mRNA_M-pyrifera_M_contig73380.17401.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig73380.17401.1
Unique NamemRNA_M-pyrifera_M_contig73380.17401.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig73380.17401.1 vs. uniprot
Match: A0A7C9E074_OPUST (RNA helicase (Fragment) n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9E074_OPUST)

HSP 1 Score: 303 bits (777), Expect = 1.700e-96
Identity = 151/244 (61.89%), Postives = 189/244 (77.46%), Query Frame = 1
Query:    1 KAMLIPLPSLYHSEIEYDPFRKVFYREHPDIQAMSKEEVKAYRELSHIRVSGANAPRPVKTFAQMNLPVRLSRAIEKQGYEDPTPIQKQAVPVGLSGRDLIGIAKTGSGKTAAFMWPLLVHVDAQRGVKRGEGPIAVVVAPTRELAHQIYVEGKKFSKKLSVRLCPIYGGVSKAEQIKQLKAGVEVLVCTPGRLMDFLRMKKITSMRRVTFLVLDEADRMFDMGFEPQVRSIAGQIRPDRQSTL 732
            K  + P+P+L HSEI+Y+ F K FY E P I  MS++EV  YR+  +IR+SG + PRPVKTF     P  L  AI+KQGYE PT IQ QA+P+ LSGRD+IGIAKTGSGKTAAF+ P++VHV  Q  + +G+GPI V+ APTRELAHQIY+E +KF+K   VR+  +YGG+SK EQ K+LKAG E++V TPGRL+D L+MK +T MRR T+LVLDEADRMFD+GFEPQ+RSI GQIRPDRQ+ L
Sbjct:  171 KKKIEPIPALDHSEIDYESFNKDFYEERPSISGMSEQEVIEYRKSLNIRISGFDVPRPVKTFEDCGFPSPLMSAIKKQGYEKPTNIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHVMDQPELDKGDGPIGVICAPTRELAHQIYLEARKFAKPYGVRISAVYGGMSKLEQFKELKAGSEIVVATPGRLIDLLKMKALT-MRRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLL 413          
BLAST of mRNA_M-pyrifera_M_contig73380.17401.1 vs. uniprot
Match: A0A5J5C2J5_9ASTE (Uncharacterized protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5C2J5_9ASTE)

HSP 1 Score: 299 bits (765), Expect = 2.530e-96
Identity = 147/244 (60.25%), Postives = 187/244 (76.64%), Query Frame = 1
Query:    1 KAMLIPLPSLYHSEIEYDPFRKVFYREHPDIQAMSKEEVKAYRELSHIRVSGANAPRPVKTFAQMNLPVRLSRAIEKQGYEDPTPIQKQAVPVGLSGRDLIGIAKTGSGKTAAFMWPLLVHVDAQRGVKRGEGPIAVVVAPTRELAHQIYVEGKKFSKKLSVRLCPIYGGVSKAEQIKQLKAGVEVLVCTPGRLMDFLRMKKITSMRRVTFLVLDEADRMFDMGFEPQVRSIAGQIRPDRQSTL 732
            K  + P+P+L HS IEY+PF K FY E P I  MS+++V  Y++   IRVSG + PRP+KTF      + L +AI KQ YE PTPIQ QA+P+ LSGRD+IGIAKTGSGKTAAFM P++VH+  Q  +++ EGPI V+ APTRELAHQIY+E KKF+K   +R+  +YGG+SK +Q K+LKAG E++V TPGRL+D L+MK +T M R T+LVLDEADRMFD+GFEPQ+RSI GQIRPDRQ+ L
Sbjct:  167 KKKIEPIPALDHSLIEYEPFNKDFYEEQPSISGMSEQDVGEYQKSLAIRVSGFDVPRPIKTFEDSGFSLELMKAISKQAYEKPTPIQCQALPIVLSGRDIIGIAKTGSGKTAAFMLPVIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLEAKKFAKSHGIRVAAVYGGMSKLDQFKELKAGCEIVVATPGRLIDMLKMKALT-MLRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLL 409          
BLAST of mRNA_M-pyrifera_M_contig73380.17401.1 vs. uniprot
Match: A0A1U7V8A3_NICSY (DEAD-box ATP-dependent RNA helicase 24 isoform X2 n=3 Tax=Solanaceae TaxID=4070 RepID=A0A1U7V8A3_NICSY)

