mRNA_M-pyrifera_M_contig73380.17401.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig73380.17401.1 vs. uniprot
Match: A0A7C9E074_OPUST (RNA helicase (Fragment) n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9E074_OPUST) HSP 1 Score: 303 bits (777), Expect = 1.700e-96 Identity = 151/244 (61.89%), Postives = 189/244 (77.46%), Query Frame = 1 Query: 1 KAMLIPLPSLYHSEIEYDPFRKVFYREHPDIQAMSKEEVKAYRELSHIRVSGANAPRPVKTFAQMNLPVRLSRAIEKQGYEDPTPIQKQAVPVGLSGRDLIGIAKTGSGKTAAFMWPLLVHVDAQRGVKRGEGPIAVVVAPTRELAHQIYVEGKKFSKKLSVRLCPIYGGVSKAEQIKQLKAGVEVLVCTPGRLMDFLRMKKITSMRRVTFLVLDEADRMFDMGFEPQVRSIAGQIRPDRQSTL 732 K + P+P+L HSEI+Y+ F K FY E P I MS++EV YR+ +IR+SG + PRPVKTF P L AI+KQGYE PT IQ QA+P+ LSGRD+IGIAKTGSGKTAAF+ P++VHV Q + +G+GPI V+ APTRELAHQIY+E +KF+K VR+ +YGG+SK EQ K+LKAG E++V TPGRL+D L+MK +T MRR T+LVLDEADRMFD+GFEPQ+RSI GQIRPDRQ+ L Sbjct: 171 KKKIEPIPALDHSEIDYESFNKDFYEERPSISGMSEQEVIEYRKSLNIRISGFDVPRPVKTFEDCGFPSPLMSAIKKQGYEKPTNIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHVMDQPELDKGDGPIGVICAPTRELAHQIYLEARKFAKPYGVRISAVYGGMSKLEQFKELKAGSEIVVATPGRLIDLLKMKALT-MRRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLL 413
BLAST of mRNA_M-pyrifera_M_contig73380.17401.1 vs. uniprot
Match: A0A5J5C2J5_9ASTE (Uncharacterized protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5C2J5_9ASTE) HSP 1 Score: 299 bits (765), Expect = 2.530e-96 Identity = 147/244 (60.25%), Postives = 187/244 (76.64%), Query Frame = 1 Query: 1 KAMLIPLPSLYHSEIEYDPFRKVFYREHPDIQAMSKEEVKAYRELSHIRVSGANAPRPVKTFAQMNLPVRLSRAIEKQGYEDPTPIQKQAVPVGLSGRDLIGIAKTGSGKTAAFMWPLLVHVDAQRGVKRGEGPIAVVVAPTRELAHQIYVEGKKFSKKLSVRLCPIYGGVSKAEQIKQLKAGVEVLVCTPGRLMDFLRMKKITSMRRVTFLVLDEADRMFDMGFEPQVRSIAGQIRPDRQSTL 732 K + P+P+L HS IEY+PF K FY E P I MS+++V Y++ IRVSG + PRP+KTF + L +AI KQ YE PTPIQ QA+P+ LSGRD+IGIAKTGSGKTAAFM P++VH+ Q +++ EGPI V+ APTRELAHQIY+E KKF+K +R+ +YGG+SK +Q K+LKAG E++V TPGRL+D L+MK +T M R T+LVLDEADRMFD+GFEPQ+RSI GQIRPDRQ+ L Sbjct: 167 KKKIEPIPALDHSLIEYEPFNKDFYEEQPSISGMSEQDVGEYQKSLAIRVSGFDVPRPIKTFEDSGFSLELMKAISKQAYEKPTPIQCQALPIVLSGRDIIGIAKTGSGKTAAFMLPVIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLEAKKFAKSHGIRVAAVYGGMSKLDQFKELKAGCEIVVATPGRLIDMLKMKALT-MLRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLL 409
BLAST of mRNA_M-pyrifera_M_contig73380.17401.1 vs. uniprot
