mRNA_M-pyrifera_M_contig7163.17076.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7163.17076.1 vs. uniprot
Match: D7FMN7_ECTSI (Probable fusion protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMN7_ECTSI) HSP 1 Score: 174 bits (441), Expect = 1.190e-50 Identity = 84/113 (74.34%), Postives = 99/113 (87.61%), Query Frame = 1 Query: 1 LMCYICATNAGNNILRAHYAFMAFRSGVPIRRLATIASNDADSDVASDKAVGAKEVAAMALAEAASGTPSTMSPTLIGLLMRQYSPAGVIELVITVSVAFMFHRWTSVYMPRE 339 LMCYICATNAGN ILRAHYAFMA R+G+PIR+LAT + D+ VA+D + AK+VAAMALAEA SGTPST+SP L+GLLMRQYSPAGVIEL+ TVS+AFM+HRWT++YMPRE Sbjct: 266 LMCYICATNAGNTILRAHYAFMAHRNGMPIRQLATATNTDSSEAVAADDTIDAKQVAAMALAEACSGTPSTVSPVLVGLLMRQYSPAGVIELIATVSLAFMYHRWTAIYMPRE 378
BLAST of mRNA_M-pyrifera_M_contig7163.17076.1 vs. uniprot
Match: A0A6H5JWC3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWC3_9PHAE) HSP 1 Score: 114 bits (286), Expect = 1.250e-27 Identity = 65/113 (57.52%), Postives = 76/113 (67.26%), Query Frame = 1 Query: 1 LMCYICATNAGNNILRAHYAFMAFRSGVPIRRLATIASNDADSDVASDKAVGAKEVAAMALAEAASGTPSTMSPTLIGLLMRQYSPAGVIELVITVSVAFMFHRWTSVYMPRE 339 LM Y CATNA NN+LRAH+AFMA RSGV + RL + D S D A E AAMA A+AAS TP+ M+ L GL+ R +SP VIEL+ITVSV F HRWTSVY+PR Sbjct: 350 LMAYQCATNAENNVLRAHFAFMAMRSGVTLSRLIQV--TDITSTGGGDSAA---EDAAMAFAQAASWTPTRMTAALAGLISRLFSPPAVIELLITVSVEFAIHRWTSVYVPRR 457
BLAST of mRNA_M-pyrifera_M_contig7163.17076.1 vs. uniprot
Match: A0A6H5JXG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXG8_9PHAE) HSP 1 Score: 108 bits (269), Expect = 1.310e-25 Identity = 56/112 (50.00%), Postives = 76/112 (67.86%), Query Frame = 1 Query: 4 MCYICATNAGNNILRAHYAFMAFRSGVPIRRLATIASNDADSDVASDKAVGAKEVAAMALAEAASGTPSTMSPTLIGLLMRQYSPAGVIELVITVSVAFMFHRWTSVYMPRE 339 M Y+ AT+A N ILRAH+AFMA R+GV + LA+ + D+D D K+ AA+++A A GTP + L+ LLMRQY+PAGVIELV T+S+ M RWTS+YMP++ Sbjct: 292 MGYMLATSADNTILRAHFAFMAHRNGVSVSNLASATAEGGDTDGGEDL----KKAAALSMARACGGTPGPLPRELVALLMRQYTPAGVIELVNTLSLVSMLQRWTSIYMPKQ 399
BLAST of mRNA_M-pyrifera_M_contig7163.17076.1 vs. uniprot
Match: D7G5G2_ECTSI (Probable fusion protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G2_ECTSI) HSP 1 Score: 101 bits (252), Expect = 3.440e-24 Identity = 54/106 (50.94%), Postives = 71/106 (66.98%), Query Frame = 1 Query: 22 TNAGNNILRAHYAFMAFRSGVPIRRLATIASNDADSDVASDKAVGAKEVAAMALAEAASGTPSTMSPTLIGLLMRQYSPAGVIELVITVSVAFMFHRWTSVYMPRE 339 T+A N ILRAH+AFMA R+GV + LA + D+D D K+ AA+++A A SGT M L+ LLMRQY+PAGVIELV T+S+ M RWTS+YMP++ Sbjct: 104 TSADNTILRAHFAFMAHRNGVSVSDLANATAEGGDTDGGEDL----KKAAALSMARACSGTLGPMPRELVALLMRQYTPAGVIELVNTLSLVSMLQRWTSIYMPKQ 205
BLAST of mRNA_M-pyrifera_M_contig7163.17076.1 vs. uniprot
