mRNA_M-pyrifera_M_contig74332.17606.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig74332.17606.1
Unique NamemRNA_M-pyrifera_M_contig74332.17606.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig74332.17606.1 vs. uniprot
Match: A0A5A8DUA7_CAFRO (COP9 signalosome complex subunit 4 n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DUA7_CAFRO)

HSP 1 Score: 172 bits (436), Expect = 2.050e-47
Identity = 110/295 (37.29%), Postives = 163/295 (55.25%), Query Frame = 1
Query:    7 VDWALRKLLFDIAVGDGNHSEAASVFVNALRVPLEERTFTLVRIAQCFLAAGDSGNADVYVRRAAESVEDDTPLPTLVMLR--VCRARVQDARRNFESAAQLYVELSRVEGLDTDPMELLSLLEDAAVCAVLARPSPQRQRLLTAIARDSRAPSLQSFRIVDAAQKGRFLTEAHVRSFRPLLKEHHPPAV------LERALHEHNILAASRIYRNVALPDLAALVGVEEDRCEAMAAAMIASGALQGASIDQVAGTVAFGADT-DPVAAWDKGLDILVRTVAKTAEEIAQKHPKL 864
             D+ LR+ LFD+   + +   AA+V    + VP+ +R  T   IAQ FL A ++G A++ +R+ AE + D+  +     LR   CRA+V D +RN++ AA  Y  LS++EG D    EL   L+ AAVCA+L R  PQRQR+L  I RD RA  L SF +++   + + + +     FR  L+ HH  +V       +RA+ EHN+LAAS ++  ++   L  L+ V+    E  AA M+  G LQ A+IDQV G + FG  T D ++AWD  L  L   +    + I+  HP L
Sbjct:   99 ADYTLRRALFDLYAANEDFEPAATVLSKCVSVPVAQRAATFAEIAQAFLMADNAGAAEMALRQVAELMADEDAVDKATQLRYRACRAQVADLQRNYKQAAATYSSLSQLEG-DVKQAELEVFLDRAAVCAILDRAGPQRQRILNKIYRDPRAADLPSFVMLEKMCRQQLVRKEEADEFRATLRPHHLASVGDGSTVFDRAVREHNVLAASLVFTAISFSSLGDLLEVDAAAAEKYAARMVEEGRLQ-ATIDQVQGVLEFGTGTADELSAWDTSLADLFGALTTAVDAISTAHPHL 391          
BLAST of mRNA_M-pyrifera_M_contig74332.17606.1 vs. uniprot
Match: A0A812PX43_9DINO (COP9 signalosome complex subunit 4 n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812PX43_9DINO)

HSP 1 Score: 172 bits (436), Expect = 4.870e-46
Identity = 110/295 (37.29%), Postives = 163/295 (55.25%), Query Frame = 1
Query:    7 VDWALRKLLFDIAVGDGNHSEAASVFVNALRVPLEERTFTLVRIAQCFLAAGDSGNADVYVRRAAESVEDDTPLPTLVMLR--VCRARVQDARRNFESAAQLYVELSRVEGLDTDPMELLSLLEDAAVCAVLARPSPQRQRLLTAIARDSRAPSLQSFRIVDAAQKGRFLTEAHVRSFRPLLKEHHPPAV------LERALHEHNILAASRIYRNVALPDLAALVGVEEDRCEAMAAAMIASGALQGASIDQVAGTVAFGADT-DPVAAWDKGLDILVRTVAKTAEEIAQKHPKL 864
             D+ LR+ LFD+   + +   AA+V    + VP+ +R  T   IAQ FL A ++G A++ +R+ AE + D+  +     LR   CRA+V D +RN++ AA  Y  LS++EG D    EL   L+ AAVCA+L R  PQRQR+L  I RD RA  L SF +++   + + + +     FR  L+ HH  +V       +RA+ EHN+LAAS ++  ++   L  L+ V+    E  AA M+  G LQ A+IDQV G + FG  T D ++AWD  L  L   +    + I+  HP L
Sbjct:  267 ADYTLRRALFDLYAANEDFEPAATVLSKCVSVPVAQRAATFAEIAQAFLMADNAGAAEMALRQVAELMADEDAVDKATQLRYRACRAQVADLQRNYKQAAATYSSLSQLEG-DVKQAELEVFLDRAAVCAILDRAGPQRQRILNKIYRDPRAADLPSFVMLEKMCRQQLVRKEEADEFRATLRPHHLASVGDGSTVFDRAVREHNVLAASLVFTAISFSSLGDLLEVDAAAAEKYAARMVEEGRLQ-ATIDQVQGVLEFGTGTADELSAWDTSLADLFGALTTAVDAISTAHPHL 559          