HSP 1 Score: 300 bits (767), Expect = 7.340e-95
Identity = 151/244 (61.89%), Postives = 184/244 (75.41%), Query Frame = 1
Query:    1 KAMLIPLPSLYHSEIEYDPFRKVFYREHPDIQAMSKEEVKAYRELSHIRVSGANAPRPVKTFAQMNLPVRLSRAIEKQGYEDPTPIQKQAVPVGLSGRDLIGIAKTGSGKTAAFMWPLLVHVDAQRGVKRGEGPIAVVVAPTRELAHQIYVEGKKFSKKLSVRLCPIYGGVSKAEQIKQLKAGVEVLVCTPGRLMDFLRMKKITSMRRVTFLVLDEADRMFDMGFEPQVRSIAGQIRPDRQSTL 732
            K  + P+P+L HSEI+Y+ F K FY E P I  MS  EV  YR    IRVSG + PRPVKTF      V L +AI KQGYE PTPIQ QA+P+ LSGRD+IGIAKTGSGKTAAF+ P++VH+  Q  +++ EGPI V+ APTRELAHQI+VE KKFSK   +R+  +YGG+SK +Q K+LKAG E++V TPGRL+D LR KK  +M R T+LVLDEADRMFD+GFEPQ+RSI GQIRPDRQ+ L
Sbjct:  173 KKKIEPIPALEHSEIDYEAFNKDFYEEKPSISGMSDPEVNEYRSSLAIRVSGFDVPRPVKTFEDCGFSVELMKAISKQGYEKPTPIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMVVHIMDQPELQKEEGPIGVICAPTRELAHQIFVEAKKFSKSHGIRVSAVYGGMSKLDQYKELKAGCEIVVATPGRLIDMLR-KKAFTMLRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLL 415          
BLAST of mRNA_M-pyrifera_M_contig73380.17401.1 vs. uniprot
Match: A0A7J7G7C5_CAMSI (Uncharacterized protein n=1 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7G7C5_CAMSI)

HSP 1 Score: 296 bits (758), Expect = 1.190e-94
Identity = 147/244 (60.25%), Postives = 186/244 (76.23%), Query Frame = 1
Query:    1 KAMLIPLPSLYHSEIEYDPFRKVFYREHPDIQAMSKEEVKAYRELSHIRVSGANAPRPVKTFAQMNLPVRLSRAIEKQGYEDPTPIQKQAVPVGLSGRDLIGIAKTGSGKTAAFMWPLLVHVDAQRGVKRGEGPIAVVVAPTRELAHQIYVEGKKFSKKLSVRLCPIYGGVSKAEQIKQLKAGVEVLVCTPGRLMDFLRMKKITSMRRVTFLVLDEADRMFDMGFEPQVRSIAGQIRPDRQSTL 732
            K  + P+P+L HS IEY+P  K FY E P I  MS+++V  YR    IRVSG + PRP+KTF +    V L +AI KQ YE PTPIQ QA+P+ LSGRD+IGIAKTGSGKTAAF+ P++VH+  Q  +++ EGPI V+ APTRELAHQIY+E KKF+K   +R+  +YGG+SK EQ K+LKAG E++V TPGRL+D L+MK +T M R ++LVLDEADRMFD+GFEPQ+RSI GQIRPDRQ+ L
Sbjct:  167 KNKIEPIPALDHSSIEYEPINKDFYEETPSISGMSEQDVVEYRNSLAIRVSGFDVPRPIKTFEEGGFSVELMKAIAKQAYEKPTPIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVICAPTRELAHQIYLEAKKFAKSHGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALT-MFRASYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLL 409          
BLAST of mRNA_M-pyrifera_M_contig73380.17401.1 vs. uniprot
Match: UPI00090160F2 (DEAD-box ATP-dependent RNA helicase 24 n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00090160F2)

HSP 1 Score: 302 bits (774), Expect = 1.400e-94
Identity = 151/244 (61.89%), Postives = 186/244 (76.23%), Query Frame = 1
Query:    1 KAMLIPLPSLYHSEIEYDPFRKVFYREHPDIQAMSKEEVKAYRELSHIRVSGANAPRPVKTFAQMNLPVRLSRAIEKQGYEDPTPIQKQAVPVGLSGRDLIGIAKTGSGKTAAFMWPLLVHVDAQRGVKRGEGPIAVVVAPTRELAHQIYVEGKKFSKKLSVRLCPIYGGVSKAEQIKQLKAGVEVLVCTPGRLMDFLRMKKITSMRRVTFLVLDEADRMFDMGFEPQVRSIAGQIRPDRQSTL 732
