mRNA_M-pyrifera_M_contig71449.17035.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig71449.17035.1 vs. uniprot
Match: A0A0D2ND78_9CHLO (RING-type domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2ND78_9CHLO) HSP 1 Score: 72.4 bits (176), Expect = 2.080e-12 Identity = 30/60 (50.00%), Postives = 39/60 (65.00%), Query Frame = 1 Query: 178 CPICQSAPIRPVALRPCDHIFCEDCIAEWVERSGNCPTCRAQLEDDAPALIYGDGRGTFV 357 CPIC+ AP P+ L C H+FCEDC+AEW+ER CP CR ++ P L +GDG T + Sbjct: 326 CPICRDAPTAPIRL-DCSHVFCEDCLAEWLEREPTCPMCRCNVKP--PGLNFGDGSTTLL 382
BLAST of mRNA_M-pyrifera_M_contig71449.17035.1 vs. uniprot
Match: D8M8E8_BLAHO (RING-type domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M8E8_BLAHO) HSP 1 Score: 68.9 bits (167), Expect = 1.280e-11 Identity = 36/102 (35.29%), Postives = 55/102 (53.92%), Query Frame = 1 Query: 67 RLFLVLHSCFFPALSWRRRLSPEDLLSRAQSNETDPICPICQSAPIRPVALRPCDHIFCEDCIAEWVERSGNCPTCRAQLEDDAPALIYGDGRGTFVLTVAW 372 +LF ++ S F L + +R+S ++ + E + CPIC P L PCDH+FCE CIA+W+E + CP CR++L I+G+G + V W Sbjct: 140 KLFKMIISLFTSNLMYGKRISVQEAMQ-----EGNACCPICMETVKYPTKL-PCDHVFCETCIAQWLETNQTCPVCRSKLNRSGD-WIHGNGSRSNVFLFIW 234
BLAST of mRNA_M-pyrifera_M_contig71449.17035.1 vs. uniprot
Match: A0A2J7ZW35_9CHLO (RING finger and transmembrane domain-containing protein 1 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZW35_9CHLO) HSP 1 Score: 69.7 bits (169), Expect = 2.070e-11 Identity = 44/102 (43.14%), Postives = 56/102 (54.90%), Query Frame = 1 Query: 1 FRMAFAWSYLGLKAAALLLLLRRLFLVLHSCFFPALSWRRRLSPEDLLSRAQSNETDPI--CPICQSAPIRPVALRPCDHIFCEDCIAEWVERSGNCPTCRA 300 F FA YL LKA+A+L LR L+L L + + RR + R +++ET CP+CQ PV L C HIFCE+CI EW+ER CP CRA Sbjct: 330 FASTFAGFYLTLKASAVLSRLRLLWLALRT------ATRRGALYGTYMRRDEASETGTFGACPVCQDPVTTPVRL-DCGHIFCEECILEWLERDRTCPLCRA 424
BLAST of mRNA_M-pyrifera_M_contig71449.17035.1 vs. uniprot
Match: A0A0D2L643_9CHLO (RING-type domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2L643_9CHLO) HSP 1 Score: 69.3 bits (168), Expect = 2.730e-11 Identity = 29/62 (46.77%), Postives = 37/62 (59.68%), Query Frame = 1 Query: 172 PICPICQSAPIRPVALRPCDHIFCEDCIAEWVERSGNCPTCRAQLEDDAPALIYGDGRGTFV 357 P+CPICQ P+ L C H+FCEDC+AEW+ER CP CR ++ P GDG T + Sbjct: 353 PVCPICQDPCAAPIRL-DCSHVFCEDCLAEWLEREPTCPMCRCNVKP--PGFTLGDGSTTLL 411
BLAST of mRNA_M-pyrifera_M_contig71449.17035.1 vs. uniprot
Match: UPI001F03EAF1 (E3 ubiquitin-protein ligase RNFT1-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F03EAF1) HSP 1 Score: 67.8 bits (164), Expect = 9.590e-11 Identity = 28/54 (51.85%), Postives = 36/54 (66.67%), Query Frame = 1 Query: 145 SRAQSNETDPICPICQSAPIRPVALRPCDHIFCEDCIAEWVERSGNCPTCRAQL 306 S+ Q N+ CPICQ RP++LR C HIFCEDCI+ W +R CP CRA++ Sbjct: 351 SKEQINKLGNTCPICQEEFCRPISLRGCRHIFCEDCISLWFDREQTCPLCRAKV 404
BLAST of mRNA_M-pyrifera_M_contig71449.17035.1 vs. uniprot