BLAST of mRNA_M-pyrifera_M_contig74332.17606.1 vs. uniprot
Match: A0A7S1C7T8_9STRA (COP9 signalosome complex subunit 4 n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C7T8_9STRA)

HSP 1 Score: 154 bits (388), Expect = 2.390e-40
Identity = 112/306 (36.60%), Postives = 166/306 (54.25%), Query Frame = 1
Query:    7 VDWALRKLLFDIAVGDGNHSEAASVF------VNALRVPL--EERTFTLVRIAQCFLAAGDSGNADVYVRRAAESVEDDTPLPTLVMLRVCRARVQDARRNFESAAQLYVELSRVEGLDTDPMELLSLLEDAAVCAVLARPSPQ-RQRLLTAIARDSRAPSLQSFRIVDAAQKGRFLT----EAHVRSFRPLLKEHHPP------AVLERALHEHNILAASRIYRNVALPDLAALVGVEEDRCEAMAAAMIASGALQGASIDQVAGTVAFGADTDPVAAWDKGLDILVRTVAKTAEEIAQKHPKLA 867
            +D  LR+LL ++   +G    AA V        NA       +E+T   V++A+ FL    S  A+ YV RA+  V + T   T++  +VC+ARV DA+R F  AA ++ +LS+ +  D D   +  +L +A  C +LA    + R RL+ +I RD RA  L  F +++   + R L      A VR F   L EH          VL+RA++EHN+LAASR+Y NVA  +L  L+GV+    E  A+ MI  G L+ A+IDQVAG +AF A  + ++AWD+ +  L   V   AE  A+K+P +A
Sbjct:   91 LDVHLRELLSEVLQNEGEFEAAARVLSVAATSANAGSASFSDQEKTELCVKVAELFLVEEMSAQAETYVNRASTFVFNATEPMTILRHKVCKARVLDAKREFYKAACIFYQLSQTQNDDIDHDSIAEMLSNACTCVILAGAGERGRHRLMGSIYRDPRAVELDHFEVLENMYRERLLRWEEGGALVR-FEAALAEHQKADVGGGLTVLQRAVNEHNMLAASRVYSNVAFAELGTLLGVDAASAEDTASKMIKEGRLE-ATIDQVAGVLAFAAGAEALSAWDEHIKHLCLEVNAVAEAAAKKYPAVA 394          
BLAST of mRNA_M-pyrifera_M_contig74332.17606.1 vs. uniprot
Match: A0A1V8SYL2_9PEZI (COP9 signalosome complex subunit 4 n=3 Tax=Rachicladosporium TaxID=470018 RepID=A0A1V8SYL2_9PEZI)

HSP 1 Score: 145 bits (365), Expect = 7.630e-37
Identity = 99/267 (37.08%), Postives = 141/267 (52.81%), Query Frame = 1
Query:    1 EDVDWALRKLLFDIAVGDGNHSEAASVFV------NALRVPLEERTFTLVRIAQCFLAAGDSGNADVYVRRAAESVEDDTPLPTLVMLRVCRARVQDARRNFESAAQLYVELSRVEGLDTDPMELLSLLEDAAVCAVLARPSPQRQRLLTAIARDSRAPSLQSFRIVDAAQKGRFLTEAHVRSFRPLLKEHH------PPAVLERALHEHNILAASRIYRNVALPDLAALVGVEEDRCEAMAAAMIASGALQGASIDQVAGTVAFGA 765
            E  D AL+ LL D    D +   +A V        +   V  +E+    +RI +C+L  GDS NA  Y+ R  + + + T   T +   + +AR+ D+ RNF  A+  Y  LS    +D +  E L  L  A   AVLA   PQR R L  + +D RA     + I++     R L+ A V++F   LK+H          VL++A+ EHN+LA SR+Y+N+ALP L AL+GV+ DR E  AA M+ SG L G SIDQ+ G + FGA
Sbjct:  103 EQQDTALKFLLADAYEADEDFGSSAKVLQVITLDSSQRAVSDDEKAKVWMRICRCYLEEGDSTNATTYLNRVKQVIFNVTDAETRLFFALSQARISDSMRNFLDASAAYYTLSNESSIDEE--ERLHTLRQAITTAVLAPAGPQRARQLGRLYKDERASETPEYSILEKIFLDRLLSPAEVKTFAAELKDHQLAKTADGSTVLDKAVLEHNLLAVSRLYQNIALPSLGALLGVDADRAEEYAAGMVESGRL-GGSIDQMEGVIHFGA 366          