            K  + P+P+L HS I+Y+PF K FY E+P I  MS+++V  YR    IRVSG + PRPVKTF      V L +AI KQ YE PTPIQ QA+P+ LSG D+IGIAKTGSGKTAAF+ PL+VH+  Q  +++ EGPI V+ APTRELAHQIYVE KKF+K   +R+  +YGG+SK EQ K+LKAG E++V TPGRL+D LRMK +T M R T+LVLDEADRMFD+GFEPQ+RSI GQIRPDRQ+ L
Sbjct:  171 KKKIEPIPALDHSSIDYEPFNKDFYEENPSISGMSEQDVIEYRNSLAIRVSGFDVPRPVKTFEDCGFSVELLKAISKQAYEKPTPIQCQALPIALSGGDIIGIAKTGSGKTAAFVLPLMVHIMDQPELEKEEGPIGVICAPTRELAHQIYVETKKFAKSHGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLRMKAVT-MTRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLL 413          
BLAST of mRNA_M-pyrifera_M_contig73380.17401.1 vs. uniprot
Match: A0A453I8C6_AEGTS (Uncharacterized protein n=3 Tax=Triticeae TaxID=147389 RepID=A0A453I8C6_AEGTS)

HSP 1 Score: 293 bits (749), Expect = 2.040e-94
Identity = 147/239 (61.51%), Postives = 181/239 (75.73%), Query Frame = 1
Query:   16 PLPSLYHSEIEYDPFRKVFYREHPDIQAMSKEEVKAYRELSHIRVSGANAPRPVKTFAQMNLPVRLSRAIEKQGYEDPTPIQKQAVPVGLSGRDLIGIAKTGSGKTAAFMWPLLVHVDAQRGVKRGEGPIAVVVAPTRELAHQIYVEGKKFSKKLSVRLCPIYGGVSKAEQIKQLKAGVEVLVCTPGRLMDFLRMKKITSMRRVTFLVLDEADRMFDMGFEPQVRSIAGQIRPDRQSTL 732
            P+P L HS IEY+PF K FY E P +  MS EEV  Y +   IRVSG + PRPVK F     PV L  AI KQGYE PT IQ QA+P+ LSGRD+IGIAKTGSGKTAAF+ P++VH+  Q  +++ EGPI V+ APTRELAHQIY+E KKF+K  ++++  +YGGVSK EQ K+LK+G E++V TPGRL+D L+MK +  M R T+LVLDEADRMFD+GFEPQ+RSI GQIRPDRQ+ L
Sbjct:    4 PIPPLDHSTIEYEPFTKDFYEEKPSVSGMSVEEVADYMKSLAIRVSGFDVPRPVKNFEDCGFPVPLMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLEAKKFAKPYNLQVAAVYGGVSKFEQFKELKSGCEIVVATPGRLIDLLKMKAL-KMFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLL 241          
BLAST of mRNA_M-pyrifera_M_contig73380.17401.1 vs. uniprot
Match: A0A328DDJ7_9ASTE (Uncharacterized protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328DDJ7_9ASTE)

HSP 1 Score: 302 bits (773), Expect = 2.140e-94
Identity = 151/244 (61.89%), Postives = 184/244 (75.41%), Query Frame = 1
Query:    1 KAMLIPLPSLYHSEIEYDPFRKVFYREHPDIQAMSKEEVKAYRELSHIRVSGANAPRPVKTFAQMNLPVRLSRAIEKQGYEDPTPIQKQAVPVGLSGRDLIGIAKTGSGKTAAFMWPLLVHVDAQRGVKRGEGPIAVVVAPTRELAHQIYVEGKKFSKKLSVRLCPIYGGVSKAEQIKQLKAGVEVLVCTPGRLMDFLRMKKITSMRRVTFLVLDEADRMFDMGFEPQVRSIAGQIRPDRQSTL 732
            K  + P+P+L HS I+Y+PF K FY E P I  MS++EV  YR    IRVSG + PRPVKTF        L +AI KQ +E PTPIQ QA+P+ LSGRD+IGIAKTGSGKTAAF+ P++VH+  Q  V + EGPI V+ APTRELAHQIYVE KKF+K   VR+  +YGG+SK EQ K+LKAG EV+V TPGRL+D ++MK +T M R T+LVLDEADRMFD+GFEPQ+RSI GQIRPDRQ+ L
