mRNA_M-pyrifera_M_contig73223.17373.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig73223.17373.1
Unique NamemRNA_M-pyrifera_M_contig73223.17373.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig73223.17373.1 vs. uniprot
Match: A0A7S1SGC3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SGC3_9CHLO)

HSP 1 Score: 306 bits (783), Expect = 3.750e-101
Identity = 153/217 (70.51%), Postives = 180/217 (82.95%), Query Frame = 1
Query:   25 RKPKVAKGARDFGPEQMAIRSKAFAVIRDVFRRHGAVEIDTPVFELRETLTGKYGEEGGKLIYDLADQGGELLSLRYDLTVPFARYVALHSIKAMRRFHIAKVYRRDQPQIERGRFREFYQCDFDVAGAYASAPMLPDAEVVSVACEILGSLAVGKFCLKLSHRGLLDGMLSVAGVSGAKFQTVCSSIDKLDKEPWEAVREELVEQKGIADAVADRI 675
            RKPK+AKG RDF P+QM IR +AFA I  VF+RHGAV IDTPVFELRETL GKYGE+  KLIYDLADQGGE LSLRYDLTVPFARY ALH +  ++R+HIA+VYRRDQPQ+ RGRFREF+QCDFD+AGAYA+  M+PDAEV+ V  EIL  LA+G F +KL+HRGLLD M+ +AGV  +KF+ +CS+IDKLDKEPWE VR E+VE KG+   VADRI
Sbjct:   49 RKPKIAKGTRDFMPDQMTIREQAFAKIVSVFKRHGAVAIDTPVFELRETLMGKYGEDS-KLIYDLADQGGENLSLRYDLTVPFARYTALHGMGNIKRYHIARVYRRDQPQMNRGRFREFFQCDFDIAGAYAA--MVPDAEVLKVLVEILSDLALGDFEIKLNHRGLLDTMMDIAGVPTSKFRPICSAIDKLDKEPWEEVRREMVEDKGLPGPVADRI 262          
BLAST of mRNA_M-pyrifera_M_contig73223.17373.1 vs. uniprot
Match: D8U6R9_VOLCA (Histidine--tRNA ligase n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U6R9_VOLCA)

HSP 1 Score: 307 bits (787), Expect = 2.440e-100
Identity = 152/217 (70.05%), Postives = 182/217 (83.87%), Query Frame = 1
Query:   25 RKPKVAKGARDFGPEQMAIRSKAFAVIRDVFRRHGAVEIDTPVFELRETLTGKYGEEGGKLIYDLADQGGELLSLRYDLTVPFARYVALHSIKAMRRFHIAKVYRRDQPQIERGRFREFYQCDFDVAGAYASAPMLPDAEVVSVACEILGSLAVGKFCLKLSHRGLLDGMLSVAGVSGAKFQTVCSSIDKLDKEPWEAVREELVEQKGIADAVADRI 675
            RKPK+ KG RDF PEQMAIR KAFA+I  VF++HGAV IDTPVFELRETL GKYGE+  KLIYDLADQGGE+LSLRYDLTVPFAR+VA+HSI  ++R+HI KVYRRDQPQ+ RGRFREF+QCDFD+AGAYA  PM+ DAE++ V  EIL  L +GKF +K++HRGLLD ML++AGV   KF+ +CS+IDKLDKEPWE VR+E+V  KG+ + VAD I
Sbjct:   16 RKPKIPKGTRDFLPEQMAIREKAFAIIVSVFKKHGAVAIDTPVFELRETLMGKYGEDS-KLIYDLADQGGEILSLRYDLTVPFARFVAVHSIGNIKRYHIGKVYRRDQPQMTRGRFREFFQCDFDIAGAYA--PMVADAEIIKVLTEILTDLQLGKFEVKINHRGLLDAMLAIAGVPPQKFRPICSAIDKLDKEPWEIVRQEMVVDKGLPEEVADAI 229          
BLAST of mRNA_M-pyrifera_M_contig73223.17373.1 vs. uniprot
Match: A0A813A3Z6_9DINO (HARS1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A3Z6_9DINO)