BLAST of mRNA_M-pyrifera_M_contig74332.17606.1 vs. uniprot
Match: A0A0G4FH25_9ALVE (COP9 signalosome complex subunit 4 n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FH25_9ALVE)

HSP 1 Score: 143 bits (360), Expect = 2.750e-36
Identity = 105/300 (35.00%), Postives = 155/300 (51.67%), Query Frame = 1
Query:    1 EDVDWALRKLLFDIAVGDGNHSEAASVF--VNALRVP-LEERTFTLVRIAQCFLAAGDSGNADVYVRRAAESVEDDTPLPTLVMLRVCRARVQDARRNFESAAQLYVELS-RVEGLDTDPMELLSLLEDAAVCAVLARPSPQRQRLLTAIARDSRAPSLQSFRIVDAAQKGRFLTEAHVRSFRPLLKEHHPPA------VLERALHEHNILAASRIYRNVALPDLAALVGVEEDRCEAMAAAMIASGALQGASIDQVAGTVAFGA-DTDPVAAWDKGLDILVRTVAKTAEEIAQKHPKLA 867
            E+ D   R+   DI   +G   EAA     +N  R   +++R   L+ IA+CFL   DS +A+ Y  +A   V +       +  RV  AR+ D++R F  AA  Y ELS    G++ D  +L  LL DAA C VLA   PQR RLL ++ ++ R  S+ +F +V      R +T A +++F   LKEH           LERA+ +HN+LAASR+Y+N+ L    AL+GVE  + E +A  MI    ++G S+DQ AG + F   +   + +WD  +  +   V   A + AQ   K A
Sbjct:   95 EEEDMMFREKYSDILREEGRFIEAAKCLSAINIERAKTVDDRCDKLITIAECFLEEDDSVSAEAYCNKAGMIVHEVENKVIELRYRVTYARILDSKRQFLLAANKYFELSLNPFGMEIDTQDLFQLLCDAATCCVLAPAGPQRSRLLNSLMKEDRIRSVPAFEMVKKMYLQRIVTPADLQAFSSTLKEHQVATDKEGVTYLERAVLQHNVLAASRVYKNMRLESFGALLGVEPLKAEKIATKMIREARMEG-SVDQKAGIIHFAQMEGQELVSWDCQIQRVCEKVNALAADAAQLMGKAA 393          
BLAST of mRNA_M-pyrifera_M_contig74332.17606.1 vs. uniprot
Match: A0A7S0A434_9DINO (COP9 signalosome complex subunit 4 n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0A434_9DINO)

HSP 1 Score: 142 bits (359), Expect = 4.790e-36
Identity = 96/279 (34.41%), Postives = 149/279 (53.41%), Query Frame = 1
Query:    1 EDVDWALRKLLFDIAVGDGNHSEAASVFV-------NALRVPLEERTFTLVRIAQCFLAAGDSGNADVYVRRAAESVEDDTPLPTLVMLRVCRARVQDARRNFESAAQLYVELSRVE-GLDTDPMELLSLLEDAAVCAVLARPSPQRQRLLTAIARDSRAPSLQSFRIVDAAQKGRFLTEAHVRSFRPLLKEHHPPA------VLERALHEHNILAASRIYRNVALPDLAALVGVEEDRCEAMAAAMIASGALQGASIDQVAGTVAFGADTDPVAAWDK 795
            E+ D+ +R+LL ++   +GN SEAA              R PL++     V+IA+ +L   D  +AD +  RAA  + +   +P  +  +VC AR+ D++R F  AA  Y +LS+   G      +L+ LL+ A  CA+LA   PQR R+L  + +D R  S++ + I+      R +  + V+ F   L  H          VLERA+ +HN+LAASR+Y+N+ LPDL  L+ V  +R E +AA MIA   L+G  IDQ +G + F    + +  WD+
Sbjct:  104 EEEDFVIRELLSEVFQAEGNWSEAAKCLAAINLETGTRCRTPLQKAE-KYVKIAELYLEDDDPVSADTFSTRAAMVMHEVEDVPLQLRFKVCHARILDSKRKFLEAASKYCDLSQQTFGGQICEADLVQLLKCAVTCAILAPAGPQRSRILALLCKDERIRSVEHYEILHKMFMERLIRGSEVQKFAESLLPHQKAVMGDGQTVLERAVVQHNVLAASRVYKNMRLPDLGLLLEVSGERAEKIAAKMIAEQRLEG-YIDQRSGVIHFEGGDEDLQQWDR 380          
BLAST of mRNA_M-pyrifera_M_contig74332.17606.1 vs. uniprot
Match: A0A250WRX9_9CHLO (COP9 signalosome complex subunit 4 n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WRX9_9CHLO)