Sbjct:  170 KKKIEPIPALDHSSIDYEPFNKDFYEEDPSISGMSEQEVIEYRNSLAIRVSGFDVPRPVKTFKHCGFSAELMKAISKQAFEKPTPIQCQALPIALSGRDIIGIAKTGSGKTAAFVLPMVVHIMDQAEVGKDEGPIGVICAPTRELAHQIYVEAKKFAKSHGVRVAAVYGGMSKLEQFKELKAGCEVVVATPGRLIDMIKMKAVT-MLRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLL 412          
BLAST of mRNA_M-pyrifera_M_contig73380.17401.1 vs. uniprot
Match: A0A6A3C5I4_HIBSY (DEAD-box ATP-dependent RNA helicase 24 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3C5I4_HIBSY)

HSP 1 Score: 293 bits (749), Expect = 2.400e-93
Identity = 145/244 (59.43%), Postives = 184/244 (75.41%), Query Frame = 1
Query:    1 KAMLIPLPSLYHSEIEYDPFRKVFYREHPDIQAMSKEEVKAYRELSHIRVSGANAPRPVKTFAQMNLPVRLSRAIEKQGYEDPTPIQKQAVPVGLSGRDLIGIAKTGSGKTAAFMWPLLVHVDAQRGVKRGEGPIAVVVAPTRELAHQIYVEGKKFSKKLSVRLCPIYGGVSKAEQIKQLKAGVEVLVCTPGRLMDFLRMKKITSMRRVTFLVLDEADRMFDMGFEPQVRSIAGQIRPDRQSTL 732
            K  + P+P+L HS IEY+PF K FY E   I  MS++E   YR+   IRVSG + PRP+KTF +      L RAI KQ YE PTPIQ QA+ + LSGRD+IGIAKTGSGKTA+F+ P++VH+  Q  +++ EGPI V+ APTRELAHQIY+E KKF+K   +R C +YGG+SK +Q K+LKAG E++V TPGRL+D ++MK +T M R T+LVLDEADRMFD+GFEPQ+RSI GQIRPDRQ+ L
Sbjct:  172 KKKIEPIPALDHSSIEYEPFNKDFYEEKESISGMSEQEAAEYRKSLAIRVSGFDVPRPIKTFEECGFAPELLRAIAKQAYEKPTPIQCQALSIVLSGRDIIGIAKTGSGKTASFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLETKKFAKAYGLRACAVYGGMSKLDQFKELKAGCEIVVVTPGRLIDMIKMKALT-MVRTTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLL 414          
BLAST of mRNA_M-pyrifera_M_contig73380.17401.1 vs. uniprot
Match: A0A2I0B3E8_9ASPA (DEAD-box ATP-dependent RNA helicase 24 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0B3E8_9ASPA)

HSP 1 Score: 299 bits (765), Expect = 2.640e-93
Identity = 147/244 (60.25%), Postives = 188/244 (77.05%), Query Frame = 1
Query:    1 KAMLIPLPSLYHSEIEYDPFRKVFYREHPDIQAMSKEEVKAYRELSHIRVSGANAPRPVKTFAQMNLPVRLSRAIEKQGYEDPTPIQKQAVPVGLSGRDLIGIAKTGSGKTAAFMWPLLVHVDAQRGVKRGEGPIAVVVAPTRELAHQIYVEGKKFSKKLSVRLCPIYGGVSKAEQIKQLKAGVEVLVCTPGRLMDFLRMKKITSMRRVTFLVLDEADRMFDMGFEPQVRSIAGQIRPDRQSTL 732
            K  + P+P+L HSEI+Y+ F K FY E P I  MS+++V  YR+   IRVSG + P+P+K+FA       L+ AI KQGYE PT IQ QA+P+ LSGRD+IGIAKTGSGKTAAF+ P++VH+  Q  +K+ EGPI ++ APTRELAHQIY+E KKF+K   +R+  +YGG+SK EQ K+LKAG E++VCTPGRL+D L+MK +T M R T+LVLDEADRMFD+GFEPQ+RSI GQIRPDRQ+ L
Sbjct:  175 KRKIEPIPALDHSEIDYEAFSKDFYEEKPSISGMSEQDVTEYRKTLAIRVSGFDVPKPIKSFADCGFSNVLTNAIAKQGYERPTAIQCQALPIALSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELKKEEGPIGIICAPTRELAHQIYLEAKKFAKPHGIRVSAVYGGMSKHEQFKELKAGCEIVVCTPGRLIDMLKMKALT-MLRTTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLL 417          
BLAST of mRNA_M-pyrifera_M_contig73380.17401.1 vs. uniprot
Match: RH24_ORYSJ (DEAD-box ATP-dependent RNA helicase 24 n=13 Tax=Oryzeae TaxID=147380 RepID=RH24_ORYSJ)

