mRNA_M-pyrifera_M_contig75557.17822.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig75557.17822.1 vs. uniprot
Match: A0A0S8E1U3_9BACT (GEVED domain-containing protein n=1 Tax=Phycisphaerae bacterium SG8_4 TaxID=1703409 RepID=A0A0S8E1U3_9BACT) HSP 1 Score: 57.4 bits (137), Expect = 1.500e-7 Identity = 36/95 (37.89%), Postives = 51/95 (53.68%), Query Frame = 1 Query: 22 GTRRFVFSPNY--------SDRVKVDVCTTNFDTVLAVVDSCNSL----GCIASNDDGCNYDASYVVVNVVAGRDYLICVGGWSTSTGNFRLNIA 270 G ++SPN + R + +C + FDT+LAV D C IA NDD C+ S V ++VVAGR YLI VGG+ + TG L+++ Sbjct: 212 GQGHCMYSPNIWYCYTAACTGRATISLCGSGFDTMLAVYDGCQCNPGQDDMIACNDDACDRQ-SEVTIDVVAGRQYLIEVGGYGSDTGQGVLSVS 305
BLAST of mRNA_M-pyrifera_M_contig75557.17822.1 vs. uniprot
Match: A0A532UNE4_9BACT (GEVED domain-containing protein n=1 Tax=Planctomycetes bacterium B3_Pla TaxID=2012488 RepID=A0A532UNE4_9BACT) HSP 1 Score: 56.2 bits (134), Expect = 3.820e-7 Identity = 34/97 (35.05%), Postives = 53/97 (54.64%), Query Frame = 1 Query: 13 TSSGTRRFVFSPNY--------SDRVKVDVCTTNFDTVLAVVDSC----NSLGCIASNDDGCNYDASYVVVNVVAGRDYLICVGGWSTSTGNFRLNI 267 T G+ + SPN + + +C ++FDT+LAV + C IA NDD C++ S + ++VVAG DYLI +GG+++ TG L+I Sbjct: 184 TFDGSGHCMSSPNIWYCYTAPCTGEATISLCGSSFDTILAVYEGCVCYPKQDDLIACNDDACDFQ-SELTIDVVAGEDYLIEIGGYASETGKGVLSI 279
BLAST of mRNA_M-pyrifera_M_contig75557.17822.1 vs. uniprot
Match: A0A532UQG8_9BACT (GEVED domain-containing protein n=1 Tax=Planctomycetes bacterium B3_Pla TaxID=2012488 RepID=A0A532UQG8_9BACT) HSP 1 Score: 53.9 bits (128), Expect = 2.520e-6 Identity = 33/96 (34.38%), Postives = 51/96 (53.12%), Query Frame = 1 Query: 4 GLYTSSGTRRFVFSPNYSDRVKVDVCTTNFDTVLAVVDSCNSLGCIASNDD--GCNYDASY-----VVVNVVAGRDYLICVGGWSTSTGNFRLNIA 270 GL +S + ++ + + + V + ++FDT+LAV D C GC + DD CN D+ Y + +AGR YLI +GG+ TG LNI+ Sbjct: 330 GLCMTSPNIWYCYTASCTGDITVSLAGSSFDTMLAVYDGC---GCYLTEDDLIECNDDSGYDTTSEITFTAIAGRRYLIEIGGYDIETGRGVLNIS 422
BLAST of mRNA_M-pyrifera_M_contig75557.17822.1 vs. uniprot
Match: A0A532UMA0_9BACT (GEVED domain-containing protein n=1 Tax=Planctomycetes bacterium B3_Pla TaxID=2012488 RepID=A0A532UMA0_9BACT) HSP 1 Score: 52.4 bits (124), Expect = 8.790e-6 Identity = 33/93 (35.48%), Postives = 49/93 (52.69%), Query Frame = 1 Query: 4 GLYTSSGTRRFVFSPNYSDRVKVDVCTTNFDTVLAVVDSC----NSLGCIASNDDGCNYDASYVVVNVVAGRDYLICVGGWSTSTGNFRLNIA 270 GL +S + ++ + V V + + +DT+LAV + C NS IA NDD S + +AGR YLI +GG+S+ TG LNI+ Sbjct: 58 GLCMTSPNLWYCYTAPCTGDVTVSLRGSGYDTMLAVYNGCQCYPNSADLIACNDDAPGSFQSEITFAAIAGRQYLIEIGGYSSETGRGILNIS 150
BLAST of mRNA_M-pyrifera_M_contig75557.17822.1 vs. uniprot
Match: UPI00198B8B0D (Uncharacterized protein n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=UPI00198B8B0D) HSP 1 Score: 51.6 bits (122), Expect = 1.580e-5 Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = 1 Query: 34 FVFSPNYSDRVKVDVCTTNFDTVLAV-VDSCNSL-----GCIASNDDGCNYDASYVVVNVVAGRDYLICVGGWSTSTGNFRL 261 F ++ + +DRV+V +C + FDTVLAV SC +L GC N C S V + +AG Y I VGG ++TG+ L Sbjct: 346 FTYTADCTDRVRVSLCDSTFDTVLAVYAGSCGALDLVAGGCNDDNGPACPGSRSSVEFDGLAGTSYTIRVGGVGSATGSGTL 427
BLAST of mRNA_M-pyrifera_M_contig75557.17822.1 vs. uniprot