Match: A0A1U7V8A3_NICSY (DEAD-box ATP-dependent RNA helicase 24 isoform X2 n=3 Tax=Solanaceae TaxID=4070 RepID=A0A1U7V8A3_NICSY) HSP 1 Score: 300 bits (767), Expect = 7.340e-95 Identity = 151/244 (61.89%), Postives = 184/244 (75.41%), Query Frame = 1 Query: 1 KAMLIPLPSLYHSEIEYDPFRKVFYREHPDIQAMSKEEVKAYRELSHIRVSGANAPRPVKTFAQMNLPVRLSRAIEKQGYEDPTPIQKQAVPVGLSGRDLIGIAKTGSGKTAAFMWPLLVHVDAQRGVKRGEGPIAVVVAPTRELAHQIYVEGKKFSKKLSVRLCPIYGGVSKAEQIKQLKAGVEVLVCTPGRLMDFLRMKKITSMRRVTFLVLDEADRMFDMGFEPQVRSIAGQIRPDRQSTL 732 K + P+P+L HSEI+Y+ F K FY E P I MS EV YR IRVSG + PRPVKTF V L +AI KQGYE PTPIQ QA+P+ LSGRD+IGIAKTGSGKTAAF+ P++VH+ Q +++ EGPI V+ APTRELAHQI+VE KKFSK +R+ +YGG+SK +Q K+LKAG E++V TPGRL+D LR KK +M R T+LVLDEADRMFD+GFEPQ+RSI GQIRPDRQ+ L Sbjct: 173 KKKIEPIPALEHSEIDYEAFNKDFYEEKPSISGMSDPEVNEYRSSLAIRVSGFDVPRPVKTFEDCGFSVELMKAISKQGYEKPTPIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMVVHIMDQPELQKEEGPIGVICAPTRELAHQIFVEAKKFSKSHGIRVSAVYGGMSKLDQYKELKAGCEIVVATPGRLIDMLR-KKAFTMLRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLL 415
BLAST of mRNA_M-pyrifera_M_contig73380.17401.1 vs. uniprot
Match: A0A7J7G7C5_CAMSI (Uncharacterized protein n=1 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7G7C5_CAMSI) HSP 1 Score: 296 bits (758), Expect = 1.190e-94 Identity = 147/244 (60.25%), Postives = 186/244 (76.23%), Query Frame = 1 Query: 1 KAMLIPLPSLYHSEIEYDPFRKVFYREHPDIQAMSKEEVKAYRELSHIRVSGANAPRPVKTFAQMNLPVRLSRAIEKQGYEDPTPIQKQAVPVGLSGRDLIGIAKTGSGKTAAFMWPLLVHVDAQRGVKRGEGPIAVVVAPTRELAHQIYVEGKKFSKKLSVRLCPIYGGVSKAEQIKQLKAGVEVLVCTPGRLMDFLRMKKITSMRRVTFLVLDEADRMFDMGFEPQVRSIAGQIRPDRQSTL 732 K + P+P+L HS IEY+P K FY E P I MS+++V YR IRVSG + PRP+KTF + V L +AI KQ YE PTPIQ QA+P+ LSGRD+IGIAKTGSGKTAAF+ P++VH+ Q +++ EGPI V+ APTRELAHQIY+E KKF+K +R+ +YGG+SK EQ K+LKAG E++V TPGRL+D L+MK +T M R ++LVLDEADRMFD+GFEPQ+RSI GQIRPDRQ+ L Sbjct: 167 KNKIEPIPALDHSSIEYEPINKDFYEETPSISGMSEQDVVEYRNSLAIRVSGFDVPRPIKTFEEGGFSVELMKAIAKQAYEKPTPIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVICAPTRELAHQIYLEAKKFAKSHGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALT-MFRASYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLL 409
BLAST of mRNA_M-pyrifera_M_contig73380.17401.1 vs. uniprot