HSP 1 Score: 140 bits (352), Expect = 4.350e-35
Identity = 91/258 (35.27%), Postives = 140/258 (54.26%), Query Frame = 1
Query:  130 VRIAQCFLAAGDSGNADVYVRRAAESVEDDTPLPTLVMLRVCRARVQDARRNFESAAQLYVELS-----RVEGLDTDPMELLSLLEDAAVCAVLARPSPQRQRLLTAIARDSRAPSLQSFRIVDAAQKGRFLTEAHVRSFRPLLKEHHPP------AVLERALHEHNILAASRIYRNVALPDLAALVGVEEDRCEAMAAAMIASGALQGASIDQVAGTVAFGADTDPVAAWDKGLDILVRTVAKTAEEIAQKHPKLAA 870
            ++IA  +L   D  NA++Y+++AA  +         +  +VC AR+ D++R F  AA  Y ELS     + EGL  DP EL+  L  A  C VLA    QR R+L+ + +D R+P L  + +++     R L+   V +F   LK H          VLERA+ +HNIL+AS++Y N++L +L AL+GV  +R E+++  MI+ G LQ AS+DQV   + F    + +  WD  +  L   V +  +E A    KL+A
Sbjct:  144 IKIAMLYLEDEDPVNAEMYIKKAASLIGTCKAADLELQYKVCYARILDSKRRFLEAALRYYELSLLSSQKAEGLTVDPEELIQSLGLAVTCTVLAPAGAQRSRMLSTLYKDERSPQLPVYPLLEKVYLERILSRQEVEAFAKTLKSHQMALLPDGTTVLERAVMQHNILSASKLYNNISLQELGALLGVASERAESISCDMISDGRLQ-ASVDQVENMIHFH-QGEVLLQWDAQIQSLCHKVNEIVDEAANAGIKLSA 399          
BLAST of mRNA_M-pyrifera_M_contig74332.17606.1 vs. uniprot
Match: A0A7S4LMK2_9EUGL (COP9 signalosome complex subunit 4 n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LMK2_9EUGL)

HSP 1 Score: 138 bits (347), Expect = 2.420e-34
Identity = 96/309 (31.07%), Postives = 152/309 (49.19%), Query Frame = 1
Query:    1 EDVDWALRKLLFDIAVGDGNHSEAASVFVNALRVPLEERTFTL---------VRIAQCFLAAGDSGNADVYVRRAAESVEDDTPLPTLVMLRVCRARVQDARRNFESAAQLYVELSRVEGLDTDPMELLSLLEDAAVCAVLARPSPQRQRLLTAIARDSRAPSLQS-FRIVDAAQKGRFLTEAHVRSFRPLLKEHHPP------AVLERALHEHNILAASRIYRNVALPDLAALVGVEEDRCEAMAAAMIASGALQGASIDQVAGTVAFGADTDPVAAWDKGLDILVRTVAKTAEEIAQKHPKLAADME 879
            ++   A+R+ L D+   + N  + A   +    +PL+  +  L         VRIAQ FL   D   A+ Y+ +    V         +  + C AR+QD +R F  AA  Y ELS++   D    EL   L+ A VC +L+   P+R RLL  + +D R   L   + +++     R L    V   R  LK HH         VLERA+ +HN+LAAS +Y N+   +L AL+G+  ++ E +A+ MIA   +QG SIDQ+   + F   +  +  WD+ +      V++  +E+ +KHP+ AA +E
Sbjct:   99 QEESTAIREKLADLYQEEENWKQCAMTLIG---IPLDSGSRALNEEYKLGHYVRIAQLFLEDDDHIQAETYINKCLPLVHSGIDPVLNLKYKACFARIQDCQRKFFEAATRYYELSQLVADDEQTAELA--LQSATVCTILSPAGPKRSRLLATLHKDERTNKLGPLYNVLEKMHMDRILRPEEVNQLREYLKPHHEAILADGQTVLERAVTQHNLLAASNLYYNITFGELGALLGISAEKAEQIASRMIAEERMQG-SIDQIESLIQFQNVSGVMTQWDEQISSACSFVSRICDEVIKKHPEYAAMLE 401          
BLAST of mRNA_M-pyrifera_M_contig74332.17606.1 vs. uniprot
Match: A0A6H0XQM1_9PEZI (COP9 signalosome complex subunit 4 n=1 Tax=Peltaster fructicola TaxID=286661 RepID=A0A6H0XQM1_9PEZI)

HSP 1 Score: 137 bits (344), Expect = 7.400e-34
Identity = 92/264 (34.85%), Postives = 137/264 (51.89%), Query Frame = 1
