mRNA_M-pyrifera_M_contig74571.17644.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig74571.17644.1 vs. uniprot
Match: A0A7C1WIH9_9BACT (Cobalamin-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C1WIH9_9BACT) HSP 1 Score: 161 bits (408), Expect = 1.180e-46 Identity = 74/110 (67.27%), Postives = 87/110 (79.09%), Query Frame = 1 Query: 1 RFAYLIWRKPYMTVNGDTFASALLEQAGGVNAFGDLAERYPAVEAADLAAAELDHVFLCTEPFPFQDKHIAELAEATGIPAERIRIADGEYLSWHGSRTPDGVDYAESLL 330 R+AYLIWRKP+M+VN DTF ALL QAGG+N F D RYP + A+LAAA D VFLCTEPF F+D+HI EL+E TG+ ER RI DGEYLSWHGSRTPDG+DYA +L+ Sbjct: 210 RWAYLIWRKPWMSVNRDTFVDALLSQAGGINVFADRETRYPEITPAELAAARPDRVFLCTEPFLFKDEHIDELSELTGLSRERFRIVDGEYLSWHGSRTPDGIDYAAALI 319
BLAST of mRNA_M-pyrifera_M_contig74571.17644.1 vs. uniprot
Match: A0A521KGJ4_9BACT (Cobalamin-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521KGJ4_9BACT) HSP 1 Score: 155 bits (393), Expect = 4.580e-45 Identity = 73/110 (66.36%), Postives = 83/110 (75.45%), Query Frame = 1 Query: 1 RFAYLIWRKPYMTVNGDTFASALLEQAGGVNAFGDLAERYPAVEAADLAAAELDHVFLCTEPFPFQDKHIAELAEATGIPAERIRIADGEYLSWHGSRTPDGVDYAESLL 330 RFAYLIWRKP+M+ N DTFAS LL QAGG N F D +ERYP +LA A + V LCTEPFPFQDKH EL+E TG+ R IADGEYLSWHGSRTPDG+DYAE ++ Sbjct: 137 RFAYLIWRKPWMSCNRDTFASELLAQAGGENVFADASERYPEFTPDELARARPELVLLCTEPFPFQDKHADELSELTGLARARFAIADGEYLSWHGSRTPDGIDYAERMI 246
BLAST of mRNA_M-pyrifera_M_contig74571.17644.1 vs. uniprot
Match: A0A2D5AYZ2_9BACT (Cobalamin-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5AYZ2_9BACT) HSP 1 Score: 154 bits (389), Expect = 1.330e-44 Identity = 73/109 (66.97%), Postives = 84/109 (77.06%), Query Frame = 1 Query: 4 FAYLIWRKPYMTVNGDTFASALLEQAGGVNAFGDLAERYPAVEAADLAAAELDHVFLCTEPFPFQDKHIAELAEATGIPAERIRIADGEYLSWHGSRTPDGVDYAESLL 330 +AYLIWRKP M+VN DTF+ ALL AGG N FG A+RYP + ADL A+ V LCTEPFPFQ++HIAEL ATG P+ R RIADGEYLSWHGSRTPDG+DYA L+ Sbjct: 138 YAYLIWRKPLMSVNRDTFSDALLALAGGRNVFGAHADRYPEITIADLTGADPALVLLCTEPFPFQEEHIAELVAATGWPSIRFRIADGEYLSWHGSRTPDGIDYAADLI 246
BLAST of mRNA_M-pyrifera_M_contig74571.17644.1 vs. uniprot
Match: A0A2D6HKC9_9BACT (Cobalamin-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HKC9_9BACT) HSP 1 Score: 152 bits (384), Expect = 7.740e-44 Identity = 71/110 (64.55%), Postives = 88/110 (80.00%), Query Frame = 1 Query: 1 RFAYLIWRKPYMTVNGDTFASALLEQAGGVNAFGDLAERYPAVEAADLAAAELDHVFLCTEPFPFQDKHIAELAEATGIPAERIRIADGEYLSWHGSRTPDGVDYAESLL 330 R+AY+IWR+P+MTVN DTF+ ALLE AGG N F + RYP VE ADLAAA+ + V LC+EPFPF+ +HIAEL+ TG+ AER +ADGEYLSWHGSRTP G+D+AE L+ Sbjct: 137 RWAYMIWREPWMTVNRDTFSHALLELAGGRNVFAEREPRYPTVEPADLAAADPELVLLCSEPFPFEREHIAELSGLTGLCAERFALADGEYLSWHGSRTPAGIDHAEELI 246
