mRNA_M-pyrifera_M_contig73223.17373.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig73223.17373.1 vs. uniprot
Match: A0A7S1SGC3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SGC3_9CHLO) HSP 1 Score: 306 bits (783), Expect = 3.750e-101 Identity = 153/217 (70.51%), Postives = 180/217 (82.95%), Query Frame = 1 Query: 25 RKPKVAKGARDFGPEQMAIRSKAFAVIRDVFRRHGAVEIDTPVFELRETLTGKYGEEGGKLIYDLADQGGELLSLRYDLTVPFARYVALHSIKAMRRFHIAKVYRRDQPQIERGRFREFYQCDFDVAGAYASAPMLPDAEVVSVACEILGSLAVGKFCLKLSHRGLLDGMLSVAGVSGAKFQTVCSSIDKLDKEPWEAVREELVEQKGIADAVADRI 675 RKPK+AKG RDF P+QM IR +AFA I VF+RHGAV IDTPVFELRETL GKYGE+ KLIYDLADQGGE LSLRYDLTVPFARY ALH + ++R+HIA+VYRRDQPQ+ RGRFREF+QCDFD+AGAYA+ M+PDAEV+ V EIL LA+G F +KL+HRGLLD M+ +AGV +KF+ +CS+IDKLDKEPWE VR E+VE KG+ VADRI Sbjct: 49 RKPKIAKGTRDFMPDQMTIREQAFAKIVSVFKRHGAVAIDTPVFELRETLMGKYGEDS-KLIYDLADQGGENLSLRYDLTVPFARYTALHGMGNIKRYHIARVYRRDQPQMNRGRFREFFQCDFDIAGAYAA--MVPDAEVLKVLVEILSDLALGDFEIKLNHRGLLDTMMDIAGVPTSKFRPICSAIDKLDKEPWEEVRREMVEDKGLPGPVADRI 262
BLAST of mRNA_M-pyrifera_M_contig73223.17373.1 vs. uniprot
Match: D8U6R9_VOLCA (Histidine--tRNA ligase n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U6R9_VOLCA) HSP 1 Score: 307 bits (787), Expect = 2.440e-100 Identity = 152/217 (70.05%), Postives = 182/217 (83.87%), Query Frame = 1 Query: 25 RKPKVAKGARDFGPEQMAIRSKAFAVIRDVFRRHGAVEIDTPVFELRETLTGKYGEEGGKLIYDLADQGGELLSLRYDLTVPFARYVALHSIKAMRRFHIAKVYRRDQPQIERGRFREFYQCDFDVAGAYASAPMLPDAEVVSVACEILGSLAVGKFCLKLSHRGLLDGMLSVAGVSGAKFQTVCSSIDKLDKEPWEAVREELVEQKGIADAVADRI 675 RKPK+ KG RDF PEQMAIR KAFA+I VF++HGAV IDTPVFELRETL GKYGE+ KLIYDLADQGGE+LSLRYDLTVPFAR+VA+HSI ++R+HI KVYRRDQPQ+ RGRFREF+QCDFD+AGAYA PM+ DAE++ V EIL L +GKF +K++HRGLLD ML++AGV KF+ +CS+IDKLDKEPWE VR+E+V KG+ + VAD I Sbjct: 16 RKPKIPKGTRDFLPEQMAIREKAFAIIVSVFKKHGAVAIDTPVFELRETLMGKYGEDS-KLIYDLADQGGEILSLRYDLTVPFARFVAVHSIGNIKRYHIGKVYRRDQPQMTRGRFREFFQCDFDIAGAYA--PMVADAEIIKVLTEILTDLQLGKFEVKINHRGLLDAMLAIAGVPPQKFRPICSAIDKLDKEPWEIVRQEMVVDKGLPEEVADAI 229
BLAST of mRNA_M-pyrifera_M_contig73223.17373.1 vs. uniprot