HSP 1 Score: 299 bits (765), Expect = 3.060e-93
Identity = 148/244 (60.66%), Postives = 187/244 (76.64%), Query Frame = 1
Query:    1 KAMLIPLPSLYHSEIEYDPFRKVFYREHPDIQAMSKEEVKAYRELSHIRVSGANAPRPVKTFAQMNLPVRLSRAIEKQGYEDPTPIQKQAVPVGLSGRDLIGIAKTGSGKTAAFMWPLLVHVDAQRGVKRGEGPIAVVVAPTRELAHQIYVEGKKFSKKLSVRLCPIYGGVSKAEQIKQLKAGVEVLVCTPGRLMDFLRMKKITSMRRVTFLVLDEADRMFDMGFEPQVRSIAGQIRPDRQSTL 732
            K  + P+P L HS IEY+PF K FY E P +  MS++EV  Y +   IRVSG + PRP+K+FA    PV+L  AI KQGYE PT IQ QA+P+ LSGRD+IGIAKTGSGKTAAF+ P++VH+  Q  +++ EGPI VV APTRELAHQIY+E KKF+K  ++R+  +YGGVSK +Q K+LKAG E+++ TPGRL+D L+MK +  M R T+LVLDEADRMFD+GFEPQ+RSI GQIRPDRQ+ L
Sbjct:  160 KKKIEPIPPLDHSTIEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVVCAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEIVIATPGRLIDLLKMKAL-KMFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLL 402          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73380.17401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C9E074_OPUST1.700e-9661.89RNA helicase (Fragment) n=2 Tax=Opuntia streptacan... [more]
A0A5J5C2J5_9ASTE2.530e-9660.25Uncharacterized protein n=1 Tax=Nyssa sinensis Tax... [more]
A0A1U7V8A3_NICSY7.340e-9561.89DEAD-box ATP-dependent RNA helicase 24 isoform X2 ... [more]
A0A7J7G7C5_CAMSI1.190e-9460.25Uncharacterized protein n=1 Tax=Camellia sinensis ... [more]
UPI00090160F21.400e-9461.89DEAD-box ATP-dependent RNA helicase 24 n=2 Tax=Ipo... [more]
A0A453I8C6_AEGTS2.040e-9461.51Uncharacterized protein n=3 Tax=Triticeae TaxID=14... [more]
A0A328DDJ7_9ASTE2.140e-9461.89Uncharacterized protein n=3 Tax=Cuscuta sect. Clei... [more]
A0A6A3C5I4_HIBSY2.400e-9359.43DEAD-box ATP-dependent RNA helicase 24 n=1 Tax=Hib... [more]
A0A2I0B3E8_9ASPA2.640e-9360.25DEAD-box ATP-dependent RNA helicase 24 n=1 Tax=Apo... [more]
RH24_ORYSJ3.060e-9360.66DEAD-box ATP-dependent RNA helicase 24 n=13 Tax=Or... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73380contigM-pyrifera_M_contig73380:61..1067 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score300.1
Seed ortholog evalue9.6e-79
Seed eggNOG ortholog3847.GLYMA19G40510.1
KEGG koko:K12835
KEGG Pathwayko03040,map03040
KEGG ModuleM00352
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0031974,GO:0031981,GO:0034641,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360
EggNOG free text desc.Belongs to the DEAD box helicase family
EggNOG OGs37R3K@33090,3G7VP@35493,4JCZW@91835,COG0513@1,KOG0339@2759
EC3.6.4.13
COG Functional cat.A
Best tax levelfabids
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03041
Exons2
Model size732
Cds size726