BLAST of mRNA_M-pyrifera_M_contig74571.17644.1 vs. uniprot
Match: A0A7Y5URM8_9PLAN (ABC transporter substrate-binding protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7Y5URM8_9PLAN) HSP 1 Score: 145 bits (365), Expect = 5.510e-41 Identity = 69/109 (63.30%), Postives = 80/109 (73.39%), Query Frame = 1 Query: 4 FAYLIWRKPYMTVNGDTFASALLEQAGGVNAFGDLAERYPAVEAADLAAAELDHVFLCTEPFPFQDKHIAELAEATGIPAERIRIADGEYLSWHGSRTPDGVDYAESLL 330 +AYLIWRKP+M+VN DTF ALL AGG N FG +RYP + +LA A VFLCTEPF F+ +H EL+ ATG+ ER IADGEYLSWHGSRTPDG+DYAE LL Sbjct: 138 WAYLIWRKPWMSVNRDTFVDALLALAGGRNVFGAREQRYPEITLEELAKAAPQRVFLCTEPFSFKPEHADELSAATGLQRERFVIADGEYLSWHGSRTPDGIDYAEGLL 246
BLAST of mRNA_M-pyrifera_M_contig74571.17644.1 vs. uniprot
Match: A0A7C8D0I8_9BACT (Cobalamin-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C8D0I8_9BACT) HSP 1 Score: 144 bits (363), Expect = 1.290e-40 Identity = 69/110 (62.73%), Postives = 80/110 (72.73%), Query Frame = 1 Query: 1 RFAYLIWRKPYMTVNGDTFASALLEQAGGVNAFGDLAERYPAVEAADLAAAELDHVFLCTEPFPFQDKHIAELAEATGIPAERIRIADGEYLSWHGSRTPDGVDYAESLL 330 RFAYLIWR P+M+VN DTFASALL AGGVN F +RYP +E + LAAA D V L TEPF F H+ E+A A G+ A R+ + DGEYLSWHGSRTPDGVDYA L+ Sbjct: 138 RFAYLIWRGPWMSVNADTFASALLCDAGGVNVFSGEPQRYPVIELSALAAARPDTVLLSTEPFLFNATHVVEVAAALGLDARRVAVVDGEYLSWHGSRTPDGVDYAAGLV 247
BLAST of mRNA_M-pyrifera_M_contig74571.17644.1 vs. uniprot
Match: W0RI21_9BACT (ABC-type transporter, periplasmic subunit n=1 Tax=Gemmatirosa kalamazoonesis TaxID=861299 RepID=W0RI21_9BACT) HSP 1 Score: 143 bits (361), Expect = 2.090e-40 Identity = 67/110 (60.91%), Postives = 80/110 (72.73%), Query Frame = 1 Query: 1 RFAYLIWRKPYMTVNGDTFASALLEQAGGVNAFGDLAERYPAVEAADLAAAELDHVFLCTEPFPFQDKHIAELAEATGIPAERIRIADGEYLSWHGSRTPDGVDYAESLL 330 R+AYLIWR P+MTV GDTF SALL+ AGG N F RYP +E A+LAAA+ V L +EPFPF D+H+ ELA AT +P +R R+ DGE LSWHGSRT G+DYA LL Sbjct: 137 RWAYLIWRNPWMTVGGDTFVSALLDAAGGENVFATRTPRYPEIEPAELAAADPALVLLASEPFPFDDRHVDELAAATALPRDRFRLVDGELLSWHGSRTARGIDYAAELL 246
BLAST of mRNA_M-pyrifera_M_contig74571.17644.1 vs. uniprot
Match: A0A524IY57_9BACT (Cobalamin-binding protein n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A524IY57_9BACT) HSP 1 Score: 143 bits (360), Expect = 1.180e-39 Identity = 68/117 (58.12%), Postives = 87/117 (74.36%), Query Frame = 1 Query: 4 FAYLIWRKPYMTVNGDTFASALLEQAGGVNAFGDLAERYPAVEAADLAAAELDHVFLCTEPFPFQDKHIAELAEATGIPAERIRIADGEYLSWHGSRTPDGVDYAESLL-WEGAAAG 351 FAYLIWR P+MTVN DTF S+LLE GG N FGD+++RYP ++AA LAAA+ D V L +EPFPF +H EL +TG+ +R + DGE LSWHGSRTP G+DYAE ++ G+A+G Sbjct: 187 FAYLIWRDPWMTVNADTFVSSLLELPGGHNVFGDMSDRYPTIDAARLAAADPDLVLLSSEPFPFIQQHARELERSTGLSPDRFILVDGELLSWHGSRTPAGIDYAEGVIRGAGSASG 303