Query:  109 EERTFTLVRIAQCFLAAGDSGNADVYVRRAAESVEDDTPLPTLVMLRVCRARVQDARRNFESAAQLYVELSRVEGLDTDPMELLSLLEDAAVCAVLARPSPQRQRLLTAIARDSRAPSLQSFRIVDAAQKGRFLTEAHVRSFRPLLKEHH------PPAVLERALHEHNILAASRIYRNVALPDLAALVGVEEDRCEAMAAAMIASGALQGASIDQVAGTVAF-------GADTDPVAAWDKGLDILVRTVAKTAEEIAQKHPK 861
            +++  T +RI +C+L   D  NA  Y+ R  + + + T   T +  ++ +AR+ D++R+F  A+  Y  LS    +D +  E L  L  A  CAVLA   P R R L  + +D RA     + I++     R LT A V +F   LKEH          VL++A+ EHN+LA SR+YRN+   +L  L+GVE DR E  AA MI S  L G SIDQ+   + F       GA +  + AWD+ +  L   V K A  + ++ P+
Sbjct:  141 DDKARTWIRIVRCYLEEDDPTNAVSYLNRIKQIIYNVTDQVTRLQFQLSQARISDSQRSFLDASAAYYTLSNETAIDEE--ERLHTLSAAITCAVLAPAGPLRARQLGTLYKDERALETPEYSILEKIYLDRLLTRAEVEAFAAGLKEHQLAKTSDGSTVLDKAVLEHNLLAVSRLYRNITFDNLGTLLGVEADRAETYAAGMIESNRLSG-SIDQIDSVIHFNIRDGDRGAASAKMRAWDENIQNLAEEVEKVATLLQREEPQ 401          
BLAST of mRNA_M-pyrifera_M_contig74332.17606.1 vs. uniprot
Match: A0A2R5GAA6_9STRA (COP9 signalosome complex subunit 4 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GAA6_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.140e-33
Identity = 102/306 (33.33%), Postives = 163/306 (53.27%), Query Frame = 1
Query:    1 EDVDWALRKLLFDIAVGDGNHSEAASVF----VNALRVPLEERTFTLVRIAQCFLAAGDSGNADVYVRRAAESVEDDTPLPTLVMLRVCRARVQDARRNFESAAQLYVELSR----VEGLDTDPMELLSLLEDAAVCAVLARPSPQRQRLLTAIARDSRAPSLQ-SFRIVDAAQKGRFLTEAHVRSFRPLLKEHHPP------AVLERALHEHNILAASRIYRNVALPDLAALVGVEEDRCEAMAAAMIASGALQGASIDQVAGTVAFGADTD-PVAAWDKGLDILVRTVAKTAEEIAQKHPKLAA 870
            E+V+  +R+LL  +      + +AA V     +   R    ++    VRI + FL A ++  A+ +V RA++ +    PL   V  +V  AR+ DA+R F  AA  Y +LS     V+G      +L+ LL  +  CA+LA   PQRQR+L  + +D R+ +L  S+ +++     R LT A +  F   L+ H          VLERA+ EHN+LAA++IY NV+  +LA L+ +E+ R E++A+ MI    +QG +IDQV G + F A+ D P+ ++D  +  L   V    ++I + HP   A
Sbjct:  111 EEVEAKIRELLGAVLAEKELYVDAARVLSAINMEDARHSDAQKAEQYVRITELFLEADETVEAERFVNRASQYIYTCDPL-VQVRHKVSYARILDAKRRFLDAAHRYYKLSSESAMVDGKTVAEEDLMHLLSKSVTCAILASAGPQRQRMLNLLYKDERSRTLTTSWMVLEKMYMQRILTNAEIAVFEQQLEPHQKAILADGSTVLERAVLEHNVLAATKIYANVSFAELAKLLNIEQTRAESVASTMIKEKRMQG-TIDQVDGVLDFAAEEDDPLISFDARIQHLCHAVNGVLDQIEKTHPGFVA 414          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74332.17606.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DUA7_CAFRO2.050e-4737.29COP9 signalosome complex subunit 4 n=2 Tax=Cafeter... [more]
A0A812PX43_9DINO4.870e-4637.29COP9 signalosome complex subunit 4 n=1 Tax=Symbiod... [more]
A0A7S1C7T8_9STRA2.390e-4036.60COP9 signalosome complex subunit 4 n=1 Tax=Bicosoe... [more]
