mRNA_M-pyrifera_M_contig74847.17692.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig74847.17692.1 vs. uniprot
Match: A0A7R9WT19_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WT19_9STRA) HSP 1 Score: 205 bits (521), Expect = 1.640e-62 Identity = 111/219 (50.68%), Postives = 153/219 (69.86%), Query Frame = 1 Query: 1 LKRLMRRIQSLDRLEAKLRGRERTFAEKLEHTRALLAEGDLNDVERTHGENVLKHATAVLAVEDLQRYHDALDAALMRYHQIKIAEVNQSIRRLWDLTYKGGDIESIEIASNVDDGSSSAKRSTRSYNYRVMMTKSGHSLDMRGRCSAGQKVLASLVIRLALADSFTASSGILALDEPTTNLDSRNKESLARALALLVKERAAQ--LQLIVITHDGEFV 651 L +L +++Q L +A+L GR E + + L + + +VE + +++KH T ++AV D+++YH ALD AL+++H IKIAE+NQ IR LW LTYKG DI +IE+ S D G+ R++RSYNYRV+MTK +DMRGRCSAGQ+VLAS+VIRLALA++F + G +ALDEPT NLD NK LA ALA + +R+AQ QLI+ITHD +FV Sbjct: 25 LGKLDKKMQKLSASQARLEGRRSEIVESIRSLKRKLKQPEYKNVEEEYRVSMIKHETTLMAVRDIEKYHSALDHALLQFHSIKIAEINQIIRDLWRLTYKGEDITTIELVSGQDSGA----RASRSYNYRVVMTKGSTRMDMRGRCSAGQRVLASIVIRLALAETFCVNCGCIALDEPTVNLDFNNKRGLAIALAQITADRSAQSNFQLIMITHDEDFV 239
BLAST of mRNA_M-pyrifera_M_contig74847.17692.1 vs. uniprot
Match: A0A7S2EEH2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EEH2_TRICV) HSP 1 Score: 201 bits (511), Expect = 8.250e-62 Identity = 105/180 (58.33%), Postives = 135/180 (75.00%), Query Frame = 1 Query: 118 DLNDVERTHGENVLKHATAVLAVEDLQRYHDALDAALMRYHQIKIAEVNQSIRRLWDLTYKGGDIESIEIASNVDDGSSSAKRSTRSYNYRVMMTKSGHSLDMRGRCSAGQKVLASLVIRLALADSFTASSGILALDEPTTNLDSRNKESLARALALLVKERAAQ--LQLIVITHDGEFV 651 + ND++ H + +++ T +AV DL++YH ALD AL+RYH +KIA++N+ IR LW LTYKG DI +IE+ASN D GS R+ RSYNYRV+MTK LDMRGRCSAGQ+VLAS+VI+LALA++F + G++ LDEPTTNLD NK LA ALA ++ RAAQ QL+VITHD EFV Sbjct: 4 EYNDIDERHRQKMIEFETTNIAVADLEKYHSALDKALLRYHGMKIADINKIIRELWTLTYKGEDITNIELASNQDAGS----RAARSYNYRVVMTKGSTPLDMRGRCSAGQRVLASIVIKLALAETFCLNCGVMCLDEPTTNLDYANKRGLAIALAQIIATRAAQANFQLVVITHDEEFV 179
BLAST of mRNA_M-pyrifera_M_contig74847.17692.1 vs. uniprot
Match: A0A7R9W3X1_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W3X1_9STRA) HSP 1 Score: 206 bits (523), Expect = 3.770e-60 Identity = 110/213 (51.64%), Postives = 148/213 (69.48%), Query Frame = 1 Query: 19 RIQSLDRLEAKLRGRERTFAEKLEHTRALLAEGDLNDVERTHGENVLKHATAVLAVEDLQRYHDALDAALMRYHQIKIAEVNQSIRRLWDLTYKGGDIESIEIASNVDDGSSSAKRSTRSYNYRVMMTKSGHSLDMRGRCSAGQKVLASLVIRLALADSFTASSGILALDEPTTNLDSRNKESLARALALLVKERAAQ--LQLIVITHDGEFV 651 RIQ + +A+ GR E++ + L + D++ H ++++ T +AVEDL++YH ALD AL+RYH +KIA++N+ IR LW LTYKG DI +I++ S + GS R+ RSYNYRV+MTK G LDMRGRCSAGQ+VLAS+VIRLALA++F + G++ LDEPTTNLD NK LA ALA ++ RA+Q QL+VITHD EFV Sbjct: 273 RIQKQENTKAQCEGRRAEKKEQIRSLKRKLKTEEYKDIDERHRRKMIEYETTTIAVEDLEKYHSALDKALLRYHGMKIADINKIIRELWTLTYKGEDIANIKLESGQEKGS----RAARSYNYRVVMTKGGAELDMRGRCSAGQRVLASIVIRLALAETFCLNCGVMCLDEPTTNLDYANKRGLAVALAQIIANRASQTNFQLVVITHDEEFV 481