Match: UPI00090160F2 (DEAD-box ATP-dependent RNA helicase 24 n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00090160F2) HSP 1 Score: 302 bits (774), Expect = 1.400e-94 Identity = 151/244 (61.89%), Postives = 186/244 (76.23%), Query Frame = 1 Query: 1 KAMLIPLPSLYHSEIEYDPFRKVFYREHPDIQAMSKEEVKAYRELSHIRVSGANAPRPVKTFAQMNLPVRLSRAIEKQGYEDPTPIQKQAVPVGLSGRDLIGIAKTGSGKTAAFMWPLLVHVDAQRGVKRGEGPIAVVVAPTRELAHQIYVEGKKFSKKLSVRLCPIYGGVSKAEQIKQLKAGVEVLVCTPGRLMDFLRMKKITSMRRVTFLVLDEADRMFDMGFEPQVRSIAGQIRPDRQSTL 732 K + P+P+L HS I+Y+PF K FY E+P I MS+++V YR IRVSG + PRPVKTF V L +AI KQ YE PTPIQ QA+P+ LSG D+IGIAKTGSGKTAAF+ PL+VH+ Q +++ EGPI V+ APTRELAHQIYVE KKF+K +R+ +YGG+SK EQ K+LKAG E++V TPGRL+D LRMK +T M R T+LVLDEADRMFD+GFEPQ+RSI GQIRPDRQ+ L Sbjct: 171 KKKIEPIPALDHSSIDYEPFNKDFYEENPSISGMSEQDVIEYRNSLAIRVSGFDVPRPVKTFEDCGFSVELLKAISKQAYEKPTPIQCQALPIALSGGDIIGIAKTGSGKTAAFVLPLMVHIMDQPELEKEEGPIGVICAPTRELAHQIYVETKKFAKSHGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLRMKAVT-MTRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLL 413
BLAST of mRNA_M-pyrifera_M_contig73380.17401.1 vs. uniprot
Match: A0A453I8C6_AEGTS (Uncharacterized protein n=3 Tax=Triticeae TaxID=147389 RepID=A0A453I8C6_AEGTS) HSP 1 Score: 293 bits (749), Expect = 2.040e-94 Identity = 147/239 (61.51%), Postives = 181/239 (75.73%), Query Frame = 1 Query: 16 PLPSLYHSEIEYDPFRKVFYREHPDIQAMSKEEVKAYRELSHIRVSGANAPRPVKTFAQMNLPVRLSRAIEKQGYEDPTPIQKQAVPVGLSGRDLIGIAKTGSGKTAAFMWPLLVHVDAQRGVKRGEGPIAVVVAPTRELAHQIYVEGKKFSKKLSVRLCPIYGGVSKAEQIKQLKAGVEVLVCTPGRLMDFLRMKKITSMRRVTFLVLDEADRMFDMGFEPQVRSIAGQIRPDRQSTL 732 P+P L HS IEY+PF K FY E P + MS EEV Y + IRVSG + PRPVK F PV L AI KQGYE PT IQ QA+P+ LSGRD+IGIAKTGSGKTAAF+ P++VH+ Q +++ EGPI V+ APTRELAHQIY+E KKF+K ++++ +YGGVSK EQ K+LK+G E++V TPGRL+D L+MK + M R T+LVLDEADRMFD+GFEPQ+RSI GQIRPDRQ+ L Sbjct: 4 PIPPLDHSTIEYEPFTKDFYEEKPSVSGMSVEEVADYMKSLAIRVSGFDVPRPVKNFEDCGFPVPLMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLEAKKFAKPYNLQVAAVYGGVSKFEQFKELKSGCEIVVATPGRLIDLLKMKAL-KMFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLL 241
BLAST of mRNA_M-pyrifera_M_contig73380.17401.1 vs. uniprot
Match: A0A328DDJ7_9ASTE (Uncharacterized protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328DDJ7_9ASTE) HSP 1 Score: 302 bits (773), Expect = 2.140e-94 Identity = 151/244 (61.89%), Postives = 184/244 (75.41%), Query Frame = 1 Query: 1 KAMLIPLPSLYHSEIEYDPFRKVFYREHPDIQAMSKEEVKAYRELSHIRVSGANAPRPVKTFAQMNLPVRLSRAIEKQGYEDPTPIQKQAVPVGLSGRDLIGIAKTGSGKTAAFMWPLLVHVDAQRGVKRGEGPIAVVVAPTRELAHQIYVEGKKFSKKLSVRLCPIYGGVSKAEQIKQLKAGVEVLVCTPGRLMDFLRMKKITSMRRVTFLVLDEADRMFDMGFEPQVRSIAGQIRPDRQSTL 732 K + P+P+L HS I+Y+PF K FY E P I MS++EV YR IRVSG + PRPVKTF