Match: A0A0C2CZ51_9DELT (Putative fusion protein n=2 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A0C2CZ51_9DELT) HSP 1 Score: 63.9 bits (154), Expect = 1.540e-9 Identity = 36/108 (33.33%), Postives = 62/108 (57.41%), Query Frame = 1 Query: 4 MCYICATNAGNNILRAHYAFMAFRSGVPIRRLATIASNDADSDVASDKAVGAKEVAAMALAEAASGTPSTMSPTLIGLLMRQYSPAGVIELVITVSVAFMFHRWTSVY 327 +C++ A + N +L AH+AF+A R+G +RLA+ + D ++ AA A A A+ +P+ ++ I L ++PAG+IE+V+ +SV M +R+TS Y Sbjct: 324 LCFVAAKKSKNPLLAAHFAFLAIRAGATAKRLASALTPGDDEG---------RDAAAFAFAHVAAISPAAVTRKEIAGLTSFFTPAGIIEIVVALSVHGMLNRYTSTY 422
BLAST of mRNA_M-pyrifera_M_contig7163.17076.1 vs. uniprot
Match: A0A2S9YSM1_9DELT (Uncharacterized protein n=1 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A2S9YSM1_9DELT) HSP 1 Score: 63.2 bits (152), Expect = 2.870e-9 Identity = 39/108 (36.11%), Postives = 55/108 (50.93%), Query Frame = 1 Query: 4 MCYICATNAGNNILRAHYAFMAFRSGVPIRRLATIASNDADSDVASDKAVGAKEVAAMALAEAASGTPSTMSPTLIGLLMRQYSPAGVIELVITVSVAFMFHRWTSVY 327 M ++ A + N +L AHYA+ A RSG + L D +E AA ALA A S P + I LMR +SP G+IEL++T++ + HR+TS Y Sbjct: 325 MGFVAAKASHNELLAAHYAYGAMRSGANVGML---------RDALEPSQAETREAAAFALARAISSPPVELRNDQILSLMRGHSPVGIIELIVTLATYTLLHRYTSTY 423
BLAST of mRNA_M-pyrifera_M_contig7163.17076.1 vs. uniprot
Match: A0A0C2D7D5_9DELT (Uncharacterized protein n=1 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A0C2D7D5_9DELT) HSP 1 Score: 63.2 bits (152), Expect = 2.870e-9 Identity = 39/108 (36.11%), Postives = 56/108 (51.85%), Query Frame = 1 Query: 4 MCYICATNAGNNILRAHYAFMAFRSGVPIRRLATIASNDADSDVASDKAVGAKEVAAMALAEAASGTPSTMSPTLIGLLMRQYSPAGVIELVITVSVAFMFHRWTSVY 327 M ++ A N +L AH+AF A RSG + L D + +E AA ALA + + P +S I LMR +SP G+IEL++T++ M HR+TS Y Sbjct: 325 MGFVAARACNNQLLAAHFAFGAMRSGANVGMLL---------DALAPSQPETREAAAFALARSIAKPPVELSNDQIAGLMRGHSPVGIIELIVTLATFTMLHRYTSTY 423 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7163.17076.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7163.17076.1 >prot_M-pyrifera_M_contig7163.17076.1 ID=prot_M-pyrifera_M_contig7163.17076.1|Name=mRNA_M-pyrifera_M_contig7163.17076.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=113bp MCYICATNAGNNILRAHYAFMAFRSGVPIRRLATIASNDADSDVASDKAVback to top mRNA from alignment at M-pyrifera_M_contig7163:12693..13034- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7163.17076.1 ID=mRNA_M-pyrifera_M_contig7163.17076.1|Name=mRNA_M-pyrifera_M_contig7163.17076.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=342bp|location=Sequence derived from alignment at M-pyrifera_M_contig7163:12693..13034- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7163:12693..13034- >mRNA_M-pyrifera_M_contig7163.17076.1 ID=mRNA_M-pyrifera_M_contig7163.17076.1|Name=mRNA_M-pyrifera_M_contig7163.17076.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=678bp|location=Sequence derived from alignment at M-pyrifera_M_contig7163:12693..13034- (Macrocystis pyrifera P11B4 male)back to top |