BLAST of mRNA_M-pyrifera_M_contig74847.17692.1 vs. uniprot
Match: A0A835YS51_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS51_9STRA) HSP 1 Score: 191 bits (486), Expect = 1.500e-57 Identity = 110/204 (53.92%), Postives = 142/204 (69.61%), Query Frame = 1 Query: 46 AKLRGRERTFAEKLEHTRALLAEGDLNDVERTHGENVLKHATAVLAVEDLQRYHDALDAALMRYHQIKIAEVNQSIRRLWDLTYKGGDIESIEIASNVDDGSSSAKRSTRSYNYRVMMTKSGHSLDMRGRCSAGQKVLASLVIRLALADSFTASSGILALDEPTTNLDSRNKESLARALALLVKERAAQ--LQLIVITHDGEFV 651 A+L GR ++ + L G V+ + ++ T +AV DL++Y ALD ALMRYH +KIAE+N+ IR LW +TYKGGDI+ IEI S +DG+S+ R+ RSYNYRV M K LDM+GRCSAGQ+VLAS+VIRLALA++F + GILALDEPTTNLD NK+ LA+ALA ++ +R+ Q QLIVITHD EFV Sbjct: 16 AELGGRLTALRDQGRDLKQRLKGGSYAGVQEKRRKKLIDVETTAMAVADLEKYWTALDKALMRYHHMKIAEINKIIRELWQITYKGGDIDMIEIVSG-EDGASN--RAGRSYNYRVAMRKGSTILDMKGRCSAGQRVLASIVIRLALAETFCINCGILALDEPTTNLDFENKDGLAKALARIIAQRSQQSNFQLIVITHDEEFV 216
BLAST of mRNA_M-pyrifera_M_contig74847.17692.1 vs. uniprot
Match: A0A7S2RPE9_9STRA (Hypothetical protein n=2 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RPE9_9STRA) HSP 1 Score: 189 bits (479), Expect = 1.650e-56 Identity = 101/202 (50.00%), Postives = 141/202 (69.80%), Query Frame = 1 Query: 52 LRGRERTFAEKLEHTRALLAEGDLNDVERTHGENVLKHATAVLAVEDLQRYHDALDAALMRYHQIKIAEVNQSIRRLWDLTYKGGDIESIEIASNVDDGSSSAKRSTRSYNYRVMMTKSGHSLDMRGRCSAGQKVLASLVIRLALADSFTASSGILALDEPTTNLDSRNKESLARALALLVKERAAQ--LQLIVITHDGEFV 651 +RG++R KL+ + + ++ H ++++ T V++V DL +YH ALD AL+RYH IKI E+N+ IR +W LTYKG DI +IEI S G +A+++++SYNYRV+M+K LDMRGRCSAGQ+VLAS+VIRLALA++F + G + LDEPTTNLD NK LA ALA ++ R+AQ QL++ITHD +FV Sbjct: 24 IRGQQRDLKRKLQTP-------EYDQIDERHRIKMIEYETTVISVADLDKYHSALDKALLRYHGIKIEEINKIIREVWTLTYKGEDISNIEIVS----GEENARKTSKSYNYRVVMSKGNTELDMRGRCSAGQRVLASIVIRLALAETFCLNCGFMTLDEPTTNLDFANKRGLAIALAQIIATRSAQQNFQLVIITHDEDFV 214
BLAST of mRNA_M-pyrifera_M_contig74847.17692.1 vs. uniprot
Match: A7RWC8_NEMVE (Predicted protein (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RWC8_NEMVE) HSP 1 Score: 187 bits (474), Expect = 2.890e-56 Identity = 104/200 (52.00%), Postives = 139/200 (69.50%), Query Frame = 1 Query: 58 GRERTFAEKLEHTRALLAEGDLNDVERTHGENVLKHATAVLAVEDLQRYHDALDAALMRYHQIKIAEVNQSIRRLWDLTYKGGDIESIEIASNVDDGSSSAKRSTRSYNYRVMMTKSGHSLDMRGRCSAGQKVLASLVIRLALADSFTASSGILALDEPTTNLDSRNKESLARALALLVKERAAQ--LQLIVITHDGEFV 651 GR++ F E++ + L + E H + V+ T +A DL++Y+ AL+ A+M+YH IK+AE+N+ I+ W TYKG DI++IEI S +DGS ++K + R+YNYRV+M K +LDMRGRCSAGQKVLASL+IRLALA++F + GIL LDEPTTNLD N ESLA LA +++ R AQ QLIVITHD FV Sbjct: 1 GRQKGFEEEIRRFQKDLRSEMYGNAEEKHRQKVIDMKTTKMASGDLEKYYKALNRAIMKYHSIKMAEINKIIKEYWINTYKGNDIDTIEIRSEDEDGSGASK-ARRTYNYRVVMIKGDLALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILTLDEPTTNLDEENIESLANQLANVIRTRQAQRNFQLIVITHDENFV 199