L +AI KQ +E PTPIQ QA+P+ LSGRD+IGIAKTGSGKTAAF+ P++VH+ Q V + EGPI V+ APTRELAHQIYVE KKF+K VR+ +YGG+SK EQ K+LKAG EV+V TPGRL+D ++MK +T M R T+LVLDEADRMFD+GFEPQ+RSI GQIRPDRQ+ L Sbjct: 170 KKKIEPIPALDHSSIDYEPFNKDFYEEDPSISGMSEQEVIEYRNSLAIRVSGFDVPRPVKTFKHCGFSAELMKAISKQAFEKPTPIQCQALPIALSGRDIIGIAKTGSGKTAAFVLPMVVHIMDQAEVGKDEGPIGVICAPTRELAHQIYVEAKKFAKSHGVRVAAVYGGMSKLEQFKELKAGCEVVVATPGRLIDMIKMKAVT-MLRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLL 412
BLAST of mRNA_M-pyrifera_M_contig73380.17401.1 vs. uniprot
Match: A0A6A3C5I4_HIBSY (DEAD-box ATP-dependent RNA helicase 24 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3C5I4_HIBSY) HSP 1 Score: 293 bits (749), Expect = 2.400e-93 Identity = 145/244 (59.43%), Postives = 184/244 (75.41%), Query Frame = 1 Query: 1 KAMLIPLPSLYHSEIEYDPFRKVFYREHPDIQAMSKEEVKAYRELSHIRVSGANAPRPVKTFAQMNLPVRLSRAIEKQGYEDPTPIQKQAVPVGLSGRDLIGIAKTGSGKTAAFMWPLLVHVDAQRGVKRGEGPIAVVVAPTRELAHQIYVEGKKFSKKLSVRLCPIYGGVSKAEQIKQLKAGVEVLVCTPGRLMDFLRMKKITSMRRVTFLVLDEADRMFDMGFEPQVRSIAGQIRPDRQSTL 732 K + P+P+L HS IEY+PF K FY E I MS++E YR+ IRVSG + PRP+KTF + L RAI KQ YE PTPIQ QA+ + LSGRD+IGIAKTGSGKTA+F+ P++VH+ Q +++ EGPI V+ APTRELAHQIY+E KKF+K +R C +YGG+SK +Q K+LKAG E++V TPGRL+D ++MK +T M R T+LVLDEADRMFD+GFEPQ+RSI GQIRPDRQ+ L Sbjct: 172 KKKIEPIPALDHSSIEYEPFNKDFYEEKESISGMSEQEAAEYRKSLAIRVSGFDVPRPIKTFEECGFAPELLRAIAKQAYEKPTPIQCQALSIVLSGRDIIGIAKTGSGKTASFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLETKKFAKAYGLRACAVYGGMSKLDQFKELKAGCEIVVVTPGRLIDMIKMKALT-MVRTTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLL 414
BLAST of mRNA_M-pyrifera_M_contig73380.17401.1 vs. uniprot
Match: A0A2I0B3E8_9ASPA (DEAD-box ATP-dependent RNA helicase 24 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0B3E8_9ASPA) HSP 1 Score: 299 bits (765), Expect = 2.640e-93 Identity = 147/244 (60.25%), Postives = 188/244 (77.05%), Query Frame = 1 Query: 1 KAMLIPLPSLYHSEIEYDPFRKVFYREHPDIQAMSKEEVKAYRELSHIRVSGANAPRPVKTFAQMNLPVRLSRAIEKQGYEDPTPIQKQAVPVGLSGRDLIGIAKTGSGKTAAFMWPLLVHVDAQRGVKRGEGPIAVVVAPTRELAHQIYVEGKKFSKKLSVRLCPIYGGVSKAEQIKQLKAGVEVLVCTPGRLMDFLRMKKITSMRRVTFLVLDEADRMFDMGFEPQVRSIAGQIRPDRQSTL 732 K + P+P+L HSEI+Y+ F K FY E P I MS+++V YR+ IRVSG + P+P+K+FA L+ AI KQGYE PT IQ QA+P+ LSGRD+IGIAKTGSGKTAAF+ P++VH+ Q +K+ EGPI ++ APTRELAHQIY+E KKF+K +R+ +YGG+SK EQ K+LKAG E++VCTPGRL+D L+MK +T M R T+LVLDEADRMFD+GFEPQ+RSI GQIRPDRQ+ L Sbjct: 175 KRKIEPIPALDHSEIDYEAFSKDFYEEKPSISGMSEQDVTEYRKTLAIRVSGFDVPKPIKSFADCGFSNVLTNAIAKQGYERPTAIQCQALPIALSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELKKEEGPIGIICAPTRELAHQIYLEAKKFAKPHGIRVSAVYGGMSKHEQFKELKAGCEIVVCTPGRLIDMLKMKALT-MLRTTYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLL 417