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73380.17401.1prot_M-pyrifera_M_contig73380.17401.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig73380 61..1061 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816630.9373507-CDS-M-pyrifera_M_contig73380:60..6531622816630.9373507-CDS-M-pyrifera_M_contig73380:60..653Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73380 61..653 -
1692278087.7694361-CDS-M-pyrifera_M_contig73380:60..6531692278087.7694361-CDS-M-pyrifera_M_contig73380:60..653Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73380 61..653 -
1622816630.9522042-CDS-M-pyrifera_M_contig73380:928..10611622816630.9522042-CDS-M-pyrifera_M_contig73380:928..1061Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73380 929..1061 -
1692278087.7807229-CDS-M-pyrifera_M_contig73380:928..10611692278087.7807229-CDS-M-pyrifera_M_contig73380:928..1061Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73380 929..1061 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816630.9642298-UTR-M-pyrifera_M_contig73380:1061..10671622816630.9642298-UTR-M-pyrifera_M_contig73380:1061..1067Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig73380 1062..1067 -
1692278087.7912767-UTR-M-pyrifera_M_contig73380:1061..10671692278087.7912767-UTR-M-pyrifera_M_contig73380:1061..1067Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig73380 1062..1067 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig73380.17401.1

>prot_M-pyrifera_M_contig73380.17401.1 ID=prot_M-pyrifera_M_contig73380.17401.1|Name=mRNA_M-pyrifera_M_contig73380.17401.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=242bp
MLIPLPSLYHSEIEYDPFRKVFYREHPDIQAMSKEEVKAYRELSHIRVSG
ANAPRPVKTFAQMNLPVRLSRAIEKQGYEDPTPIQKQAVPVGLSGRDLIG
IAKTGSGKTAAFMWPLLVHVDAQRGVKRGEGPIAVVVAPTRELAHQIYVE
GKKFSKKLSVRLCPIYGGVSKAEQIKQLKAGVEVLVCTPGRLMDFLRMKK
ITSMRRVTFLVLDEADRMFDMGFEPQVRSIAGQIRPDRQSTL
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mRNA from alignment at M-pyrifera_M_contig73380:61..1067-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig73380.17401.1 ID=mRNA_M-pyrifera_M_contig73380.17401.1|Name=mRNA_M-pyrifera_M_contig73380.17401.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1007bp|location=Sequence derived from alignment at M-pyrifera_M_contig73380:61..1067- (Macrocystis pyrifera P11B4 male)