A0A1V8SYL2_9PEZI7.630e-3737.08COP9 signalosome complex subunit 4 n=3 Tax=Rachicl... [more]
A0A0G4FH25_9ALVE2.750e-3635.00COP9 signalosome complex subunit 4 n=1 Tax=Chromer... [more]
A0A7S0A434_9DINO4.790e-3634.41COP9 signalosome complex subunit 4 n=1 Tax=Pyrodin... [more]
A0A250WRX9_9CHLO4.350e-3535.27COP9 signalosome complex subunit 4 n=1 Tax=Chlamyd... [more]
A0A7S4LMK2_9EUGL2.420e-3431.07COP9 signalosome complex subunit 4 n=1 Tax=Eutrept... [more]
A0A6H0XQM1_9PEZI7.400e-3434.85COP9 signalosome complex subunit 4 n=1 Tax=Peltast... [more]
A0A2R5GAA6_9STRA1.140e-3333.33COP9 signalosome complex subunit 4 n=1 Tax=Hondaea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig74332contigM-pyrifera_M_contig74332:6..887 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score143.3
Seed ortholog evalue1.8e-31
Seed eggNOG ortholog157072.XP_008869268.1
Preferred nameCOPS4
KEGG koko:K02930,ko:K12178
KEGG Pathwayko03010,map03010
KEGG ModuleM00177,M00179
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000338,GO:0000715,GO:0001067,GO:0001654,GO:0001745,GO:0001751,GO:0001754,GO:0002009,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006464,GO:0006508,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007346,GO:0007399,GO:0007423,GO:0008021,GO:0008150,GO:0008152,GO:0008180,GO:0008233,GO:0008234,GO:0009653,GO:0009887,GO:0009888,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010389,GO:0010564,GO:0010605,GO:0010971,GO:0012505,GO:0016043,GO:0016333,GO:0016604,GO:0016607,GO:0016787,GO:0019222,GO:0019538,GO:0019783,GO:0019784,GO:0019827,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0030054,GO:0030133,GO:0030154,GO:0030162,GO:0030182,GO:0030718,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031410,GO:0031647,GO:0031974,GO:0031981,GO:0031982,GO:0032268,GO:0032269,GO:0032434,GO:0032435,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033554,GO:0034641,GO:0036099,GO:0036211,GO:0042176,GO:0042177,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043687,GO:0044212,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044456,GO:0044464,GO:0044703,GO:0045202,GO:0045787,GO:0045861,GO:0045931,GO:0046483,GO:0046530,GO:0048138,GO:0048140,GO:0048232,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048592,GO:0048609,GO:0048699,GO:0048729,GO:0048731,GO:0048749,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050821,GO:0050896,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051276,GO:0051704,GO:0051716,GO:0051726,GO:0060255,GO:0060429,GO:0061136,GO:0065007,GO:0065008,GO:0070011,GO:0070013,GO:0070382,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0080090,GO:0090068,GO:0090304,GO:0090596,GO:0097159,GO:0097458,GO:0097708,GO:0098727,GO:0098793,GO:0099503,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1901799,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902749,GO:1902751,GO:1903050,GO:1903051,GO:1903362,GO:1903363,GO:2000058,GO:2000059