BLAST of mRNA_M-pyrifera_M_contig73380.17401.1 vs. uniprot
Match: RH24_ORYSJ (DEAD-box ATP-dependent RNA helicase 24 n=13 Tax=Oryzeae TaxID=147380 RepID=RH24_ORYSJ) HSP 1 Score: 299 bits (765), Expect = 3.060e-93 Identity = 148/244 (60.66%), Postives = 187/244 (76.64%), Query Frame = 1 Query: 1 KAMLIPLPSLYHSEIEYDPFRKVFYREHPDIQAMSKEEVKAYRELSHIRVSGANAPRPVKTFAQMNLPVRLSRAIEKQGYEDPTPIQKQAVPVGLSGRDLIGIAKTGSGKTAAFMWPLLVHVDAQRGVKRGEGPIAVVVAPTRELAHQIYVEGKKFSKKLSVRLCPIYGGVSKAEQIKQLKAGVEVLVCTPGRLMDFLRMKKITSMRRVTFLVLDEADRMFDMGFEPQVRSIAGQIRPDRQSTL 732 K + P+P L HS IEY+PF K FY E P + MS++EV Y + IRVSG + PRP+K+FA PV+L AI KQGYE PT IQ QA+P+ LSGRD+IGIAKTGSGKTAAF+ P++VH+ Q +++ EGPI VV APTRELAHQIY+E KKF+K ++R+ +YGGVSK +Q K+LKAG E+++ TPGRL+D L+MK + M R T+LVLDEADRMFD+GFEPQ+RSI GQIRPDRQ+ L Sbjct: 160 KKKIEPIPPLDHSTIEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVVCAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEIVIATPGRLIDLLKMKAL-KMFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLL 402 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73380.17401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig73380.17401.1 >prot_M-pyrifera_M_contig73380.17401.1 ID=prot_M-pyrifera_M_contig73380.17401.1|Name=mRNA_M-pyrifera_M_contig73380.17401.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=242bp MLIPLPSLYHSEIEYDPFRKVFYREHPDIQAMSKEEVKAYRELSHIRVSGback to top mRNA from alignment at M-pyrifera_M_contig73380:61..1067- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig73380.17401.1 ID=mRNA_M-pyrifera_M_contig73380.17401.1|Name=mRNA_M-pyrifera_M_contig73380.17401.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1007bp|location=Sequence derived from alignment at M-pyrifera_M_contig73380:61..1067- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig73380:61..1067- >mRNA_M-pyrifera_M_contig73380.17401.1 ID=mRNA_M-pyrifera_M_contig73380.17401.1|Name=mRNA_M-pyrifera_M_contig73380.17401.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1452bp|location=Sequence derived from alignment at M-pyrifera_M_contig73380:61..1067- (Macrocystis pyrifera P11B4 male)back to top |