HSP 1 Score: 314 bits (804), Expect = 1.400e-99
Identity = 153/218 (70.18%), Postives = 181/218 (83.03%), Query Frame = 1
Query:   22 GRKPKVAKGARDFGPEQMAIRSKAFAVIRDVFRRHGAVEIDTPVFELRETLTGKYGEEGGKLIYDLADQGGELLSLRYDLTVPFARYVALHSIKAMRRFHIAKVYRRDQPQIERGRFREFYQCDFDVAGAYASAPMLPDAEVVSVACEILGSLAVGKFCLKLSHRGLLDGMLSVAGVSGAKFQTVCSSIDKLDKEPWEAVREELVEQKGIADAVADRI 675
            G   K+AKG RD+GP++M +R   FA IR VF+RHGAVEIDTPVFE R+TLTGKYGEEG KLIY LADQGG+LLSLRYDLTVPFAR+VA H +  ++RFHIA+VYRRDQPQ+ RGR+REFYQCDFD+AG++A   M+PDAEV+SVACEILGSL +G F  KL+HRG+LDG L +AGV   K +TVCSSIDKLDKEPW  VREELV +KG++  VAD I
Sbjct:   13 GADAKIAKGTRDYGPQEMRVREPVFAAIRSVFKRHGAVEIDTPVFEHRDTLTGKYGEEGAKLIYHLADQGGQLLSLRYDLTVPFARFVASHGLDKIKRFHIARVYRRDQPQMTRGRYREFYQCDFDIAGSHAL--MVPDAEVISVACEILGSLPIGDFQFKLNHRGVLDGCLELAGVPSGKVRTVCSSIDKLDKEPWADVREELVGEKGVSPDVADAI 228          
BLAST of mRNA_M-pyrifera_M_contig73223.17373.1 vs. uniprot
Match: A0A812LA96_9DINO (Histidine--tRNA ligase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812LA96_9DINO)

HSP 1 Score: 305 bits (781), Expect = 3.440e-99
Identity = 148/201 (73.63%), Postives = 172/201 (85.57%), Query Frame = 1
Query:   73 MAIRSKAFAVIRDVFRRHGAVEIDTPVFELRETLTGKYGEEGGKLIYDLADQGGELLSLRYDLTVPFARYVALHSIKAMRRFHIAKVYRRDQPQIERGRFREFYQCDFDVAGAYASAPMLPDAEVVSVACEILGSLAVGKFCLKLSHRGLLDGMLSVAGVSGAKFQTVCSSIDKLDKEPWEAVREELVEQKGIADAVADRI 675
            MA+R +AF  IR VF+RHGA EIDTPVFELRETL GKYGEEGGKLIYDLADQGGELLSLRYDLTVPFARY A H + +M+RFHI+KVYRRD   I RGR+REFYQCD+DVAG YA+  M+PDAEV++VAC+IL SL +G F +K +HRGLLDGML +AGV  AKF+T+CSSIDKLDKEPW +VREE+V +KG+  AVADRI
Sbjct:    1 MAVRERAFTTIRSVFKRHGAAEIDTPVFELRETLLGKYGEEGGKLIYDLADQGGELLSLRYDLTVPFARYCAQHGVASMKRFHISKVYRRDNVNISRGRYREFYQCDYDVAGTYAA--MMPDAEVLAVACDILRSLPIGPFTVKFNHRGLLDGMLELAGVPPAKFRTICSSIDKLDKEPWTSVREEMVAEKGLEGAVADRI 199          
BLAST of mRNA_M-pyrifera_M_contig73223.17373.1 vs. uniprot
Match: B8CDX2_THAPS (Histidine--tRNA ligase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDX2_THAPS)

HSP 1 Score: 303 bits (777), Expect = 1.060e-98
Identity = 147/217 (67.74%), Postives = 181/217 (83.41%), Query Frame = 1
Query:   25 RKPKVAKGARDFGPEQMAIRSKAFAVIRDVFRRHGAVEIDTPVFELRETLTGKYGEEGGKLIYDLADQGGELLSLRYDLTVPFARYVALHSIKAMRRFHIAKVYRRDQPQIERGRFREFYQCDFDVAGAYASAPMLPDAEVVSVACEILGSLAVGKFCLKLSHRGLLDGMLSVAGVSGAKFQTVCSSIDKLDKEPWEAVREELVEQKGIADAVADRI 675