EggNOG free text desc.protein deneddylation
EggNOG OGsKOG1497@1,KOG1497@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011,ko04121
Exons1
Model size882
Cds size882
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816642.0612667-CDS-M-pyrifera_M_contig74332:5..8871622816642.0612667-CDS-M-pyrifera_M_contig74332:5..887Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74332 6..887 +
1692278094.171703-CDS-M-pyrifera_M_contig74332:5..8871692278094.171703-CDS-M-pyrifera_M_contig74332:5..887Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74332 6..887 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig74332.17606.1prot_M-pyrifera_M_contig74332.17606.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig74332 6..887 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig74332.17606.1

>prot_M-pyrifera_M_contig74332.17606.1 ID=prot_M-pyrifera_M_contig74332.17606.1|Name=mRNA_M-pyrifera_M_contig74332.17606.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=294bp
EDVDWALRKLLFDIAVGDGNHSEAASVFVNALRVPLEERTFTLVRIAQCF
LAAGDSGNADVYVRRAAESVEDDTPLPTLVMLRVCRARVQDARRNFESAA
QLYVELSRVEGLDTDPMELLSLLEDAAVCAVLARPSPQRQRLLTAIARDS
RAPSLQSFRIVDAAQKGRFLTEAHVRSFRPLLKEHHPPAVLERALHEHNI
LAASRIYRNVALPDLAALVGVEEDRCEAMAAAMIASGALQGASIDQVAGT
VAFGADTDPVAAWDKGLDILVRTVAKTAEEIAQKHPKLAADME*
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mRNA from alignment at M-pyrifera_M_contig74332:6..887+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig74332.17606.1 ID=mRNA_M-pyrifera_M_contig74332.17606.1|Name=mRNA_M-pyrifera_M_contig74332.17606.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=882bp|location=Sequence derived from alignment at M-pyrifera_M_contig74332:6..887+ (Macrocystis pyrifera P11B4 male)
GAGGATGTGGATTGGGCGTTGCGGAAGCTGTTGTTCGACATTGCAGTTGG CGATGGAAATCACAGCGAGGCCGCAAGTGTTTTTGTTAACGCGTTGCGAG TGCCTTTGGAAGAGCGCACGTTCACGCTAGTGCGCATCGCGCAGTGTTTC TTGGCGGCTGGAGACAGCGGAAATGCAGACGTGTATGTGCGTCGTGCAGC AGAGAGTGTGGAAGACGACACTCCACTGCCCACGCTGGTGATGCTGCGCG TGTGTCGGGCGAGAGTGCAGGATGCGAGGCGAAACTTTGAGTCAGCTGCT CAGCTGTACGTGGAGCTGAGTCGCGTGGAGGGTCTGGACACAGACCCCAT GGAGCTGCTGAGTCTGTTGGAGGACGCGGCAGTGTGTGCCGTGTTGGCTC GGCCCAGTCCACAACGCCAGCGTCTCCTCACGGCGATCGCAAGGGACAGC CGAGCTCCTTCGCTGCAATCCTTCCGCATCGTGGACGCGGCCCAAAAAGG TCGGTTCCTCACCGAGGCGCACGTGCGTTCCTTCCGCCCGCTGCTCAAGG