mRNA_M-pyrifera_M_contig74332.17606.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig74332.17606.1 vs. uniprot
Match: A0A5A8DUA7_CAFRO (COP9 signalosome complex subunit 4 n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DUA7_CAFRO) HSP 1 Score: 172 bits (436), Expect = 2.050e-47 Identity = 110/295 (37.29%), Postives = 163/295 (55.25%), Query Frame = 1 Query: 7 VDWALRKLLFDIAVGDGNHSEAASVFVNALRVPLEERTFTLVRIAQCFLAAGDSGNADVYVRRAAESVEDDTPLPTLVMLR--VCRARVQDARRNFESAAQLYVELSRVEGLDTDPMELLSLLEDAAVCAVLARPSPQRQRLLTAIARDSRAPSLQSFRIVDAAQKGRFLTEAHVRSFRPLLKEHHPPAV------LERALHEHNILAASRIYRNVALPDLAALVGVEEDRCEAMAAAMIASGALQGASIDQVAGTVAFGADT-DPVAAWDKGLDILVRTVAKTAEEIAQKHPKL 864 D+ LR+ LFD+ + + AA+V + VP+ +R T IAQ FL A ++G A++ +R+ AE + D+ + LR CRA+V D +RN++ AA Y LS++EG D EL L+ AAVCA+L R PQRQR+L I RD RA L SF +++ + + + + FR L+ HH +V +RA+ EHN+LAAS ++ ++ L L+ V+ E AA M+ G LQ A+IDQV G + FG T D ++AWD L L + + I+ HP L Sbjct: 99 ADYTLRRALFDLYAANEDFEPAATVLSKCVSVPVAQRAATFAEIAQAFLMADNAGAAEMALRQVAELMADEDAVDKATQLRYRACRAQVADLQRNYKQAAATYSSLSQLEG-DVKQAELEVFLDRAAVCAILDRAGPQRQRILNKIYRDPRAADLPSFVMLEKMCRQQLVRKEEADEFRATLRPHHLASVGDGSTVFDRAVREHNVLAASLVFTAISFSSLGDLLEVDAAAAEKYAARMVEEGRLQ-ATIDQVQGVLEFGTGTADELSAWDTSLADLFGALTTAVDAISTAHPHL 391
BLAST of mRNA_M-pyrifera_M_contig74332.17606.1 vs. uniprot
Match: A0A812PX43_9DINO (COP9 signalosome complex subunit 4 n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812PX43_9DINO) HSP 1 Score: 172 bits (436), Expect = 4.870e-46 Identity = 110/295 (37.29%), Postives = 163/295 (55.25%), Query Frame = 1 Query: 7 VDWALRKLLFDIAVGDGNHSEAASVFVNALRVPLEERTFTLVRIAQCFLAAGDSGNADVYVRRAAESVEDDTPLPTLVMLR--VCRARVQDARRNFESAAQLYVELSRVEGLDTDPMELLSLLEDAAVCAVLARPSPQRQRLLTAIARDSRAPSLQSFRIVDAAQKGRFLTEAHVRSFRPLLKEHHPPAV------LERALHEHNILAASRIYRNVALPDLAALVGVEEDRCEAMAAAMIASGALQGASIDQVAGTVAFGADT-DPVAAWDKGLDILVRTVAKTAEEIAQKHPKL 864 D+ LR+ LFD+ + + AA+V + VP+ +R T IAQ FL A ++G A++ +R+ AE + D+ + LR CRA+V D +RN++ AA Y LS++EG D EL L+ AAVCA+L R PQRQR+L I RD RA L SF +++ + + + + FR L+ HH +V +RA+ EHN+LAAS ++ ++ L L+ V+ E AA M+ G LQ A+IDQV G + FG T D ++AWD L L + + I+ HP L Sbjct: 267 ADYTLRRALFDLYAANEDFEPAATVLSKCVSVPVAQRAATFAEIAQAFLMADNAGAAEMALRQVAELMADEDAVDKATQLRYRACRAQVADLQRNYKQAAATYSSLSQLEG-DVKQAELEVFLDRAAVCAILDRAGPQRQRILNKIYRDPRAADLPSFVMLEKMCRQQLVRKEEADEFRATLRPHHLASVGDGSTVFDRAVREHNVLAASLVFTAISFSSLGDLLEVDAAAAEKYAARMVEEGRLQ-ATIDQVQGVLEFGTGTADELSAWDTSLADLFGALTTAVDAISTAHPHL 559
BLAST of mRNA_M-pyrifera_M_contig74332.17606.1 vs. uniprot