Match: A0A813A3Z6_9DINO (HARS1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A3Z6_9DINO) HSP 1 Score: 314 bits (804), Expect = 1.400e-99 Identity = 153/218 (70.18%), Postives = 181/218 (83.03%), Query Frame = 1 Query: 22 GRKPKVAKGARDFGPEQMAIRSKAFAVIRDVFRRHGAVEIDTPVFELRETLTGKYGEEGGKLIYDLADQGGELLSLRYDLTVPFARYVALHSIKAMRRFHIAKVYRRDQPQIERGRFREFYQCDFDVAGAYASAPMLPDAEVVSVACEILGSLAVGKFCLKLSHRGLLDGMLSVAGVSGAKFQTVCSSIDKLDKEPWEAVREELVEQKGIADAVADRI 675 G K+AKG RD+GP++M +R FA IR VF+RHGAVEIDTPVFE R+TLTGKYGEEG KLIY LADQGG+LLSLRYDLTVPFAR+VA H + ++RFHIA+VYRRDQPQ+ RGR+REFYQCDFD+AG++A M+PDAEV+SVACEILGSL +G F KL+HRG+LDG L +AGV K +TVCSSIDKLDKEPW VREELV +KG++ VAD I Sbjct: 13 GADAKIAKGTRDYGPQEMRVREPVFAAIRSVFKRHGAVEIDTPVFEHRDTLTGKYGEEGAKLIYHLADQGGQLLSLRYDLTVPFARFVASHGLDKIKRFHIARVYRRDQPQMTRGRYREFYQCDFDIAGSHAL--MVPDAEVISVACEILGSLPIGDFQFKLNHRGVLDGCLELAGVPSGKVRTVCSSIDKLDKEPWADVREELVGEKGVSPDVADAI 228
BLAST of mRNA_M-pyrifera_M_contig73223.17373.1 vs. uniprot
Match: A0A812LA96_9DINO (Histidine--tRNA ligase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812LA96_9DINO) HSP 1 Score: 305 bits (781), Expect = 3.440e-99 Identity = 148/201 (73.63%), Postives = 172/201 (85.57%), Query Frame = 1 Query: 73 MAIRSKAFAVIRDVFRRHGAVEIDTPVFELRETLTGKYGEEGGKLIYDLADQGGELLSLRYDLTVPFARYVALHSIKAMRRFHIAKVYRRDQPQIERGRFREFYQCDFDVAGAYASAPMLPDAEVVSVACEILGSLAVGKFCLKLSHRGLLDGMLSVAGVSGAKFQTVCSSIDKLDKEPWEAVREELVEQKGIADAVADRI 675 MA+R +AF IR VF+RHGA EIDTPVFELRETL GKYGEEGGKLIYDLADQGGELLSLRYDLTVPFARY A H + +M+RFHI+KVYRRD I RGR+REFYQCD+DVAG YA+ M+PDAEV++VAC+IL SL +G F +K +HRGLLDGML +AGV AKF+T+CSSIDKLDKEPW +VREE+V +KG+ AVADRI Sbjct: 1 MAVRERAFTTIRSVFKRHGAAEIDTPVFELRETLLGKYGEEGGKLIYDLADQGGELLSLRYDLTVPFARYCAQHGVASMKRFHISKVYRRDNVNISRGRYREFYQCDYDVAGTYAA--MMPDAEVLAVACDILRSLPIGPFTVKFNHRGLLDGMLELAGVPPAKFRTICSSIDKLDKEPWTSVREEMVAEKGLEGAVADRI 199
BLAST of mRNA_M-pyrifera_M_contig73223.17373.1 vs. uniprot
Match: B8CDX2_THAPS (Histidine--tRNA ligase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDX2_THAPS) HSP 1 Score: 303 bits (777), Expect = 1.060e-98 Identity = 147/217 (67.74%), Postives = 181/217 (83.41%), Query Frame = 1 Query: 25 RKPKVAKGARDFGPEQMAIRSKAFAVIRDVFRRHGAVEIDTPVFELRETLTGKYGEEGGKLIYDLADQGGELLSLRYDLTVPFARYVALHSIKAMRRFHIAKVYRRDQPQIERGRFREFYQCDFDVAGAYASAPMLPDAEVVSVACEILGSLAVGKFCLKLSHRGLLDGMLSVAGVSGAKFQTVCSSIDKLDKEPWEAVREELVEQKGIADAVADRI 