AGCACCACCCTCCAGCCGTGCTGGAGCGGGCGCTGCACGAGCACAACATC CTGGCAGCCTCGCGCATCTACCGCAACGTGGCTCTTCCAGACCTCGCAGC CCTCGTGGGGGTGGAGGAGGACCGCTGTGAGGCCATGGCAGCTGCCATGA TCGCCTCCGGGGCGCTCCAAGGAGCCTCCATCGACCAGGTCGCAGGAACA GTCGCCTTCGGAGCGGACACAGACCCCGTCGCCGCCTGGGACAAGGGACT CGACATCCTAGTCAGAACCGTCGCCAAAACCGCTGAGGAAATCGCACAAA AACACCCAAAACTAGCAGCTGACATGGAATGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig74332:6..887+

>mRNA_M-pyrifera_M_contig74332.17606.1 ID=mRNA_M-pyrifera_M_contig74332.17606.1|Name=mRNA_M-pyrifera_M_contig74332.17606.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1764bp|location=Sequence derived from alignment at M-pyrifera_M_contig74332:6..887+ (Macrocystis pyrifera P11B4 male)
GAGGATGTGGATTGGGCGTTGCGGAAGCTGTTGTTCGACATTGCAGTTGG
CGATGGAAATCACAGCGAGGCCGCAAGTGTTTTTGTTAACGCGTTGCGAG
TGCCTTTGGAAGAGCGCACGTTCACGCTAGTGCGCATCGCGCAGTGTTTC
TTGGCGGCTGGAGACAGCGGAAATGCAGACGTGTATGTGCGTCGTGCAGC
AGAGAGTGTGGAAGACGACACTCCACTGCCCACGCTGGTGATGCTGCGCG
TGTGTCGGGCGAGAGTGCAGGATGCGAGGCGAAACTTTGAGTCAGCTGCT
CAGCTGTACGTGGAGCTGAGTCGCGTGGAGGGTCTGGACACAGACCCCAT
GGAGCTGCTGAGTCTGTTGGAGGACGCGGCAGTGTGTGCCGTGTTGGCTC
GGCCCAGTCCACAACGCCAGCGTCTCCTCACGGCGATCGCAAGGGACAGC
CGAGCTCCTTCGCTGCAATCCTTCCGCATCGTGGACGCGGCCCAAAAAGG
TCGGTTCCTCACCGAGGCGCACGTGCGTTCCTTCCGCCCGCTGCTCAAGG
AGCACCACCCTCCAGCCGTGCTGGAGCGGGCGCTGCACGAGCACAACATC
CTGGCAGCCTCGCGCATCTACCGCAACGTGGCTCTTCCAGACCTCGCAGC
CCTCGTGGGGGTGGAGGAGGACCGCTGTGAGGCCATGGCAGCTGCCATGA
TCGCCTCCGGGGCGCTCCAAGGAGCCTCCATCGACCAGGTCGCAGGAACA
GTCGCCTTCGGAGCGGACACAGACCCCGTCGCCGCCTGGGACAAGGGACT
CGACATCCTAGTCAGAACCGTCGCCAAAACCGCTGAGGAAATCGCACAAA
AACACCCAAAACTAGCAGCTGACATGGAATGAGAGGATGTGGATTGGGCG
TTGCGGAAGCTGTTGTTCGACATTGCAGTTGGCGATGGAAATCACAGCGA
GGCCGCAAGTGTTTTTGTTAACGCGTTGCGAGTGCCTTTGGAAGAGCGCA
CGTTCACGCTAGTGCGCATCGCGCAGTGTTTCTTGGCGGCTGGAGACAGC
GGAAATGCAGACGTGTATGTGCGTCGTGCAGCAGAGAGTGTGGAAGACGA
CACTCCACTGCCCACGCTGGTGATGCTGCGCGTGTGTCGGGCGAGAGTGC
AGGATGCGAGGCGAAACTTTGAGTCAGCTGCTCAGCTGTACGTGGAGCTG
AGTCGCGTGGAGGGTCTGGACACAGACCCCATGGAGCTGCTGAGTCTGTT
GGAGGACGCGGCAGTGTGTGCCGTGTTGGCTCGGCCCAGTCCACAACGCC
AGCGTCTCCTCACGGCGATCGCAAGGGACAGCCGAGCTCCTTCGCTGCAA
TCCTTCCGCATCGTGGACGCGGCCCAAAAAGGTCGGTTCCTCACCGAGGC
GCACGTGCGTTCCTTCCGCCCGCTGCTCAAGGAGCACCACCCTCCAGCCG
TGCTGGAGCGGGCGCTGCACGAGCACAACATCCTGGCAGCCTCGCGCATC
TACCGCAACGTGGCTCTTCCAGACCTCGCAGCCCTCGTGGGGGTGGAGGA
GGACCGCTGTGAGGCCATGGCAGCTGCCATGATCGCCTCCGGGGCGCTCC
AAGGAGCCTCCATCGACCAGGTCGCAGGAACAGTCGCCTTCGGAGCGGAC
ACAGACCCCGTCGCCGCCTGGGACAAGGGACTCGACATCCTAGTCAGAAC
CGTCGCCAAAACCGCTGAGGAAATCGCACAAAAACACCCAAAACTAGCAG
CTGACATGGAATGA
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