Match: A0A7S1C7T8_9STRA (COP9 signalosome complex subunit 4 n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C7T8_9STRA) HSP 1 Score: 154 bits (388), Expect = 2.390e-40 Identity = 112/306 (36.60%), Postives = 166/306 (54.25%), Query Frame = 1 Query: 7 VDWALRKLLFDIAVGDGNHSEAASVF------VNALRVPL--EERTFTLVRIAQCFLAAGDSGNADVYVRRAAESVEDDTPLPTLVMLRVCRARVQDARRNFESAAQLYVELSRVEGLDTDPMELLSLLEDAAVCAVLARPSPQ-RQRLLTAIARDSRAPSLQSFRIVDAAQKGRFLT----EAHVRSFRPLLKEHHPP------AVLERALHEHNILAASRIYRNVALPDLAALVGVEEDRCEAMAAAMIASGALQGASIDQVAGTVAFGADTDPVAAWDKGLDILVRTVAKTAEEIAQKHPKLA 867 +D LR+LL ++ +G AA V NA +E+T V++A+ FL S A+ YV RA+ V + T T++ +VC+ARV DA+R F AA ++ +LS+ + D D + +L +A C +LA + R RL+ +I RD RA L F +++ + R L A VR F L EH VL+RA++EHN+LAASR+Y NVA +L L+GV+ E A+ MI G L+ A+IDQVAG +AF A + ++AWD+ + L V AE A+K+P +A Sbjct: 91 LDVHLRELLSEVLQNEGEFEAAARVLSVAATSANAGSASFSDQEKTELCVKVAELFLVEEMSAQAETYVNRASTFVFNATEPMTILRHKVCKARVLDAKREFYKAACIFYQLSQTQNDDIDHDSIAEMLSNACTCVILAGAGERGRHRLMGSIYRDPRAVELDHFEVLENMYRERLLRWEEGGALVR-FEAALAEHQKADVGGGLTVLQRAVNEHNMLAASRVYSNVAFAELGTLLGVDAASAEDTASKMIKEGRLE-ATIDQVAGVLAFAAGAEALSAWDEHIKHLCLEVNAVAEAAAKKYPAVA 394
BLAST of mRNA_M-pyrifera_M_contig74332.17606.1 vs. uniprot
Match: A0A1V8SYL2_9PEZI (COP9 signalosome complex subunit 4 n=3 Tax=Rachicladosporium TaxID=470018 RepID=A0A1V8SYL2_9PEZI) HSP 1 Score: 145 bits (365), Expect = 7.630e-37 Identity = 99/267 (37.08%), Postives = 141/267 (52.81%), Query Frame = 1 Query: 1 EDVDWALRKLLFDIAVGDGNHSEAASVFV------NALRVPLEERTFTLVRIAQCFLAAGDSGNADVYVRRAAESVEDDTPLPTLVMLRVCRARVQDARRNFESAAQLYVELSRVEGLDTDPMELLSLLEDAAVCAVLARPSPQRQRLLTAIARDSRAPSLQSFRIVDAAQKGRFLTEAHVRSFRPLLKEHH------PPAVLERALHEHNILAASRIYRNVALPDLAALVGVEEDRCEAMAAAMIASGALQGASIDQVAGTVAFGA 765 E D AL+ LL D D + +A V + V +E+ +RI +C+L GDS NA Y+ R + + + T T + + +AR+ D+ RNF A+ Y LS +D + E L L A AVLA PQR R L + +D RA + I++ R L+ A V++F LK+H VL++A+ EHN+LA SR+Y+N+ALP L AL+GV+ DR E AA M+ SG L G SIDQ+ G + FGA Sbjct: 103 EQQDTALKFLLADAYEADEDFGSSAKVLQVITLDSSQRAVSDDEKAKVWMRICRCYLEEGDSTNATTYLNRVKQVIFNVTDAETRLFFALSQARISDSMRNFLDASAAYYTLSNESSIDEE--ERLHTLRQAITTAVLAPAGPQRARQLGRLYKDERASETPEYSILEKIFLDRLLSPAEVKTFAAELKDHQLAKTADGSTVLDKAVLEHNLLAVSRLYQNIALPSLGALLGVDADRAEEYAAGMVESGRL-GGSIDQMEGVIHFGA 366
BLAST of mRNA_M-pyrifera_M_contig74332.17606.1 vs. uniprot