            R+PKVAKG RD+ PEQM+IR KAF +IR VF+RHGAVEIDTPVFEL+ETLTGKYGE+  KLIYDLADQGGELL+LRYDLTVPFAR++A++++  ++RFHI KVYRRDQP + RGR+REFYQCDFD+AG Y    M+PD+E ++VACEIL SL +G F +KL+HR LLD +L + GV   KF+T+CS++DKLDKEPW  VR E+VE KG+   VADRI
Sbjct:    3 RRPKVAKGTRDYLPEQMSIRDKAFTIIRRVFKRHGAVEIDTPVFELKETLTGKYGEDS-KLIYDLADQGGELLALRYDLTVPFARFLAVNAVGNIKRFHIGKVYRRDQPALSRGRYREFYQCDFDIAGVYGR--MVPDSECLAVACEILDSLPIGDFGIKLNHRRLLDAILDLCGVPADKFRTICSAVDKLDKEPWSEVRREMVEDKGLTGDVADRI 216          
BLAST of mRNA_M-pyrifera_M_contig73223.17373.1 vs. uniprot
Match: A0A7J7QLS0_9CHLO (Histidine--tRNA ligase n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QLS0_9CHLO)

HSP 1 Score: 307 bits (786), Expect = 1.310e-98
Identity = 155/217 (71.43%), Postives = 182/217 (83.87%), Query Frame = 1
Query:   25 RKPKVAKGARDFGPEQMAIRSKAFAVIRDVFRRHGAVEIDTPVFELRETLTGKYGEEGGKLIYDLADQGGELLSLRYDLTVPFARYVALHSIKAMRRFHIAKVYRRDQPQIERGRFREFYQCDFDVAGAYASAPMLPDAEVVSVACEILGSLAVGKFCLKLSHRGLLDGMLSVAGVSGAKFQTVCSSIDKLDKEPWEAVREELVEQKGIADAVADRI 675
            RKPKVAKGARDF P+QMAIR  AF  I  VF+RHGAV IDTPVFELRETL GKYGE+  KLIYDLADQGGELLSLRYDLTVPFARYVA+++I  ++R+HI KVYRRDQPQ+ RGRFREF+QCDFD+AG+YA+  M+PDAEV+SV  EIL  L +GKF +KL+HR LLD ML++AGV   KF+ +CS+IDKLDKEPWE VR E+VE+KG+   VAD I
Sbjct:  134 RKPKVAKGARDFLPDQMAIREAAFGTITSVFKRHGAVAIDTPVFELRETLMGKYGEDS-KLIYDLADQGGELLSLRYDLTVPFARYVAVNAIGNIKRYHIGKVYRRDQPQLNRGRFREFFQCDFDIAGSYAA--MVPDAEVLSVLVEILRDLQLGKFTVKLNHRRLLDAMLAIAGVPPQKFRPICSAIDKLDKEPWEVVRAEMVEEKGLPGDVADTI 347          
BLAST of mRNA_M-pyrifera_M_contig73223.17373.1 vs. uniprot
Match: A0A061R9E0_9CHLO (Histidine--tRNA ligase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R9E0_9CHLO)

HSP 1 Score: 302 bits (773), Expect = 1.390e-97
Identity = 149/224 (66.52%), Postives = 179/224 (79.91%), Query Frame = 1
Query:    4 LMTEDVGRKPKVAKGARDFGPEQMAIRSKAFAVIRDVFRRHGAVEIDTPVFELRETLTGKYGEEGGKLIYDLADQGGELLSLRYDLTVPFARYVALHSIKAMRRFHIAKVYRRDQPQIERGRFREFYQCDFDVAGAYASAPMLPDAEVVSVACEILGSLAVGKFCLKLSHRGLLDGMLSVAGVSGAKFQTVCSSIDKLDKEPWEAVREELVEQKGIADAVADRI 675
            +      RKPK+ KG RDF P+QM IR KAFA I  VF+RHGAV IDTPVFELRETL GKYGE+  KLIYDLADQGGE+LSLRYDLTVPFARY ALH +  ++R+HIA+VYRRDQPQ+ RGRFREF+QCDFD+AG Y +  M+PDAEV+ V  EIL  L +G F +KL+HRG+LD ++ +AGV  +KF+T+CS+IDKLDKEPWEAVR E+ E KG+   VADRI