Match: A0A1G3AMY5_9BACT (GEVED domain-containing protein n=1 Tax=Planctomycetes bacterium RBG_19FT_COMBO_48_8 TaxID=1801972 RepID=A0A1G3AMY5_9BACT) HSP 1 Score: 51.6 bits (122), Expect = 1.610e-5 Identity = 33/98 (33.67%), Postives = 49/98 (50.00%), Query Frame = 1 Query: 13 TSSGTRRFVFSPNY--------SDRVKVDVCTTNFDTVLAVVDSCNSL----GCIASNDDGCNYDASYVVVNVVAGRDYLICVGGWSTSTGNFRLNIA 270 T G + ++SPN + +V + ++FDT+LAV CN I NDD S +V+N VAG YLI VGG++ TG L+++ Sbjct: 38 TLDGPYKCMYSPNIWYCYTASCTGKVNISTVGSSFDTMLAVYQGCNCTTAWQNLIECNDDTNAAGQSKIVINAVAGSQYLIEVGGYALETGQGVLSVS 135
BLAST of mRNA_M-pyrifera_M_contig75557.17822.1 vs. uniprot
Match: A0A532UN08_9BACT (GEVED domain-containing protein n=1 Tax=Planctomycetes bacterium B3_Pla TaxID=2012488 RepID=A0A532UN08_9BACT) HSP 1 Score: 50.8 bits (120), Expect = 3.030e-5 Identity = 34/93 (36.56%), Postives = 50/93 (53.76%), Query Frame = 1 Query: 4 GLYTSSGTRRFVFSPNYSDRVKVDVCTTNFDTVLAVVDSCN----SLGCIASNDDGCNYDASYVVVNVVAGRDYLICVGGWSTSTGNFRLNIA 270 GL +S + ++ + + V V + + +DT+LAV + C S IA NDD N S V +AGR YLI VGG+S+ TG L+I+ Sbjct: 208 GLCMTSPNIWYCYTASCTGDVTVSLLGSGYDTMLAVYNGCGCFPTSADMIACNDDFGNGFQSQVTFAAIAGRRYLIEVGGYSSETGQGVLSIS 300
BLAST of mRNA_M-pyrifera_M_contig75557.17822.1 vs. uniprot
Match: A0A1G2YTG1_9BACT (GEVED domain-containing protein n=1 Tax=Planctomycetes bacterium RBG_13_50_24 TaxID=1801962 RepID=A0A1G2YTG1_9BACT) HSP 1 Score: 50.8 bits (120), Expect = 3.100e-5 Identity = 29/83 (34.94%), Postives = 45/83 (54.22%), Query Frame = 1 Query: 34 FVFSPNYSDRVKVDVCTTNFDTVLAVVDSCN----SLGCIASNDDGCNYDASYVVVNVVAGRDYLICVGGWSTSTGNFRLNIA 270 + ++ + + V + +++DT+LAV D C S I NDD N S +V + VAG YLI VGG+S+ TG L ++ Sbjct: 361 YCYTASCTGEATVSLAGSSYDTMLAVYDGCECYPTSSDMIECNDDAGNSYQSEIVFDAVAGNQYLIEVGGYSSETGQGLLTVS 443
BLAST of mRNA_M-pyrifera_M_contig75557.17822.1 vs. uniprot
Match: A0A1G2YXI8_9BACT (GEVED domain-containing protein n=1 Tax=Planctomycetes bacterium RBG_13_50_24 TaxID=1801962 RepID=A0A1G2YXI8_9BACT) HSP 1 Score: 50.4 bits (119), Expect = 4.230e-5 Identity = 32/92 (34.78%), Postives = 46/92 (50.00%), Query Frame = 1 Query: 4 GLYTSSGTRRFVFSPNYSDRVKVDVCTTNFDTVLAVVDSCN----SLGCIASNDDGCNYDASYVVVNVVAGRDYLICVGGWSTSTGNFRLNI 267 GL +S + ++ + + V + +NFDT+LAV D C S I NDD S V N +AG+ YLI VGG+ T G ++I Sbjct: 452 GLCMTSPNIWYCYTATCTGQATVSLAGSNFDTMLAVYDGCECDPTSNDLIECNDDAGGDYQSAVTFNAIAGKQYLIEVGGYGTEKGAGLISI 543 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75557.17822.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig75557.17822.1 >prot_M-pyrifera_M_contig75557.17822.1 ID=prot_M-pyrifera_M_contig75557.17822.1|Name=mRNA_M-pyrifera_M_contig75557.17822.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=93bp CGLYTSSGTRRFVFSPNYSDRVKVDVCTTNFDTVLAVVDSCNSLGCIASNback to top mRNA from alignment at M-pyrifera_M_contig75557:228..506+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig75557.17822.1 ID=mRNA_M-pyrifera_M_contig75557.17822.1|Name=mRNA_M-pyrifera_M_contig75557.17822.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=279bp|location=Sequence derived from alignment at M-pyrifera_M_contig75557:228..506+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig75557:228..506+ >mRNA_M-pyrifera_M_contig75557.17822.1 ID=mRNA_M-pyrifera_M_contig75557.17822.1|Name=mRNA_M-pyrifera_M_contig75557.17822.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=558bp|location=Sequence derived from alignment at M-pyrifera_M_contig75557:228..506+ (Macrocystis pyrifera P11B4 male)back to top |