mRNA_M-pyrifera_M_contig7347.17419.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7347.17419.1 vs. uniprot
Match: D7FQ94_ECTSI (Small nucleolar ribonucleoprotein U3 component n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ94_ECTSI) HSP 1 Score: 292 bits (748), Expect = 1.350e-98 Identity = 148/155 (95.48%), Postives = 151/155 (97.42%), Query Frame = 1 Query: 1 QVLRRYLVQNRDDYVKYNKIVGLITKLTSRLKTLDPSDEFRIKMTEQLLAKLFTMGVINTKKSLAKTETASVSAFCRRRLPVVMVRLKMSETLTEATTYIEQGHVRVGPHAVTDAAFLVTRSMEDFVTWVDGSKIKRAIKTYEDKVDDFDLLGEG 465 QVLRRYLVQNRDDYVKYNKIVGLITKLT+RLKTLD SDEFRIKMTEQLL KLF MG+INTKKSLAKTETASVS+FCRRRLPVVMVRLKMSETLTEATTYIEQGHVRVGPHAVTD AFLVTRSMEDFVTWVDGSKIKRAIKTYEDKVDDFDLLGEG Sbjct: 30 QVLRRYLVQNRDDYVKYNKIVGLITKLTARLKTLDASDEFRIKMTEQLLEKLFAMGIINTKKSLAKTETASVSSFCRRRLPVVMVRLKMSETLTEATTYIEQGHVRVGPHAVTDPAFLVTRSMEDFVTWVDGSKIKRAIKTYEDKVDDFDLLGEG 184
BLAST of mRNA_M-pyrifera_M_contig7347.17419.1 vs. uniprot
Match: W7TBD6_9STRA (Ribosomal protein S4/S9 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TBD6_9STRA) HSP 1 Score: 226 bits (577), Expect = 1.360e-72 Identity = 110/153 (71.90%), Postives = 130/153 (84.97%), Query Frame = 1 Query: 1 QVLRRYLVQNRDDYVKYNKIVGLITKLTSRLKTLDPSDEFRIKMTEQLLAKLFTMGVINTKKSLAKTETASVSAFCRRRLPVVMVRLKMSETLTEATTYIEQGHVRVGPHAVTDAAFLVTRSMEDFVTWVDGSKIKRAIKTYEDKVDDFDLLG 459 ++LRRY +Q+R+DYVKYNKI G ITKLT++LK L P DEFRIKMT+ LL+KL+ MG+I TKKSL++ ET + SAFCRRRLPVVMVR+KM+ETL EA T+IEQGHVRVGP VTD FLVTRS EDF+TWVD SKIKRA+ Y DK+DDFDLLG Sbjct: 30 KILRRYHIQDREDYVKYNKICGHITKLTAKLKDLKPEDEFRIKMTDDLLSKLYNMGLIPTKKSLSQCETLAASAFCRRRLPVVMVRMKMAETLKEAVTFIEQGHVRVGPTVVTDPTFLVTRSQEDFLTWVDSSKIKRAVVAYNDKLDDFDLLG 182
BLAST of mRNA_M-pyrifera_M_contig7347.17419.1 vs. uniprot
Match: A0A836CN51_9STRA (Small nucleolar ribonucleoprotein U3 component n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN51_9STRA) HSP 1 Score: 224 bits (570), Expect = 1.630e-71 Identity = 109/155 (70.32%), Postives = 131/155 (84.52%), Query Frame = 1 Query: 1 QVLRRYLVQNRDDYVKYNKIVGLITKLTSRLKTLDPSDEFRIKMTEQLLAKLFTMGVINTKKSLAKTETASVSAFCRRRLPVVMVRLKMSETLTEATTYIEQGHVRVGPHAVTDAAFLVTRSMEDFVTWVDGSKIKRAIKTYEDKVDDFDLLGEG 465 +VLRRY +Q+R+DYVKYN++VG +T L ++LKTL +D FR+KMT QLL+KL ++GVI+T+KSL K E +VSAFCRRRLPVVMVR KMSETL EA T+IE GH+RVGP+ VTD AFLVTR+MEDFVTWVD SKIKR I Y DK+DDFDLLGEG Sbjct: 30 KVLRRYHIQDREDYVKYNRLVGHVTSLAAKLKTLSSTDPFRVKMTSQLLSKLQSIGVIDTEKSLIKAEQLTVSAFCRRRLPVVMVRAKMSETLREAITFIESGHIRVGPNVVTDPAFLVTRTMEDFVTWVDSSKIKRTIAKYNDKLDDFDLLGEG 184
