L G   +L YA     V    P  + T  D        +L  +D  S+ ++   R   +   LVPN + F S L  +R+WAK RGIYS K GFLGG  W +LV  +  +     L+S    +  FF    +W W   ++   P +     D  +              + I +   P    + NV + T  ++ +E  R  ++L          PA W  +F  + L    D  +V + + +A+ ++L EW  YVSSR  + +E L
Sbjct:  222 AAVPILSFQLHGVRVDLLYARFTQDV---VPKHLSTHSD-------HILAGMDVASIRSLSVPRVASLILELVPNDSAFRSCLRIIRLWAKRRGIYSNKAGFLGGVSWTVLVAFICQMFPKATLAS---VIHRFFSVLSSWSWPTPILLTTPYECPPGVDSSLQWCPQKNHHDRAHLMPIITPGFPAVNSSVNVNVSTLRIIKEELERGKQLLDEMLAKGLSSPAVWHRLFAPSELLVRYDH-YVVMELRAATEDDLHEWANYVSSRTRKLVESL 482          
BLAST of mRNA_M-pyrifera_M_contig75961.17921.1 vs. uniprot
Match: A0A835ZG61_9STRA (Polynucleotide adenylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG61_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 6.020e-19
Identity = 79/269 (29.37%), Postives = 124/269 (46.10%), Query Frame = 1
Query:    1 IDDAKMPIVSFLLEGCHFELQYAWLRGPVGEKAPLQIRTSFDALSHVPSKLLGTLDHRSLPTIKGLRDLQMFQRLVPNSALFCSTLNAVRVWAKARGIYSAKFGFLGGYMWNILVGHVILENTGLSSWQEALCAFFRTYHNWKWEVDVVSLEPLDRG---QIRDKG-----MVKIASTTSPYKGVARNVKLPTFLLLCDEFRRAD----RILTNCCDPASWCEVFDTANLFADSDSLFVRVYVCSASLEELQEWQGYVSSRIVRALEDL 771
            I+ A +PI++F  +G + +L    L  PV E          DA+       L  +D  +   + G R   +  RLVPN A F   +  VRVWAK RGIY  K G+LGG  +NILV     +    +S  + L +FF+  H+W W   +    P D     Q+         ++ I +   P    +  V   +  ++  EFRR D    R+L    + ASW E+   +  FA   S ++ + V +   EE + W+GY+ SR+ + L++ 
Sbjct:  138 IETAAVPIMTFDFDGVNIDLGLGCL--PV-ESVSEDFNIDDDAV-------LKGVDSATEKCLNGPRVTNLIHRLVPNYASFLPVVRLVRVWAKRRGIYGNKMGYLGGVNFNILVAFAC-QLYPRASPSKLLASFFKVMHSWAWPNPIHLTRPHDAALGLQVWQAAQNPWHVMPIITPAYPAMNSSLAVSAHSLEVMRREFRRGDAICRRVLDGGAEGASWDELVRPSEFFA-MYSHYLAIDVMAGGEEEFRGWRGYMESRVRKLLDNF 394          
BLAST of mRNA_M-pyrifera_M_contig75961.17921.1 vs. uniprot
Match: A0A5D6Y2P8_9STRA (Polynucleotide adenylyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2P8_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 6.450e-19
Identity = 87/272 (31.99%), Postives = 131/272 (48.16%), Query Frame = 1
Query:    1 IDDAKMPIVSFLLEGCHFELQYAWL-RGPVGEKAPLQIRTSFDALSHVPSKLLGTLDHRSLPTIKGLRDLQMFQRLVPNSALFCSTLNAVRVWAKARGIYSAKFGFLGGYMWNILVGHVI-LENTGLSSWQEALCAFFRTYHNWKWEVDV---------VSLEPLDRGQIRDKGMVK-IASTTSPYKGVARNVKLPTFLLLCDEFRRADRILTNCCDP--ASWCEVFDTANLFADSDSLFVRVYVCSASLEELQEWQGYVSSRIVRALEDLA 774
            I+ A +PI++F  E  + +LQ A L R  V    P  I    DA+      LLG +D  +  ++ G R  ++  +L PN   F S L  VR WAK RG+YS K G+LGG  W ILV  +  L  T   S    L  FF    NWKW + +         + LE  +     ++  V  I +   P    + NV   T  ++ DE +RA  I+ +  +   A W ++F+ ++ FA     ++ V V +A+ +E Q W G+  SRI + +E LA