Sbjct:   44 IEANQASRKPKIPKGTRDFMPDQMTIREKAFAKIVGVFKRHGAVAIDTPVFELRETLMGKYGEDS-KLIYDLADQGGEILSLRYDLTVPFARYTALHGMGNIKRYHIARVYRRDQPQMTRGRFREFFQCDFDIAGQYXA--MVPDAEVIKVLTEILSDLDLGDFEIKLNHRGILDTVMDIAGVPPSKFRTICSAIDKLDKEPWEAVRREMTEDKGLPGDVADRI 264          
BLAST of mRNA_M-pyrifera_M_contig73223.17373.1 vs. uniprot
Match: A0A150FY79_GONPE (Histidine--tRNA ligase n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150FY79_GONPE)

HSP 1 Score: 313 bits (802), Expect = 2.230e-97
Identity = 153/217 (70.51%), Postives = 184/217 (84.79%), Query Frame = 1
Query:   25 RKPKVAKGARDFGPEQMAIRSKAFAVIRDVFRRHGAVEIDTPVFELRETLTGKYGEEGGKLIYDLADQGGELLSLRYDLTVPFARYVALHSIKAMRRFHIAKVYRRDQPQIERGRFREFYQCDFDVAGAYASAPMLPDAEVVSVACEILGSLAVGKFCLKLSHRGLLDGMLSVAGVSGAKFQTVCSSIDKLDKEPWEAVREELVEQKGIADAVADRI 675
            RKPK+ KG RDF P+QMAIR +AF  I DVF+RHGAV IDTPVFELRETL GKYGE+  KLIYDLADQGGE+LSLRYDLTVPFAR+VA+H+   ++R+HI KVYRRDQPQ+ RGRFREF+QCDFD+AG+YAS  M+PDAEV+ V  EILG L +G+F +K++HRGLLD ML +AGV   KF+ +CS+IDKLDKEPWEAVR E+VE+KG+ +AVAD I
Sbjct:  510 RKPKIPKGTRDFQPDQMAIRERAFGAITDVFKRHGAVSIDTPVFELRETLMGKYGEDS-KLIYDLADQGGEILSLRYDLTVPFARFVAVHNPGNIKRYHIGKVYRRDQPQMTRGRFREFFQCDFDIAGSYAS--MVPDAEVIKVLTEILGDLKLGQFEVKINHRGLLDAMLDIAGVPAQKFRPICSAIDKLDKEPWEAVRTEMVEEKGLPEAVADTI 723          
BLAST of mRNA_M-pyrifera_M_contig73223.17373.1 vs. uniprot
Match: A0A5A8EI51_CAFRO (Histidine--tRNA ligase n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EI51_CAFRO)

HSP 1 Score: 314 bits (804), Expect = 3.110e-97
Identity = 153/218 (70.18%), Postives = 181/218 (83.03%), Query Frame = 1
Query:   22 GRKPKVAKGARDFGPEQMAIRSKAFAVIRDVFRRHGAVEIDTPVFELRETLTGKYGEEGGKLIYDLADQGGELLSLRYDLTVPFARYVALHSIKAMRRFHIAKVYRRDQPQIERGRFREFYQCDFDVAGAYASAPMLPDAEVVSVACEILGSLAVGKFCLKLSHRGLLDGMLSVAGVSGAKFQTVCSSIDKLDKEPWEAVREELVEQKGIADAVADRI 675
            G   K+AKG RD+GP++M +R   FA IR VF+RHGAVEIDTPVFE R+TLTGKYGEEG KLIY LADQGG+LLSLRYDLTVPFAR+VA H +  ++RFHIA+VYRRDQPQ+ RGR+REFYQCDFD+AG++A   M+PDAEV+SVACEILGSL +G F  KL+HRG+LDG L +AGV   K +TVCSSIDKLDKEPW  VREELV +KG++  VAD I
Sbjct:  552 GADAKIAKGTRDYGPQEMRVREPVFAAIRSVFKRHGAVEIDTPVFEHRDTLTGKYGEEGAKLIYHLADQGGQLLSLRYDLTVPFARFVASHGLDKIKRFHIARVYRRDQPQMTRGRYREFYQCDFDIAGSHAL--MVPDAEVISVACEILGSLPIGDFQFKLNHRGVLDGCLELAGVPSGKVRTVCSSIDKLDKEPWADVREELVGEKGVSPDVADAI 767          
BLAST of mRNA_M-pyrifera_M_contig73223.17373.1 vs. uniprot
Match: A0A7S2LH49_9STRA (Histidine--tRNA ligase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LH49_9STRA)