675 R+PKVAKG RD+ PEQM+IR KAF +IR VF+RHGAVEIDTPVFEL+ETLTGKYGE+ KLIYDLADQGGELL+LRYDLTVPFAR++A++++ ++RFHI KVYRRDQP + RGR+REFYQCDFD+AG Y M+PD+E ++VACEIL SL +G F +KL+HR LLD +L + GV KF+T+CS++DKLDKEPW VR E+VE KG+ VADRI Sbjct: 3 RRPKVAKGTRDYLPEQMSIRDKAFTIIRRVFKRHGAVEIDTPVFELKETLTGKYGEDS-KLIYDLADQGGELLALRYDLTVPFARFLAVNAVGNIKRFHIGKVYRRDQPALSRGRYREFYQCDFDIAGVYGR--MVPDSECLAVACEILDSLPIGDFGIKLNHRRLLDAILDLCGVPADKFRTICSAVDKLDKEPWSEVRREMVEDKGLTGDVADRI 216
BLAST of mRNA_M-pyrifera_M_contig73223.17373.1 vs. uniprot
Match: A0A7J7QLS0_9CHLO (Histidine--tRNA ligase n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QLS0_9CHLO) HSP 1 Score: 307 bits (786), Expect = 1.310e-98 Identity = 155/217 (71.43%), Postives = 182/217 (83.87%), Query Frame = 1 Query: 25 RKPKVAKGARDFGPEQMAIRSKAFAVIRDVFRRHGAVEIDTPVFELRETLTGKYGEEGGKLIYDLADQGGELLSLRYDLTVPFARYVALHSIKAMRRFHIAKVYRRDQPQIERGRFREFYQCDFDVAGAYASAPMLPDAEVVSVACEILGSLAVGKFCLKLSHRGLLDGMLSVAGVSGAKFQTVCSSIDKLDKEPWEAVREELVEQKGIADAVADRI 675 RKPKVAKGARDF P+QMAIR AF I VF+RHGAV IDTPVFELRETL GKYGE+ KLIYDLADQGGELLSLRYDLTVPFARYVA+++I ++R+HI KVYRRDQPQ+ RGRFREF+QCDFD+AG+YA+ M+PDAEV+SV EIL L +GKF +KL+HR LLD ML++AGV KF+ +CS+IDKLDKEPWE VR E+VE+KG+ VAD I Sbjct: 134 RKPKVAKGARDFLPDQMAIREAAFGTITSVFKRHGAVAIDTPVFELRETLMGKYGEDS-KLIYDLADQGGELLSLRYDLTVPFARYVAVNAIGNIKRYHIGKVYRRDQPQLNRGRFREFFQCDFDIAGSYAA--MVPDAEVLSVLVEILRDLQLGKFTVKLNHRRLLDAMLAIAGVPPQKFRPICSAIDKLDKEPWEVVRAEMVEEKGLPGDVADTI 347
BLAST of mRNA_M-pyrifera_M_contig73223.17373.1 vs. uniprot
Match: A0A061R9E0_9CHLO (Histidine--tRNA ligase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R9E0_9CHLO) HSP 1 Score: 302 bits (773), Expect = 1.390e-97 Identity = 149/224 (66.52%), Postives = 179/224 (79.91%), Query Frame = 1 Query: 4 LMTEDVGRKPKVAKGARDFGPEQMAIRSKAFAVIRDVFRRHGAVEIDTPVFELRETLTGKYGEEGGKLIYDLADQGGELLSLRYDLTVPFARYVALHSIKAMRRFHIAKVYRRDQPQIERGRFREFYQCDFDVAGAYASAPMLPDAEVVSVACEILGSLAVGKFCLKLSHRGLLDGMLSVAGVSGAKFQTVCSSIDKLDKEPWEAVREELVEQKGIADAVADRI 675 + RKPK+ KG RDF P+QM IR KAFA I VF+RHGAV IDTPVFELRETL GKYGE+ KLIYDLADQGGE+LSLRYDLTVPFARY ALH + ++R+HIA+VYRRDQPQ+ RGRFREF+QCDFD+AG Y + M+PDAEV+ V EIL L +G F +KL+HRG+LD ++ +AGV +KF+T+CS+IDKLDKEPWEAVR E+ E KG+ VADRI Sbjct: 44 IEANQASRKPKIPKGTRDFMPDQMTIREKAFAKIVGVFKRHGAVAIDTPVFELRETLMGKYGEDS-KLIYDLADQGGEILSLRYDLTVPFARYTALHGMGNIKRYHIARVYRRDQPQMTRGRFREFFQCDFDIAGQYXA--MVPDAEVIKVLTEILSDLDLGDFEIKLNHRGILDTVMDIAGVPPSKFRTICSAIDKLDKEPWEAVRREMTEDKGLPGDVADRI 264