BLAST of mRNA_M-pyrifera_M_contig74847.17692.1 vs. uniprot
Match: A0A813ALA7_9DINO (RAD50 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813ALA7_9DINO) HSP 1 Score: 185 bits (469), Expect = 9.420e-56 Identity = 102/181 (56.35%), Postives = 129/181 (71.27%), Query Frame = 1 Query: 115 GDLNDVERTHGENVLKHATAVLAVEDLQRYHDALDAALMRYHQIKIAEVNQSIRRLWDLTYKGGDIESIEIASNVDDGSSSAKRSTRSYNYRVMMTKSGHSLDMRGRCSAGQKVLASLVIRLALADSFTASSGILALDEPTTNLDSRNKESLARALALLVKERAAQ--LQLIVITHDGEFV 651 G+ ++ + + +++ T L VEDL +Y AL+ ALM YHQ+KI E+N+ IR LW TY+G DI+ IE+ S+V+D +AKR RSYNYRV+MTK LDMRGRCSAGQKVLASLVIRLALA+SF GI+ LDEPTTNLD NK+ LA A+A L+ R Q QL++ITHD EFV Sbjct: 23 GNAAQIDERYRKKMIETHTLKLVVEDLDQYSRALEKALMEYHQLKITEINRIIRELWQATYRGQDIDMIELVSDVED-EGAAKR--RSYNYRVVMTKGPTKLDMRGRCSAGQKVLASLVIRLALAESFCVHCGIITLDEPTTNLDVGNKKGLAEAIAELITARREQTNFQLVIITHDDEFV 200
BLAST of mRNA_M-pyrifera_M_contig74847.17692.1 vs. uniprot
Match: A0A6G1R6R5_9GRUI (RAD50 double strand break repair protein n=1 Tax=Hypotaenidia okinawae TaxID=2861861 RepID=A0A6G1R6R5_9GRUI) HSP 1 Score: 188 bits (477), Expect = 1.560e-55 Identity = 114/219 (52.05%), Postives = 145/219 (66.21%), Query Frame = 1 Query: 4 KRLMRRIQSLDRLEAKLRGRERTFAEKLEHTRALLAEGDLNDVERTHGENVLKHATAVLAVEDLQRYHDALDAALMRYHQIKIAEVNQSIRRLWDLTYKGGDIESIEIASNVDDG-SSSAKRSTRSYNYRVMMTKSGHSLDMRGRCSAGQKVLASLVIRLALADSFTASSGILALDEPTTNLDSRNKESLARALALLVKERAAQ--LQLIVITHDGEFV 651 K L I+SL R GR+R F E++ + L E D E + E ++ T L +DL Y+ ALD A+M +H +K+ E+N+ IR LW TY+G DIE IEI S+ D+ S+S KR RSYNYRV+M K +LDMRGRCSAGQKVLASL+IRLALA++F + GILALDEPTTNLD N ESLA AL ++K R+ Q QL+VITHD +FV Sbjct: 58 KHLEETIESLKRNHHVALGRQRGFEEEIVRFKKELRESQFRDAEDKYREMMIVMRTTELVNKDLDLYYKALDKAIMTFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKR--RSYNYRVVMIKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFV 274
BLAST of mRNA_M-pyrifera_M_contig74847.17692.1 vs. uniprot