HSP 1 Score: 310 bits (795), Expect = 1.340e-96
Identity = 150/225 (66.67%), Postives = 189/225 (84.00%), Query Frame = 1
Query:    1 ALMTEDVGRKPKVAKGARDFGPEQMAIRSKAFAVIRDVFRRHGAVEIDTPVFELRETLTGKYGEEGGKLIYDLADQGGELLSLRYDLTVPFARYVALHSIKAMRRFHIAKVYRRDQPQIERGRFREFYQCDFDVAGAYASAPMLPDAEVVSVACEILGSLAVGKFCLKLSHRGLLDGMLSVAGVSGAKFQTVCSSIDKLDKEPWEAVREELVEQKGIADAVADRI 675
            AL++  + RKPKVAKG RD+ PEQMAIR KAF +IR VF+RHGAVEIDTPVFEL+ETLTGKYGE+  KLIYDLADQGGELL+LRYDLTVPFAR++A++++  ++RFHI KVYRRDQPQ+ +GR+REFYQCDFD+AG Y    M+PD+E ++VACEIL SL +G F +KL+HR LLD +L + GV   KF+T+CS++DKLDKEPW  VR E+VE+KG++  VAD+I
Sbjct:  467 ALLSGGMQRKPKVAKGTRDYLPEQMAIRDKAFTIIRRVFKRHGAVEIDTPVFELKETLTGKYGEDS-KLIYDLADQGGELLALRYDLTVPFARFLAVNAVGNIKRFHIGKVYRRDQPQLSKGRYREFYQCDFDIAGVYGR--MVPDSECLAVACEILDSLPIGDFGIKLNHRRLLDAILDLCGVPADKFRTICSAVDKLDKEPWSEVRREMVEEKGLSGDVADKI 688          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73223.17373.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1SGC3_9CHLO3.750e-10170.51Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
D8U6R9_VOLCA2.440e-10070.05Histidine--tRNA ligase n=1 Tax=Volvox carteri f. n... [more]
A0A813A3Z6_9DINO1.400e-9970.18HARS1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A812LA96_9DINO3.440e-9973.63Histidine--tRNA ligase n=1 Tax=Symbiodinium sp. KB... [more]
B8CDX2_THAPS1.060e-9867.74Histidine--tRNA ligase n=1 Tax=Thalassiosira pseud... [more]
A0A7J7QLS0_9CHLO1.310e-9871.43Histidine--tRNA ligase n=1 Tax=Scenedesmus sp. NRE... [more]
A0A061R9E0_9CHLO1.390e-9766.52Histidine--tRNA ligase n=1 Tax=Tetraselmis sp. GSL... [more]
A0A150FY79_GONPE2.230e-9770.51Histidine--tRNA ligase n=1 Tax=Gonium pectorale Ta... [more]
A0A5A8EI51_CAFRO3.110e-9770.18Histidine--tRNA ligase n=5 Tax=Cafeteria roenberge... [more]
A0A7S2LH49_9STRA1.340e-9666.67Histidine--tRNA ligase n=1 Tax=Skeletonema marinoi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73223contigM-pyrifera_M_contig73223:433..1107 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score311.2
Seed ortholog evalue3.8e-82
Seed eggNOG ortholog3067.XP_002954339.1
KEGG rclassRC00055,RC00523
KEGG koko:K01892
KEGG ReactionR03655
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032543,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140053,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Histidyl-tRNA synthetase