Sbjct:  143 IEGAVVPIITFDYEEINIDLQIAILPRNAV----PDTINILDDAV------LLG-VDTATEKSLNGPRVTELMIKLTPNRESFISVLRVVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPS--TLLLRFFMVLANWKWPLAIQLCKTHDAKLGLEVWNANSGNNRYQVMPILTPAYPSMNSSFNVSTHTLAVMKDELKRALGIVQDILNKGGADWSQLFEPSDFFAVHQH-YLAVDVYTATADEEQAWCGFCESRIRKLVESLA 400          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75961.17921.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1CGZ1_9STRA1.220e-2130.40Poly(A) polymerase n=1 Tax=Bicosoecida sp. CB-2014... [more]
A0A5D6XFN5_9STRA5.450e-2028.16Polynucleotide adenylyltransferase n=1 Tax=Pythium... [more]
A0A804KCI1_MUSAM6.540e-2029.80Polynucleotide adenylyltransferase n=2 Tax=Musa ac... [more]
A0A388KJ01_CHABU7.640e-2028.96Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
H3GWB8_PHYRM1.010e-1928.04Polynucleotide adenylyltransferase n=1 Tax=Phytoph... [more]
A0A6S8ECN3_9STRA2.360e-1931.74Polynucleotide adenylyltransferase n=1 Tax=Aplanoc... [more]
A0A8K1FLT2_PYTOL3.900e-1927.64Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BW41_PYTIN5.660e-1928.00Poly(A) polymerase n=1 Tax=Pythium insidiosum TaxI... [more]
A0A835ZG61_9STRA6.020e-1929.37Polynucleotide adenylyltransferase n=1 Tax=Tribone... [more]
A0A5D6Y2P8_9STRA6.450e-1931.99Polynucleotide adenylyltransferase n=1 Tax=Pythium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig75961contigM-pyrifera_M_contig75961:49..1035 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score107.5
Seed ortholog evalue1.2e-20
Seed eggNOG ortholog3218.PP1S3_426V6.1
KEGG koko:K14376
KEGG Pathwayko03015,map03015
Hectar predicted targeting categoryother localisation
EggNOG free text desc.interspecies interaction between organisms
EggNOG OGs37HS4@33090,3G7CK@35493,COG5186@1,KOG2245@2759
EC2.7.7.19
COG Functional cat.A
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03019
Exons1
Model size987
Cds size972
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816658.8064797-CDS-M-pyrifera_M_contig75961:48..10201622816658.8064797-CDS-M-pyrifera_M_contig75961:48..1020Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig75961 49..1020 -
1692278103.3630853-CDS-M-pyrifera_M_contig75961:48..10201692278103.3630853-CDS-M-pyrifera_M_contig75961:48..1020Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig75961 49..1020 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816658.8191893-UTR-M-pyrifera_M_contig75961:1020..10351622816658.8191893-UTR-M-pyrifera_M_contig75961:1020..1035Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig75961 1021..1035 -