BLAST of mRNA_M-pyrifera_M_contig7347.17419.1 vs. uniprot
Match: A0A6S9JYI8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9JYI8_HETAK) HSP 1 Score: 221 bits (564), Expect = 1.280e-70 Identity = 107/153 (69.93%), Postives = 127/153 (83.01%), Query Frame = 1 Query: 1 QVLRRYLVQNRDDYVKYNKIVGLITKLTSRLKTLDPSDEFRIKMTEQLLAKLFTMGVINTKKSLAKTETASVSAFCRRRLPVVMVRLKMSETLTEATTYIEQGHVRVGPHAVTDAAFLVTRSMEDFVTWVDGSKIKRAIKTYEDKVDDFDLLG 459 +++RRYL+Q+R+DY KYNKI G + KL ++L+ L P+D+FRIKMTE LL KLF MGVIN+KKSL E +VSAFCRRRLPVVMVRLKMSET+ EA T+IE GHVRVGPH VTD AFLV R+MEDF+TWVD SKIKR I Y DK+DD+DLLG Sbjct: 30 KIIRRYLLQDREDYTKYNKICGHMWKLVAKLRALPPTDQFRIKMTEDLLEKLFNMGVINSKKSLQLVEKVNVSAFCRRRLPVVMVRLKMSETIKEAITFIEHGHVRVGPHCVTDPAFLVPRAMEDFLTWVDSSKIKRTIMKYNDKLDDYDLLG 182
BLAST of mRNA_M-pyrifera_M_contig7347.17419.1 vs. uniprot
Match: A0A6U3VKU4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3VKU4_9STRA) HSP 1 Score: 214 bits (545), Expect = 9.250e-68 Identity = 104/152 (68.42%), Postives = 122/152 (80.26%), Query Frame = 1 Query: 1 QVLRRYLVQNRDDYVKYNKIVGLITKLTSRLKTLDPSDEFRIKMTEQLLAKLFTMGVINTKKSLAKTETASVSAFCRRRLPVVMVRLKMSETLTEATTYIEQGHVRVGPHAVTDAAFLVTRSMEDFVTWVDGSKIKRAIKTYEDKVDDFDLL 456 ++LRRY +QNR+DYV YNKI GL+TKLT++LK L P D FRI MTEQLL KL MG++ T KSL K ET + +A CRRRLPVVMVR+KMSETL A T IEQG VRVGP+ VTD +FLVTR MEDFVTWVD SKI+RA+ Y DK+DDFDL+ Sbjct: 30 KILRRYHIQNREDYVAYNKICGLVTKLTAKLKNLPPDDPFRIHMTEQLLTKLHDMGILTTTKSLQKAETITATALCRRRLPVVMVRMKMSETLRNAITLIEQGQVRVGPNVVTDPSFLVTRGMEDFVTWVDSSKIRRAVHKYNDKLDDFDLM 181
BLAST of mRNA_M-pyrifera_M_contig7347.17419.1 vs. uniprot
Match: D8UBE0_VOLCA (Uncharacterized protein n=2 Tax=Volvox TaxID=3066 RepID=D8UBE0_VOLCA) HSP 1 Score: 214 bits (544), Expect = 1.360e-67 Identity = 106/152 (69.74%), Postives = 124/152 (81.58%), Query Frame = 1 Query: 1 QVLRRYLVQNRDDYVKYNKIVGLITKLTSRLKTLDPSDEFRIKMTEQLLAKLFTMGVINTKKSLAKTETASVSAFCRRRLPVVMVRLKMSETLTEATTYIEQGHVRVGPHAVTDAAFLVTRSMEDFVTWVDGSKIKRAIKTYEDKVDDFDLL 456 QVLRRY +Q+RDDY KYNKI G+ITKLTS LK LDP D RI++T+QLL KL+ MGV+ TKKSL + + + +AFCRRRL VVMVRLKMSETL EA T+IEQGHVRVGP VTD AF VTR+MEDFVTWVD SK+KR + Y DK+DD+DLL Sbjct: 30 QVLRRYHIQDRDDYKKYNKICGMITKLTSMLKRLDPKDATRIELTDQLLEKLYNMGVLPTKKSLVQCDKLATAAFCRRRLAVVMVRLKMSETLREAATFIEQGHVRVGPDTVTDPAFHVTRNMEDFVTWVDTSKVKRKVLKYNDKLDDYDLL 181