EggNOG OGs34JEW@3041,37SDK@33090,COG0124@1,KOG1936@2759
EC6.1.1.21
COG Functional cat.J
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Exons1
Model size675
Cds size669
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816629.3879354-UTR-M-pyrifera_M_contig73223:432..4381622816629.3879354-UTR-M-pyrifera_M_contig73223:432..438Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig73223 433..438 +
1692278086.7960927-UTR-M-pyrifera_M_contig73223:432..4381692278086.7960927-UTR-M-pyrifera_M_contig73223:432..438Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig73223 433..438 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816629.4044054-CDS-M-pyrifera_M_contig73223:438..11071622816629.4044054-CDS-M-pyrifera_M_contig73223:438..1107Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73223 439..1107 +
1692278086.807139-CDS-M-pyrifera_M_contig73223:438..11071692278086.807139-CDS-M-pyrifera_M_contig73223:438..1107Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73223 439..1107 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73223.17373.1prot_M-pyrifera_M_contig73223.17373.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig73223 439..1107 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig73223.17373.1

>prot_M-pyrifera_M_contig73223.17373.1 ID=prot_M-pyrifera_M_contig73223.17373.1|Name=mRNA_M-pyrifera_M_contig73223.17373.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=223bp
MTEDVGRKPKVAKGARDFGPEQMAIRSKAFAVIRDVFRRHGAVEIDTPVF
ELRETLTGKYGEEGGKLIYDLADQGGELLSLRYDLTVPFARYVALHSIKA
MRRFHIAKVYRRDQPQIERGRFREFYQCDFDVAGAYASAPMLPDAEVVSV
ACEILGSLAVGKFCLKLSHRGLLDGMLSVAGVSGAKFQTVCSSIDKLDKE
PWEAVREELVEQKGIADAVADRI
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mRNA from alignment at M-pyrifera_M_contig73223:433..1107+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig73223.17373.1 ID=mRNA_M-pyrifera_M_contig73223.17373.1|Name=mRNA_M-pyrifera_M_contig73223.17373.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=675bp|location=Sequence derived from alignment at M-pyrifera_M_contig73223:433..1107+ (Macrocystis pyrifera P11B4 male)