1692278103.3759325-UTR-M-pyrifera_M_contig75961:1020..10351692278103.3759325-UTR-M-pyrifera_M_contig75961:1020..1035Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig75961 1021..1035 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig75961.17921.1prot_M-pyrifera_M_contig75961.17921.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig75961 49..1020 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig75961.17921.1

>prot_M-pyrifera_M_contig75961.17921.1 ID=prot_M-pyrifera_M_contig75961.17921.1|Name=mRNA_M-pyrifera_M_contig75961.17921.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=324bp
MPIVSFLLEGCHFELQYAWLRGPVGEKAPLQIRTSFDALSHVPSKLLGTL
DHRSLPTIKGLRDLQMFQRLVPNSALFCSTLNAVRVWAKARGIYSAKFGF
LGGYMWNILVGHVILENTGLSSWQEALCAFFRTYHNWKWEVDVVSLEPLD
RGQIRDKGMVKIASTTSPYKGVARNVKLPTFLLLCDEFRRADRILTNCCD
PASWCEVFDTANLFADSDSLFVRVYVCSASLEELQEWQGYVSSRIVRALE
DLADAGHWARPVCYQWARVEPGSPFGCEFYLLIRKTSGGETAAYKETVPI
IQSAFEGWSRRTPTSAVQVEVLPR
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mRNA from alignment at M-pyrifera_M_contig75961:49..1035-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig75961.17921.1 ID=mRNA_M-pyrifera_M_contig75961.17921.1|Name=mRNA_M-pyrifera_M_contig75961.17921.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=987bp|location=Sequence derived from alignment at M-pyrifera_M_contig75961:49..1035- (Macrocystis pyrifera P11B4 male)
ATTGACGACGCGAAAATGCCCATAGTCTCCTTCCTTTTGGAAGGATGCCA CTTTGAGCTGCAGTATGCATGGCTGCGCGGACCAGTCGGAGAGAAGGCCC CACTGCAGATACGCACTTCCTTCGATGCTCTCTCTCATGTGCCCTCTAAA CTGTTGGGTACTTTGGACCACCGCTCCTTGCCAACGATCAAGGGCCTTCG AGACCTCCAGATGTTCCAACGTCTCGTGCCGAATTCTGCTCTGTTCTGCT CGACGCTCAACGCCGTACGGGTATGGGCGAAAGCTAGAGGGATCTATTCT GCCAAGTTCGGTTTCTTGGGTGGGTACATGTGGAATATTCTCGTGGGCCA CGTGATCTTGGAGAACACTGGCCTCAGCTCTTGGCAAGAAGCCTTGTGTG CATTCTTTCGCACATACCACAACTGGAAATGGGAAGTTGACGTTGTCTCA TTGGAGCCATTGGATCGCGGACAGATAAGAGATAAGGGAATGGTGAAGAT TGCTAGTACAACCAGTCCTTACAAAGGTGTGGCCAGGAACGTCAAACTCC CAACCTTCCTACTTCTATGCGACGAATTTCGCAGGGCTGATAGGATTCTG ACGAACTGTTGTGATCCTGCTAGCTGGTGCGAGGTTTTTGATACCGCCAA CCTCTTTGCTGACTCCGATTCCCTTTTTGTTCGTGTCTATGTGTGCTCCG CCTCTCTCGAAGAGCTCCAGGAGTGGCAAGGCTACGTCAGCTCTCGTATT GTGCGAGCTCTGGAAGACTTGGCCGATGCCGGCCATTGGGCAAGGCCTGT CTGCTATCAGTGGGCAAGAGTGGAGCCTGGTTCTCCATTTGGATGCGAGT TCTACCTCCTCATCAGGAAGACCAGCGGGGGTGAGACGGCAGCTTACAAG GAGACTGTGCCTATCATCCAGAGTGCCTTCGAGGGCTGGTCTAGGCGTAC ACCTACATCAGCCGTTCAAGTGGAAGTTTTGCCGCGT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig75961:49..1035-