BLAST of mRNA_M-pyrifera_M_contig74571.17644.1 vs. uniprot
Match: A0A7V4IXQ4_9BACT (Cobalamin-binding protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V4IXQ4_9BACT) HSP 1 Score: 141 bits (355), Expect = 4.290e-39 Identity = 64/110 (58.18%), Postives = 80/110 (72.73%), Query Frame = 1 Query: 1 RFAYLIWRKPYMTVNGDTFASALLEQAGGVNAFGDLAERYPAVEAADLAAAELDHVFLCTEPFPFQDKHIAELAEATGIPAERIRIADGEYLSWHGSRTPDGVDYAESLL 330 R+AYLIWR P+M V GDT+ SALL +AGG N FG AERYP V DL ++E + VFL +EPFPF ++H+ EL +ATG P R + DG+ LSWHGSRT +G+ YAE LL Sbjct: 171 RYAYLIWRNPWMAVGGDTYVSALLAEAGGSNVFGGYAERYPTVSVDDLVSSEPEAVFLASEPFPFAERHVVELMQATGWPRSRFELVDGQLLSWHGSRTLEGLRYAERLL 280
BLAST of mRNA_M-pyrifera_M_contig74571.17644.1 vs. uniprot
Match: A0A2D5W944_9BACT (Cobalamin-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5W944_9BACT) HSP 1 Score: 139 bits (350), Expect = 1.540e-38 Identity = 66/110 (60.00%), Postives = 77/110 (70.00%), Query Frame = 1 Query: 1 RFAYLIWRKPYMTVNGDTFASALLEQAGGVNAFGDLAERYPAVEAADLAAAELDHVFLCTEPFPFQDKHIAELAEATGIPAERIRIADGEYLSWHGSRTPDGVDYAESLL 330 RFAYLIWR+P+M V DT+AS L+ AGG N ERY VE A LAAA D V LCTEPFPF + H AELA+ TG+P +ADGE++SWHGSRTP G+DYA LL Sbjct: 152 RFAYLIWRQPWMAVGADTYASDLIGLAGGENVLAGSIERYGEVEPATLAAARPDLVLLCTEPFPFDETHAAELADLTGLPRASFSVADGEFISWHGSRTPAGIDYAADLL 261 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74571.17644.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig74571.17644.1 >prot_M-pyrifera_M_contig74571.17644.1 ID=prot_M-pyrifera_M_contig74571.17644.1|Name=mRNA_M-pyrifera_M_contig74571.17644.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=119bp RFAYLIWRKPYMTVNGDTFASALLEQAGGVNAFGDLAERYPAVEAADLAAback to top mRNA from alignment at M-pyrifera_M_contig74571:18..374+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig74571.17644.1 ID=mRNA_M-pyrifera_M_contig74571.17644.1|Name=mRNA_M-pyrifera_M_contig74571.17644.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=357bp|location=Sequence derived from alignment at M-pyrifera_M_contig74571:18..374+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig74571:18..374+ >mRNA_M-pyrifera_M_contig74571.17644.1 ID=mRNA_M-pyrifera_M_contig74571.17644.1|Name=mRNA_M-pyrifera_M_contig74571.17644.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=714bp|location=Sequence derived from alignment at M-pyrifera_M_contig74571:18..374+ (Macrocystis pyrifera P11B4 male)back to top |