BLAST of mRNA_M-pyrifera_M_contig7347.17419.1 vs. uniprot
Match: A0A7S1VV42_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VV42_9STRA) HSP 1 Score: 212 bits (540), Expect = 5.310e-67 Identity = 100/152 (65.79%), Postives = 123/152 (80.92%), Query Frame = 1 Query: 1 QVLRRYLVQNRDDYVKYNKIVGLITKLTSRLKTLDPSDEFRIKMTEQLLAKLFTMGVINTKKSLAKTETASVSAFCRRRLPVVMVRLKMSETLTEATTYIEQGHVRVGPHAVTDAAFLVTRSMEDFVTWVDGSKIKRAIKTYEDKVDDFDLL 456 ++LRRY +Q RDDY YN+I G++TKL ++LKTL D FRI MT+QLL KLF MG+I TKKSL K E + SA CRRR+PVVMVR+KM+ET+ A T++EQGHVRVGPH VTD AFLVT +MED+VTWVD SKI+RA++ Y DK+DDFDLL Sbjct: 30 KILRRYHIQKRDDYTSYNRICGMVTKLAAKLKTLKQDDPFRIAMTDQLLQKLFDMGLITTKKSLLKAEELTASALCRRRIPVVMVRMKMAETVKAAVTFVEQGHVRVGPHVVTDPAFLVTITMEDYVTWVDSSKIRRAVQKYNDKLDDFDLL 181
BLAST of mRNA_M-pyrifera_M_contig7347.17419.1 vs. uniprot
Match: A0A7S1U2R4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2R4_9STRA) HSP 1 Score: 211 bits (537), Expect = 1.620e-66 Identity = 103/152 (67.76%), Postives = 123/152 (80.92%), Query Frame = 1 Query: 4 VLRRYLVQNRDDYVKYNKIVGLITKLTSRLKTLDPSDEFRIKMTEQLLAKLFTMGVINTKKSLAKTETASVSAFCRRRLPVVMVRLKMSETLTEATTYIEQGHVRVGPHAVTDAAFLVTRSMEDFVTWVDGSKIKRAIKTYEDKVDDFDLLG 459 VLRRY VQ+RDDYVKYN++ GLITKL ++LK L PSD FRIK +++LL KL+ +GVI+TKKSL K E S +AFCRRRLPVVMVRLKM+ET+ A Y+EQGHVRVGP+ VTD FL R+MEDFVTW D SK+KR I Y DK+DD+DLLG Sbjct: 31 VLRRYHVQDRDDYVKYNRLAGLITKLVAQLKKLPPSDPFRIKKSDKLLGKLYELGVIDTKKSLEKAERISAAAFCRRRLPVVMVRLKMAETVRLAAQYVEQGHVRVGPNTVTDPGFLAKRTMEDFVTWADSSKMKRHIAKYNDKLDDYDLLG 182
BLAST of mRNA_M-pyrifera_M_contig7347.17419.1 vs. uniprot
Match: A0A250X5I3_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X5I3_9CHLO) HSP 1 Score: 210 bits (535), Expect = 3.150e-66 Identity = 106/152 (69.74%), Postives = 125/152 (82.24%), Query Frame = 1 Query: 1 QVLRRYLVQNRDDYVKYNKIVGLITKLTSRLKTLDPSDEFRIKMTEQLLAKLFTMGVINTKKSLAKTETASVSAFCRRRLPVVMVRLKMSETLTEATTYIEQGHVRVGPHAVTDAAFLVTRSMEDFVTWVDGSKIKRAIKTYEDKVDDFDLL 