>mRNA_M-pyrifera_M_contig75961.17921.1 ID=mRNA_M-pyrifera_M_contig75961.17921.1|Name=mRNA_M-pyrifera_M_contig75961.17921.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1944bp|location=Sequence derived from alignment at M-pyrifera_M_contig75961:49..1035- (Macrocystis pyrifera P11B4 male)
ATGCCCATAGTCTCCTTCCTTTTGGAAGGATGCCACTTTGAGCTGCAGTA
TGCATGGCTGCGCGGACCAGTCGGAGAGAAGGCCCCACTGCAGATACGCA
CTTCCTTCGATGCTCTCTCTCATGTGCCCTCTAAACTGTTGGGTACTTTG
GACCACCGCTCCTTGCCAACGATCAAGGGCCTTCGAGACCTCCAGATGTT
CCAACGTCTCGTGCCGAATTCTGCTCTGTTCTGCTCGACGCTCAACGCCG
TACGGGTATGGGCGAAAGCTAGAGGGATCTATTCTGCCAAGTTCGGTTTC
TTGGGTGGGTACATGTGGAATATTCTCGTGGGCCACGTGATCTTGGAGAA
CACTGGCCTCAGCTCTTGGCAAGAAGCCTTGTGTGCATTCTTTCGCACAT
ACCACAACTGGAAATGGGAAGTTGACGTTGTCTCATTGGAGCCATTGGAT
CGCGGACAGATAAGAGATAAGGGAATGGTGAAGATTGCTAGTACAACCAG
TCCTTACAAAGGTGTGGCCAGGAACGTCAAACTCCCAACCTTCCTACTTC
TATGCGACGAATTTCGCAGGGCTGATAGGATTCTGACGAACTGTTGTGAT
CCTGCTAGCTGGTGCGAGGTTTTTGATACCGCCAACCTCTTTGCTGACTC
CGATTCCCTTTTTGTTCGTGTCTATGTGTGCTCCGCCTCTCTCGAAGAGC
TCCAGGAGTGGCAAGGCTACGTCAGCTCTCGTATTGTGCGAGCTCTGGAA
GACTTGGCCGATGCCGGCCATTGGGCAAGGCCTGTCTGCTATCAGTGGGC
AAGAGTGGAGCCTGGTTCTCCATTTGGATGCGAGTTCTACCTCCTCATCA
GGAAGACCAGCGGGGGTGAGACGGCAGCTTACAAGGAGACTGTGCCTATC
ATCCAGAGTGCCTTCGAGGGCTGGTCTAGGCGTACACCTACATCAGCCGT
TCAAGTGGAAGTTTTGCCGCGTATGCCCATAGTCTCCTTCCTTTTGGAAG
GATGCCACTTTGAGCTGCAGTATGCATGGCTGCGCGGACCAGTCGGAGAG
AAGGCCCCACTGCAGATACGCACTTCCTTCGATGCTCTCTCTCATGTGCC
CTCTAAACTGTTGGGTACTTTGGACCACCGCTCCTTGCCAACGATCAAGG
GCCTTCGAGACCTCCAGATGTTCCAACGTCTCGTGCCGAATTCTGCTCTG
TTCTGCTCGACGCTCAACGCCGTACGGGTATGGGCGAAAGCTAGAGGGAT
CTATTCTGCCAAGTTCGGTTTCTTGGGTGGGTACATGTGGAATATTCTCG
TGGGCCACGTGATCTTGGAGAACACTGGCCTCAGCTCTTGGCAAGAAGCC
TTGTGTGCATTCTTTCGCACATACCACAACTGGAAATGGGAAGTTGACGT
TGTCTCATTGGAGCCATTGGATCGCGGACAGATAAGAGATAAGGGAATGG
TGAAGATTGCTAGTACAACCAGTCCTTACAAAGGTGTGGCCAGGAACGTC
AAACTCCCAACCTTCCTACTTCTATGCGACGAATTTCGCAGGGCTGATAG
GATTCTGACGAACTGTTGTGATCCTGCTAGCTGGTGCGAGGTTTTTGATA
CCGCCAACCTCTTTGCTGACTCCGATTCCCTTTTTGTTCGTGTCTATGTG
TGCTCCGCCTCTCTCGAAGAGCTCCAGGAGTGGCAAGGCTACGTCAGCTC
TCGTATTGTGCGAGCTCTGGAAGACTTGGCCGATGCCGGCCATTGGGCAA
GGCCTGTCTGCTATCAGTGGGCAAGAGTGGAGCCTGGTTCTCCATTTGGA
TGCGAGTTCTACCTCCTCATCAGGAAGACCAGCGGGGGTGAGACGGCAGC
TTACAAGGAGACTGTGCCTATCATCCAGAGTGCCTTCGAGGGCTGGTCTA
GGCGTACACCTACATCAGCCGTTCAAGTGGAAGTTTTGCCGCGT
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