Match: A0A0G4FH25_9ALVE (COP9 signalosome complex subunit 4 n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FH25_9ALVE) HSP 1 Score: 143 bits (360), Expect = 2.750e-36 Identity = 105/300 (35.00%), Postives = 155/300 (51.67%), Query Frame = 1 Query: 1 EDVDWALRKLLFDIAVGDGNHSEAASVF--VNALRVP-LEERTFTLVRIAQCFLAAGDSGNADVYVRRAAESVEDDTPLPTLVMLRVCRARVQDARRNFESAAQLYVELS-RVEGLDTDPMELLSLLEDAAVCAVLARPSPQRQRLLTAIARDSRAPSLQSFRIVDAAQKGRFLTEAHVRSFRPLLKEHHPPA------VLERALHEHNILAASRIYRNVALPDLAALVGVEEDRCEAMAAAMIASGALQGASIDQVAGTVAFGA-DTDPVAAWDKGLDILVRTVAKTAEEIAQKHPKLA 867 E+ D R+ DI +G EAA +N R +++R L+ IA+CFL DS +A+ Y +A V + + RV AR+ D++R F AA Y ELS G++ D +L LL DAA C VLA PQR RLL ++ ++ R S+ +F +V R +T A +++F LKEH LERA+ +HN+LAASR+Y+N+ L AL+GVE + E +A MI ++G S+DQ AG + F + + +WD + + V A + AQ K A Sbjct: 95 EEEDMMFREKYSDILREEGRFIEAAKCLSAINIERAKTVDDRCDKLITIAECFLEEDDSVSAEAYCNKAGMIVHEVENKVIELRYRVTYARILDSKRQFLLAANKYFELSLNPFGMEIDTQDLFQLLCDAATCCVLAPAGPQRSRLLNSLMKEDRIRSVPAFEMVKKMYLQRIVTPADLQAFSSTLKEHQVATDKEGVTYLERAVLQHNVLAASRVYKNMRLESFGALLGVEPLKAEKIATKMIREARMEG-SVDQKAGIIHFAQMEGQELVSWDCQIQRVCEKVNALAADAAQLMGKAA 393
BLAST of mRNA_M-pyrifera_M_contig74332.17606.1 vs. uniprot
Match: A0A7S0A434_9DINO (COP9 signalosome complex subunit 4 n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0A434_9DINO) HSP 1 Score: 142 bits (359), Expect = 4.790e-36 Identity = 96/279 (34.41%), Postives = 149/279 (53.41%), Query Frame = 1 Query: 1 EDVDWALRKLLFDIAVGDGNHSEAASVFV-------NALRVPLEERTFTLVRIAQCFLAAGDSGNADVYVRRAAESVEDDTPLPTLVMLRVCRARVQDARRNFESAAQLYVELSRVE-GLDTDPMELLSLLEDAAVCAVLARPSPQRQRLLTAIARDSRAPSLQSFRIVDAAQKGRFLTEAHVRSFRPLLKEHHPPA------VLERALHEHNILAASRIYRNVALPDLAALVGVEEDRCEAMAAAMIASGALQGASIDQVAGTVAFGADTDPVAAWDK 795 E+ D+ +R+LL ++ +GN SEAA R PL++ V+IA+ +L D +AD + RAA + + +P + +VC AR+ D++R F AA Y +LS+ G +L+ LL+ A CA+LA PQR R+L + +D R S++ + I+ R + + V+ F L H VLERA+ +HN+LAASR+Y+N+ LPDL L+ V +R E +AA MIA L+G IDQ +G + F + + WD+ Sbjct: 104 EEEDFVIRELLSEVFQAEGNWSEAAKCLAAINLETGTRCRTPLQKAE-KYVKIAELYLEDDDPVSADTFSTRAAMVMHEVEDVPLQLRFKVCHARILDSKRKFLEAASKYCDLSQQTFGGQICEADLVQLLKCAVTCAILAPAGPQRSRILALLCKDERIRSVEHYEILHKMFMERLIRGSEVQKFAESLLPHQKAVMGDGQTVLERAVVQHNVLAASRVYKNMRLPDLGLLLEVSGERAEKIAAKMIAEQRLEG-YIDQRSGVIHFEGGDEDLQQWDR 380
BLAST of mRNA_M-pyrifera_M_contig74332.17606.1 vs. uniprot
Match: A0A250WRX9_9CHLO (COP9 signalosome complex subunit 4 n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WRX9_9CHLO) HSP 1 Score: 140 bits (352), Expect = 4.350e-35 Identity = 91/258 (35.27%), Postives = 140/258 (54.26%), Query Frame = 1 Query: 130 VRIAQCFLAAGDSGNADVYVRRAAESVEDDTPLPTLVMLRVCRARVQDARRNFESAAQLYVELS-----RVEGLDTDPMELLSLLEDAAVCAVLARPSPQRQRLLTAIARDSRAPSLQSFRIVDAAQKGRFLTEAHVRSFRPLLKEHHPP------AVLERALHEHNILAASRIYRNVALPDLAALVGVEEDRCEAMAAAMIASGALQGASIDQVAGTVAFGADTDPVAAWDKGLDILVRTVAKTAEEIAQKHPKLAA 870 ++IA +L D NA++Y+++AA + + +VC AR+ D++R F AA Y ELS + EGL DP EL+ L A C VLA QR R+L+ + +D R+P L + +++ R L+ V +F LK H VLERA+ +HNIL+AS++Y N++L +L AL+GV +R E+++ MI+ G LQ AS+DQV + F + + WD + L V + +E A KL+A Sbjct: 144 IKIAMLYLEDEDPVNAEMYIKKAASLIGTCKAADLELQYKVCYARILDSKRRFLEAALRYYELSLLSSQKAEGLTVDPEELIQSLGLAVTCTVLAPAGAQRSRMLSTLYKDERSPQLPVYPLLEKVYLERILSRQEVEAFAKTLKSHQMALLPDGTTVLERAVMQHNILSASKLYNNISLQELGALLGVASERAESISCDMISDGRLQ-ASVDQVENMIHFH-QGEVLLQWDAQIQSLCHKVNEIVDEAANAGIKLSA 399
BLAST of mRNA_M-pyrifera_M_contig74332.17606.1 vs. uniprot
Match: A0A7S4LMK2_9EUGL (COP9 signalosome complex subunit 4 n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LMK2_9EUGL) HSP 1 Score: 138 bits (347), Expect = 2.420e-34 Identity = 96/309 (31.07%), Postives = 152/309 (49.19%), Query Frame = 1 Query: 1 EDVDWALRKLLFDIAVGDGNHSEAASVFVNALRVPLEERTFTL---------VRIAQCFLAAGDSGNADVYVRRAAESVEDDTPLPTLVMLRVCRARVQDARRNFESAAQLYVELSRVEGLDTDPMELLSLLEDAAVCAVLARPSPQRQRLLTAIARDSRAPSLQS-FRIVDAAQKGRFLTEAHVRSFRPLLKEHHPP------AVLERALHEHNILAASRIYRNVALPDLAALVGVEEDRCEAMAAAMIASGALQGASIDQVAGTVAFGADTDPVAAWDKGLDILVRTVAKTAEEIAQKHPKLAADME 879 ++ A+R+ L D+ + N + A + +PL+ + L VRIAQ FL D A+ Y+ + V + + C AR+QD +R F AA Y ELS++ D EL L+ A VC +L+ P+R RLL + +D R L + +++ R L V R LK HH VLERA+ +HN+LAAS +Y N+ +L AL+G+ ++ E +A+ MIA +QG SIDQ+ + F + + WD+ + V++ +E+ +KHP+ AA +E Sbjct: 99 QEESTAIREKLADLYQEEENWKQCAMTLIG---IPLDSGSRALNEEYKLGHYVRIAQLFLEDDDHIQAETYINKCLPLVHSGIDPVLNLKYKACFARIQDCQRKFFEAATRYYELSQLVADDEQTAELA--LQSATVCTILSPAGPKRSRLLATLHKDERTNKLGPLYNVLEKMHMDRILRPEEVNQLREYLKPHHEAILADGQTVLERAVTQHNLLAASNLYYNITFGELGALLGISAEKAEQIASRMIAEERMQG-SIDQIESLIQFQNVSGVMTQWDEQISSACSFVSRICDEVIKKHPEYAAMLE 401
BLAST of mRNA_M-pyrifera_M_contig74332.17606.1 vs. uniprot
Match: A0A6H0XQM1_9PEZI (COP9 signalosome complex subunit 4 n=1 Tax=Peltaster fructicola TaxID=286661 RepID=A0A6H0XQM1_9PEZI) HSP 1 Score: 137 bits (344), Expect = 7.400e-34 Identity = 92/264 (34.85%), Postives = 137/264 (51.89%), Query Frame = 1 Query: 109 EERTFTLVRIAQCFLAAGDSGNADVYVRRAAESVEDDTPLPTLVMLRVCRARVQDARRNFESAAQLYVELSRVEGLDTDPMELLSLLEDAAVCAVLARPSPQRQRLLTAIARDSRAPSLQSFRIVDAAQKGRFLTEAHVRSFRPLLKEHH------PPAVLERALHEHNILAASRIYRNVALPDLAALVGVEEDRCEAMAAAMIASGALQGASIDQVAGTVAF-------GADTDPVAAWDKGLDILVRTVAKTAEEIAQKHPK 861 +++ T +RI +C+L D NA Y+ R + + + T T + ++ +AR+ D++R+F A+ Y LS +D + E L L A CAVLA P R R L + +D RA + I++ R LT A V +F LKEH VL++A+ EHN+LA SR+YRN+ +L L+GVE DR E AA MI S L G SIDQ+ + F GA + + AWD+ + L V K A + ++ P+ Sbjct: 141 DDKARTWIRIVRCYLEEDDPTNAVSYLNRIKQIIYNVTDQVTRLQFQLSQARISDSQRSFLDASAAYYTLSNETAIDEE--ERLHTLSAAITCAVLAPAGPLRARQLGTLYKDERALETPEYSILEKIYLDRLLTRAEVEAFAAGLKEHQLAKTSDGSTVLDKAVLEHNLLAVSRLYRNITFDNLGTLLGVEADRAETYAAGMIESNRLSG-SIDQIDSVIHFNIRDGDRGAASAKMRAWDENIQNLAEEVEKVATLLQREEPQ 401