BLAST of mRNA_M-pyrifera_M_contig73223.17373.1 vs. uniprot
Match: A0A150FY79_GONPE (Histidine--tRNA ligase n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150FY79_GONPE) HSP 1 Score: 313 bits (802), Expect = 2.230e-97 Identity = 153/217 (70.51%), Postives = 184/217 (84.79%), Query Frame = 1 Query: 25 RKPKVAKGARDFGPEQMAIRSKAFAVIRDVFRRHGAVEIDTPVFELRETLTGKYGEEGGKLIYDLADQGGELLSLRYDLTVPFARYVALHSIKAMRRFHIAKVYRRDQPQIERGRFREFYQCDFDVAGAYASAPMLPDAEVVSVACEILGSLAVGKFCLKLSHRGLLDGMLSVAGVSGAKFQTVCSSIDKLDKEPWEAVREELVEQKGIADAVADRI 675 RKPK+ KG RDF P+QMAIR +AF I DVF+RHGAV IDTPVFELRETL GKYGE+ KLIYDLADQGGE+LSLRYDLTVPFAR+VA+H+ ++R+HI KVYRRDQPQ+ RGRFREF+QCDFD+AG+YAS M+PDAEV+ V EILG L +G+F +K++HRGLLD ML +AGV KF+ +CS+IDKLDKEPWEAVR E+VE+KG+ +AVAD I Sbjct: 510 RKPKIPKGTRDFQPDQMAIRERAFGAITDVFKRHGAVSIDTPVFELRETLMGKYGEDS-KLIYDLADQGGEILSLRYDLTVPFARFVAVHNPGNIKRYHIGKVYRRDQPQMTRGRFREFFQCDFDIAGSYAS--MVPDAEVIKVLTEILGDLKLGQFEVKINHRGLLDAMLDIAGVPAQKFRPICSAIDKLDKEPWEAVRTEMVEEKGLPEAVADTI 723
BLAST of mRNA_M-pyrifera_M_contig73223.17373.1 vs. uniprot
Match: A0A5A8EI51_CAFRO (Histidine--tRNA ligase n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EI51_CAFRO) HSP 1 Score: 314 bits (804), Expect = 3.110e-97 Identity = 153/218 (70.18%), Postives = 181/218 (83.03%), Query Frame = 1 Query: 22 GRKPKVAKGARDFGPEQMAIRSKAFAVIRDVFRRHGAVEIDTPVFELRETLTGKYGEEGGKLIYDLADQGGELLSLRYDLTVPFARYVALHSIKAMRRFHIAKVYRRDQPQIERGRFREFYQCDFDVAGAYASAPMLPDAEVVSVACEILGSLAVGKFCLKLSHRGLLDGMLSVAGVSGAKFQTVCSSIDKLDKEPWEAVREELVEQKGIADAVADRI 675 G K+AKG RD+GP++M +R FA IR VF+RHGAVEIDTPVFE R+TLTGKYGEEG KLIY LADQGG+LLSLRYDLTVPFAR+VA H + ++RFHIA+VYRRDQPQ+ RGR+REFYQCDFD+AG++A M+PDAEV+SVACEILGSL +G F KL+HRG+LDG L +AGV K +TVCSSIDKLDKEPW VREELV +KG++ VAD I Sbjct: 552 GADAKIAKGTRDYGPQEMRVREPVFAAIRSVFKRHGAVEIDTPVFEHRDTLTGKYGEEGAKLIYHLADQGGQLLSLRYDLTVPFARFVASHGLDKIKRFHIARVYRRDQPQMTRGRYREFYQCDFDIAGSHAL--MVPDAEVISVACEILGSLPIGDFQFKLNHRGVLDGCLELAGVPSGKVRTVCSSIDKLDKEPWADVREELVGEKGVSPDVADAI 767