AAGGCGATGCTCATTCCCCTTCCTTCTCTCTATCACTCGGAGATCGAGTA TGATCCATTCCGCAAGGTATTCTACAGGGAGCACCCCGACATCCAGGCTA TGTCCAAGGAGGAGGTCAAGGCCTACAGAGAGCTCTCCCGTATGGACCCA TGCACGCAACTCAGAGAGAGAGCGAAAGAGCGAGAGAGCGACAGAGAGAG AGAGAGGAGGGGGGACAGAGACAGAGAGAGGGACAGAGACAGAGACAGAG GAGGGAGAGATGGGGAGAGGGAGGTGTAAGTGAGGGAAAGAGTGTGGGAG AGGAAGCCAAACTGAGACTGGGGTGAGCTTGAGAAACAGCAAAGTTCCAG GCACAAACAGAGTTTGAGGGTGGAGCGGCAAGGATGGAAACGATGGAGGG CTGACCGTGGGTAGACATCCGTGTGTCTGGTGCCAATGCGCCGCGACCGG TGAAGACCTTTGCCCAAATGAATCTTCCGGTGCGTCTGAGCAGGGCCATC GAGAAGCAAGGCTACGAGGACCCCACGCCGATCCAGAAGCAGGCGGTGCC GGTCGGCCTCAGCGGGAGAGACCTGATTGGCATTGCCAAGACGGGCAGCG GCAAGACGGCGGCCTTCATGTGGCCCCTCTTGGTGCATGTGGACGCCCAG CGAGGCGTGAAGCGAGGAGAGGGCCCCATTGCTGTGGTGGTGGCACCCAC GCGCGAGCTGGCGCACCAGATCTACGTGGAGGGCAAGAAGTTCAGCAAGA AGCTCTCGGTGCGCCTCTGCCCCATCTACGGCGGTGTCTCGAAGGCAGAG CAGATCAAGCAGCTCAAGGCTGGCGTCGAGGTGCTCGTCTGCACGCCAGG CCGACTCATGGACTTCCTGCGCATGAAGAAGATCACCAGCATGCGCAGGG TCACCTTCCTCGTACTCGACGAGGCAGACCGCATGTTCGACATGGGCTTC GAGCCCCAAGTGCGCTCGATTGCTGGCCAAATCCGACCTGACAGGCAGAG TACTCTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig73380:61..1067-

>mRNA_M-pyrifera_M_contig73380.17401.1 ID=mRNA_M-pyrifera_M_contig73380.17401.1|Name=mRNA_M-pyrifera_M_contig73380.17401.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1452bp|location=Sequence derived from alignment at M-pyrifera_M_contig73380:61..1067- (Macrocystis pyrifera P11B4 male)
ATGCTCATTCCCCTTCCTTCTCTCTATCACTCGGAGATCGAGTATGATCC
ATTCCGCAAGGTATTCTACAGGGAGCACCCCGACATCCAGGCTATGTCCA
AGGAGGAGGTCAAGGCCTACAGAGAGCTCTCCCATGCTCATTCCCCTTCC
TTCTCTCTATCACTCGGAGATCGAGTATGATCCATTCCGCAAGGTATTCT
ACAGGGAGCACCCCGACATCCAGGCTATGTCCAAGGAGGAGGTCAAGGCC
TACAGAGAGCTCTCCCACATCCGTGTGTCTGGTGCCAATGCGCCGCGACC
GGTGAAGACCTTTGCCCAAATGAATCTTCCGGTGCGTCTGAGCAGGGCCA
TCGAGAAGCAAGGCTACGAGGACCCCACGCCGATCCAGAAGCAGGCGGTG
CCGGTCGGCCTCAGCGGGAGAGACCTGATTGGCATTGCCAAGACGGGCAG
CGGCAAGACGGCGGCCTTCATGTGGCCCCTCTTGGTGCATGTGGACGCCC
AGCGAGGCGTGAAGCGAGGAGAGGGCCCCATTGCTGTGGTGGTGGCACCC
ACGCGCGAGCTGGCGCACCAGATCTACGTGGAGGGCAAGAAGTTCAGCAA
GAAGCTCTCGGTGCGCCTCTGCCCCATCTACGGCGGTGTCTCGAAGGCAG
AGCAGATCAAGCAGCTCAAGGCTGGCGTCGAGGTGCTCGTCTGCACGCCA
GGCCGACTCATGGACTTCCTGCGCATGAAGAAGATCACCAGCATGCGCAG
GGTCACCTTCCTCGTACTCGACGAGGCAGACCGCATGTTCGACATGGGCT
TCGAGCCCCAAGTGCGCTCGATTGCTGGCCAAATCCGACCTGACAGGCAG
AGTACTCTCACATCCGTGTGTCTGGTGCCAATGCGCCGCGACCGGTGAAG
ACCTTTGCCCAAATGAATCTTCCGGTGCGTCTGAGCAGGGCCATCGAGAA
GCAAGGCTACGAGGACCCCACGCCGATCCAGAAGCAGGCGGTGCCGGTCG
GCCTCAGCGGGAGAGACCTGATTGGCATTGCCAAGACGGGCAGCGGCAAG
ACGGCGGCCTTCATGTGGCCCCTCTTGGTGCATGTGGACGCCCAGCGAGG
CGTGAAGCGAGGAGAGGGCCCCATTGCTGTGGTGGTGGCACCCACGCGCG
AGCTGGCGCACCAGATCTACGTGGAGGGCAAGAAGTTCAGCAAGAAGCTC
TCGGTGCGCCTCTGCCCCATCTACGGCGGTGTCTCGAAGGCAGAGCAGAT
CAAGCAGCTCAAGGCTGGCGTCGAGGTGCTCGTCTGCACGCCAGGCCGAC
TCATGGACTTCCTGCGCATGAAGAAGATCACCAGCATGCGCAGGGTCACC
TTCCTCGTACTCGACGAGGCAGACCGCATGTTCGACATGGGCTTCGAGCC
CCAAGTGCGCTCGATTGCTGGCCAAATCCGACCTGACAGGCAGAGTACTC
TC
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