456 QV+RRY +Q+RDDY KYNKIVGLITKLTS LK LD D RI++T+QLL KLF+MGV+ TKKSL +TE +VSAFCRRRL VVM+RLKM+ET+ EA T+IEQGHVRVG VT+ AF VT +MEDFVTWVD SKIKR + Y DK+DD+DLL Sbjct: 30 QVMRRYHIQDRDDYKKYNKIVGLITKLTSVLKQLDAKDTARIELTDQLLEKLFSMGVVPTKKSLVQTEKLAVSAFCRRRLSVVMMRLKMAETMKEAVTFIEQGHVRVGTETVTNPAFHVTTNMEDFVTWVDTSKIKRKVLMYNDKLDDYDLL 181
BLAST of mRNA_M-pyrifera_M_contig7347.17419.1 vs. uniprot
Match: E1ZQC4_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZQC4_CHLVA) HSP 1 Score: 210 bits (534), Expect = 4.620e-66 Identity = 103/152 (67.76%), Postives = 122/152 (80.26%), Query Frame = 1 Query: 1 QVLRRYLVQNRDDYVKYNKIVGLITKLTSRLKTLDPSDEFRIKMTEQLLAKLFTMGVINTKKSLAKTETASVSAFCRRRLPVVMVRLKMSETLTEATTYIEQGHVRVGPHAVTDAAFLVTRSMEDFVTWVDGSKIKRAIKTYEDKVDDFDLL 456 QV+RRY +Q+RDDY KYNK+ G++TKL + LK LD D RI++T+QLL KL MGVI TKKSL + E S ++FCRRRL V+MVRLKMSETL EA T+IEQGHVRVGP VTD AFLVTRSMEDFVTWVD SKIKR + Y DK+DDFD++ Sbjct: 30 QVMRRYHIQDRDDYSKYNKVCGMVTKLVATLKRLDARDSTRIELTDQLLDKLHNMGVITTKKSLVQLEKLSTASFCRRRLSVIMVRLKMSETLREACTFIEQGHVRVGPDTVTDPAFLVTRSMEDFVTWVDTSKIKRKVLRYNDKLDDFDIM 181 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7347.17419.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7347.17419.1 >prot_M-pyrifera_M_contig7347.17419.1 ID=prot_M-pyrifera_M_contig7347.17419.1|Name=mRNA_M-pyrifera_M_contig7347.17419.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=113bp MTEQLLAKLFTMGVINTKKSLAKTETASVSAFCRRRLPVVMVRLKMSETLback to top mRNA from alignment at M-pyrifera_M_contig7347:10578..12895- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7347.17419.1 ID=mRNA_M-pyrifera_M_contig7347.17419.1|Name=mRNA_M-pyrifera_M_contig7347.17419.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2318bp|location=Sequence derived from alignment at M-pyrifera_M_contig7347:10578..12895- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7347:10578..12895- >mRNA_M-pyrifera_M_contig7347.17419.1 ID=mRNA_M-pyrifera_M_contig7347.17419.1|Name=mRNA_M-pyrifera_M_contig7347.17419.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=678bp|location=Sequence derived from alignment at M-pyrifera_M_contig7347:10578..12895- (Macrocystis pyrifera P11B4 male)back to top |