GCTTTGATGACTGAGGATGTTGGTCGGAAGCCCAAGGTGGCGAAAGGAGC TCGGGATTTCGGTCCAGAGCAGATGGCGATTCGTTCCAAGGCGTTTGCAG TGATTCGCGACGTGTTCCGTCGCCACGGCGCTGTGGAAATCGACACTCCG GTGTTTGAGTTGCGTGAGACTCTGACTGGCAAGTATGGGGAGGAAGGTGG GAAGCTGATTTACGATCTGGCCGACCAGGGTGGGGAGCTGCTGTCGCTTC GCTACGACCTCACGGTGCCGTTTGCGCGCTACGTGGCGCTGCACTCCATC AAGGCCATGCGTCGCTTCCACATTGCGAAAGTGTATCGCCGCGACCAGCC TCAGATCGAGCGTGGCCGGTTTCGCGAATTCTACCAGTGCGATTTCGACG TGGCCGGCGCCTACGCCTCTGCACCCATGCTGCCTGACGCGGAGGTGGTG AGCGTGGCCTGCGAGATTCTCGGCAGTCTTGCAGTGGGCAAGTTTTGCCT CAAGCTCTCGCACAGAGGCCTGCTCGACGGAATGCTCAGCGTGGCCGGCG TCAGCGGCGCAAAGTTCCAGACCGTGTGCTCCTCCATCGACAAGCTAGAC AAGGAACCCTGGGAGGCTGTCAGAGAAGAGCTCGTGGAGCAGAAAGGGAT CGCCGACGCCGTCGCTGACAGGATT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig73223:433..1107+

>mRNA_M-pyrifera_M_contig73223.17373.1 ID=mRNA_M-pyrifera_M_contig73223.17373.1|Name=mRNA_M-pyrifera_M_contig73223.17373.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1338bp|location=Sequence derived from alignment at M-pyrifera_M_contig73223:433..1107+ (Macrocystis pyrifera P11B4 male)
ATGACTGAGGATGTTGGTCGGAAGCCCAAGGTGGCGAAAGGAGCTCGGGA
TTTCGGTCCAGAGCAGATGGCGATTCGTTCCAAGGCGTTTGCAGTGATTC
GCGACGTGTTCCGTCGCCACGGCGCTGTGGAAATCGACACTCCGGTGTTT
GAGTTGCGTGAGACTCTGACTGGCAAGTATGGGGAGGAAGGTGGGAAGCT
GATTTACGATCTGGCCGACCAGGGTGGGGAGCTGCTGTCGCTTCGCTACG
ACCTCACGGTGCCGTTTGCGCGCTACGTGGCGCTGCACTCCATCAAGGCC
ATGCGTCGCTTCCACATTGCGAAAGTGTATCGCCGCGACCAGCCTCAGAT
CGAGCGTGGCCGGTTTCGCGAATTCTACCAGTGCGATTTCGACGTGGCCG
GCGCCTACGCCTCTGCACCCATGCTGCCTGACGCGGAGGTGGTGAGCGTG
GCCTGCGAGATTCTCGGCAGTCTTGCAGTGGGCAAGTTTTGCCTCAAGCT
CTCGCACAGAGGCCTGCTCGACGGAATGCTCAGCGTGGCCGGCGTCAGCG
GCGCAAAGTTCCAGACCGTGTGCTCCTCCATCGACAAGCTAGACAAGGAA
CCCTGGGAGGCTGTCAGAGAAGAGCTCGTGGAGCAGAAAGGGATCGCCGA
CGCCGTCGCTGACAGGATTATGACTGAGGATGTTGGTCGGAAGCCCAAGG
TGGCGAAAGGAGCTCGGGATTTCGGTCCAGAGCAGATGGCGATTCGTTCC
AAGGCGTTTGCAGTGATTCGCGACGTGTTCCGTCGCCACGGCGCTGTGGA
AATCGACACTCCGGTGTTTGAGTTGCGTGAGACTCTGACTGGCAAGTATG
GGGAGGAAGGTGGGAAGCTGATTTACGATCTGGCCGACCAGGGTGGGGAG
CTGCTGTCGCTTCGCTACGACCTCACGGTGCCGTTTGCGCGCTACGTGGC
GCTGCACTCCATCAAGGCCATGCGTCGCTTCCACATTGCGAAAGTGTATC
GCCGCGACCAGCCTCAGATCGAGCGTGGCCGGTTTCGCGAATTCTACCAG
TGCGATTTCGACGTGGCCGGCGCCTACGCCTCTGCACCCATGCTGCCTGA
CGCGGAGGTGGTGAGCGTGGCCTGCGAGATTCTCGGCAGTCTTGCAGTGG
GCAAGTTTTGCCTCAAGCTCTCGCACAGAGGCCTGCTCGACGGAATGCTC
AGCGTGGCCGGCGTCAGCGGCGCAAAGTTCCAGACCGTGTGCTCCTCCAT
CGACAAGCTAGACAAGGAACCCTGGGAGGCTGTCAGAGAAGAGCTCGTGG
AGCAGAAAGGGATCGCCGACGCCGTCGCTGACAGGATT
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