BLAST of mRNA_M-pyrifera_M_contig74332.17606.1 vs. uniprot
Match: A0A2R5GAA6_9STRA (COP9 signalosome complex subunit 4 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GAA6_9STRA) HSP 1 Score: 136 bits (343), Expect = 1.140e-33 Identity = 102/306 (33.33%), Postives = 163/306 (53.27%), Query Frame = 1 Query: 1 EDVDWALRKLLFDIAVGDGNHSEAASVF----VNALRVPLEERTFTLVRIAQCFLAAGDSGNADVYVRRAAESVEDDTPLPTLVMLRVCRARVQDARRNFESAAQLYVELSR----VEGLDTDPMELLSLLEDAAVCAVLARPSPQRQRLLTAIARDSRAPSLQ-SFRIVDAAQKGRFLTEAHVRSFRPLLKEHHPP------AVLERALHEHNILAASRIYRNVALPDLAALVGVEEDRCEAMAAAMIASGALQGASIDQVAGTVAFGADTD-PVAAWDKGLDILVRTVAKTAEEIAQKHPKLAA 870 E+V+ +R+LL + + +AA V + R ++ VRI + FL A ++ A+ +V RA++ + PL V +V AR+ DA+R F AA Y +LS V+G +L+ LL + CA+LA PQRQR+L + +D R+ +L S+ +++ R LT A + F L+ H VLERA+ EHN+LAA++IY NV+ +LA L+ +E+ R E++A+ MI +QG +IDQV G + F A+ D P+ ++D + L V ++I + HP A Sbjct: 111 EEVEAKIRELLGAVLAEKELYVDAARVLSAINMEDARHSDAQKAEQYVRITELFLEADETVEAERFVNRASQYIYTCDPL-VQVRHKVSYARILDAKRRFLDAAHRYYKLSSESAMVDGKTVAEEDLMHLLSKSVTCAILASAGPQRQRMLNLLYKDERSRTLTTSWMVLEKMYMQRILTNAEIAVFEQQLEPHQKAILADGSTVLERAVLEHNVLAATKIYANVSFAELAKLLNIEQTRAESVASTMIKEKRMQG-TIDQVDGVLDFAAEEDDPLISFDARIQHLCHAVNGVLDQIEKTHPGFVA 414 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74332.17606.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig74332.17606.1 >prot_M-pyrifera_M_contig74332.17606.1 ID=prot_M-pyrifera_M_contig74332.17606.1|Name=mRNA_M-pyrifera_M_contig74332.17606.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=294bp EDVDWALRKLLFDIAVGDGNHSEAASVFVNALRVPLEERTFTLVRIAQCFback to top mRNA from alignment at M-pyrifera_M_contig74332:6..887+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig74332.17606.1 ID=mRNA_M-pyrifera_M_contig74332.17606.1|Name=mRNA_M-pyrifera_M_contig74332.17606.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=882bp|location=Sequence derived from alignment at M-pyrifera_M_contig74332:6..887+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig74332:6..887+ >mRNA_M-pyrifera_M_contig74332.17606.1 ID=mRNA_M-pyrifera_M_contig74332.17606.1|Name=mRNA_M-pyrifera_M_contig74332.17606.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1764bp|location=Sequence derived from alignment at M-pyrifera_M_contig74332:6..887+ (Macrocystis pyrifera P11B4 male)back to top |