BLAST of mRNA_M-pyrifera_M_contig73223.17373.1 vs. uniprot
Match: A0A7S2LH49_9STRA (Histidine--tRNA ligase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LH49_9STRA) HSP 1 Score: 310 bits (795), Expect = 1.340e-96 Identity = 150/225 (66.67%), Postives = 189/225 (84.00%), Query Frame = 1 Query: 1 ALMTEDVGRKPKVAKGARDFGPEQMAIRSKAFAVIRDVFRRHGAVEIDTPVFELRETLTGKYGEEGGKLIYDLADQGGELLSLRYDLTVPFARYVALHSIKAMRRFHIAKVYRRDQPQIERGRFREFYQCDFDVAGAYASAPMLPDAEVVSVACEILGSLAVGKFCLKLSHRGLLDGMLSVAGVSGAKFQTVCSSIDKLDKEPWEAVREELVEQKGIADAVADRI 675 AL++ + RKPKVAKG RD+ PEQMAIR KAF +IR VF+RHGAVEIDTPVFEL+ETLTGKYGE+ KLIYDLADQGGELL+LRYDLTVPFAR++A++++ ++RFHI KVYRRDQPQ+ +GR+REFYQCDFD+AG Y M+PD+E ++VACEIL SL +G F +KL+HR LLD +L + GV KF+T+CS++DKLDKEPW VR E+VE+KG++ VAD+I Sbjct: 467 ALLSGGMQRKPKVAKGTRDYLPEQMAIRDKAFTIIRRVFKRHGAVEIDTPVFELKETLTGKYGEDS-KLIYDLADQGGELLALRYDLTVPFARFLAVNAVGNIKRFHIGKVYRRDQPQLSKGRYREFYQCDFDIAGVYGR--MVPDSECLAVACEILDSLPIGDFGIKLNHRRLLDAILDLCGVPADKFRTICSAVDKLDKEPWSEVRREMVEEKGLSGDVADKI 688 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73223.17373.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig73223.17373.1 >prot_M-pyrifera_M_contig73223.17373.1 ID=prot_M-pyrifera_M_contig73223.17373.1|Name=mRNA_M-pyrifera_M_contig73223.17373.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=223bp MTEDVGRKPKVAKGARDFGPEQMAIRSKAFAVIRDVFRRHGAVEIDTPVFback to top mRNA from alignment at M-pyrifera_M_contig73223:433..1107+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig73223.17373.1 ID=mRNA_M-pyrifera_M_contig73223.17373.1|Name=mRNA_M-pyrifera_M_contig73223.17373.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=675bp|location=Sequence derived from alignment at M-pyrifera_M_contig73223:433..1107+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig73223:433..1107+ >mRNA_M-pyrifera_M_contig73223.17373.1 ID=mRNA_M-pyrifera_M_contig73223.17373.1|Name=mRNA_M-pyrifera_M_contig73223.17373.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1338bp|location=Sequence derived from alignment at M-pyrifera_M_contig73223:433..1107+ (Macrocystis pyrifera P11B4 male)back to top |