Match: D7FQL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQL8_ECTSI) HSP 1 Score: 191 bits (485), Expect = 3.010e-55 Identity = 107/204 (52.45%), Postives = 138/204 (67.65%), Query Frame = 1 Query: 46 AKLRGRERTFAEKLEHTRALLAEGDLNDVERTHGENVLKHATAVLAVEDLQRYHDALDAALMRYHQIKIAEVNQSIRRLWDLTYKGGDIESIEIASNVDDGSSSAKRSTRSYNYRVMMTKSGHSLDMRGRCSAGQKVLASLVIRLALADSFTASSGILALDEPTTNLDSRNKESLARALALLVKERAAQ--LQLIVITHDGEFV 651 A+L+GR ++ A L ++E H +++H T +AV DL +Y ALD AL+R+H +KIA++N+ IR LW +TY G DI+ IEI S D+ S AKRS YNYRV+M K+ +LDM+GRCSAGQ+VLAS+VIRLALA++F S GILALDEPTTNLD NK LA ALA ++ R+ Q QLI ITHD EFV Sbjct: 204 AELKGRLHGLKGQIRGYEAKLNSDTYRNIEEKHRRKMIEHRTTEMAVTDLDKYWTALDKALLRFHTMKIADINKIIRELWAMTYSGEDIDMIEIVSGDDEDSGKAKRS---YNYRVVMRKNDATLDMKGRCSAGQRVLASVVIRLALAETFCVSCGILALDEPTTNLDHNNKVGLAHALAKIISSRSKQANFQLITITHDEEFV 404
BLAST of mRNA_M-pyrifera_M_contig74847.17692.1 vs. uniprot
Match: A0A1S3LMQ4_SALSA (DNA repair protein RAD50-like n=1 Tax=Salmo salar TaxID=8030 RepID=A0A1S3LMQ4_SALSA) HSP 1 Score: 188 bits (477), Expect = 1.010e-54 Identity = 105/214 (49.07%), Postives = 142/214 (66.36%), Query Frame = 1 Query: 16 RRIQSLDRLEAKLRGRERTFAEKLEHTRALLAEGDLNDVERTHGENVLKHATAVLAVEDLQRYHDALDAALMRYHQIKIAEVNQSIRRLWDLTYKGGDIESIEIASNVDDGSSSAKRSTRSYNYRVMMTKSGHSLDMRGRCSAGQKVLASLVIRLALADSFTASSGILALDEPTTNLDSRNKESLARALALLVKERAAQ--LQLIVITHDGEFV 651 RR+ L + + GR++ F E++ R L E + + ++ T LA +DL Y+ ALD +M++H +K+ E+N+ IR LW TY+G DIE +EI S+VD+ SS A R+YNYRV+M K +LDMRGRCSAGQKVLASL+IRLALA++F + GILALDEPTTNLD N ESLA AL ++K R+ Q QL++ITHD +FV Sbjct: 132 RRVDDLKKNRSVALGRQKGFEEEIIRFRKELREDQYGKADERFRDRMIVMRTTELANKDLDIYYKALDQTIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYVEIRSDVDENSSGAGVKRRTYNYRVVMVKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQRNFQLLIITHDEDFV 345 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74847.17692.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig74847.17692.1 >prot_M-pyrifera_M_contig74847.17692.1 ID=prot_M-pyrifera_M_contig74847.17692.1|Name=mRNA_M-pyrifera_M_contig74847.17692.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=213bp MRRIQSLDRLEAKLRGRERTFAEKLEHTRALLAEGDLNDVERTHGENVLKback to top mRNA from alignment at M-pyrifera_M_contig74847:1..651- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig74847.17692.1 ID=mRNA_M-pyrifera_M_contig74847.17692.1|Name=mRNA_M-pyrifera_M_contig74847.17692.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=651bp|location=Sequence derived from alignment at M-pyrifera_M_contig74847:1..651- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig74847:1..651- >mRNA_M-pyrifera_M_contig74847.17692.1 ID=mRNA_M-pyrifera_M_contig74847.17692.1|Name=mRNA_M-pyrifera_M_contig74847.17692.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1278bp|location=Sequence derived from alignment at M-pyrifera_M_contig74847:1..651- (Macrocystis pyrifera P11B4 male)back to top |