Match: A0A3M7A401_HORWE (RING-type domain-containing protein n=8 Tax=Hortaea werneckii TaxID=91943 RepID=A0A3M7A401_HORWE) HSP 1 Score: 65.1 bits (157), Expect = 5.710e-10 Identity = 27/60 (45.00%), Postives = 35/60 (58.33%), Query Frame = 1 Query: 127 SPEDLLSRAQSNETDPICPICQSAPIRPVALRPCDHIFCEDCIAEWVERSGNCPTCRAQL 306 +PEDL + N CPIC P PC HI+C +C+ W+ER+ NCPTCRA+L Sbjct: 34 TPEDLSRLTEGNPDSDSCPICYQTFTEPTKT-PCGHIYCRECLEAWLERTNNCPTCRARL 92
BLAST of mRNA_M-pyrifera_M_contig71449.17035.1 vs. uniprot
Match: A0A7S2S9Z2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S9Z2_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 6.240e-10 Identity = 41/112 (36.61%), Postives = 57/112 (50.89%), Query Frame = 1 Query: 13 FAWSYLGLKAAALLLLLRRLFLVLHSCFFPALSWRRRLSPEDLLSRAQSNETDPICPICQSAPIRPVALRPCDHIFCEDCIAEWVERSGNCPTCRAQLEDDAPALIYGDGRG 348 F YL LKA L+ LFL++ + L R S +++ A++ D CPIC + PV L PC H+FCE+C+ EW+ER CP CRA D + + RG Sbjct: 311 FLGVYLCLKAMVASSYLKVLFLMVKASLTTDLEIGRLASSQEV---AEAGHPD--CPICYDEMVSPVLL-PCGHLFCEECVLEWLEREKTCPLCRA---DTPTSPLLASSRG 413
BLAST of mRNA_M-pyrifera_M_contig71449.17035.1 vs. uniprot
Match: UPI001263A689 (RING finger and transmembrane domain-containing protein 2-like n=3 Tax=Anacardiaceae TaxID=4011 RepID=UPI001263A689) HSP 1 Score: 64.3 bits (155), Expect = 1.600e-9 Identity = 32/63 (50.79%), Postives = 37/63 (58.73%), Query Frame = 1 Query: 154 QSNETDPICPICQSAPIRPVALRPCDHIFCEDCIAEWVERSGNCPTCRAQLEDDAPALIYGDG 342 Q N +C ICQ PV LR C HIFCEDC++EW+ER CP CRA L A +GDG Sbjct: 371 QVNAAGDLCAICQEKMHVPVLLR-CKHIFCEDCVSEWLERERTCPLCRA-LVKAADLRSFGDG 431
BLAST of mRNA_M-pyrifera_M_contig71449.17035.1 vs. uniprot
Match: A0A482SDI8_9ARCH (RING-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDI8_9ARCH) HSP 1 Score: 62.8 bits (151), Expect = 2.990e-9 Identity = 28/64 (43.75%), Postives = 40/64 (62.50%), Query Frame = 1 Query: 151 AQSNETDPI-----CPICQSAPIRPVALRPCDHIFCEDCIAEWVERSGNCPTCRAQLEDDAPAL 327 A+++E DP+ CPIC +P + V L C HIFCE C+ EW+E+ CP CR +++ A AL Sbjct: 175 ARTSEYDPLTSTYDCPICFDSPKKAVVLN-CSHIFCEQCVYEWLEKEKTCPVCRQEVQSAAQAL 237
BLAST of mRNA_M-pyrifera_M_contig71449.17035.1 vs. uniprot
Match: A0A445B634_ARAHY (RING-type domain-containing protein n=5 Tax=Arachis TaxID=3817 RepID=A0A445B634_ARAHY) HSP 1 Score: 63.5 bits (153), Expect = 3.040e-9 Identity = 28/66 (42.42%), Postives = 39/66 (59.09%), Query Frame = 1 Query: 145 SRAQSNETDPICPICQSAPIRPVALRPCDHIFCEDCIAEWVERSGNCPTCRAQLEDDAPALIYGDG 342 ++ Q +C ICQ P+ L C H+FCE+C++EW+ER CP CRA ++ A L YGDG Sbjct: 414 TKEQVKSAGDMCAICQEKMRAPLLLH-CKHLFCEECVSEWLERERTCPLCRANVKS-ADLLTYGDG 477 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig71449.17035.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig71449.17035.1 >prot_M-pyrifera_M_contig71449.17035.1 ID=prot_M-pyrifera_M_contig71449.17035.1|Name=mRNA_M-pyrifera_M_contig71449.17035.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=123bp MAFAWSYLGLKAAALLLLLRRLFLVLHSCFFPALSWRRRLSPEDLLSRAQback to top mRNA from alignment at M-pyrifera_M_contig71449:768..1142- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig71449.17035.1 ID=mRNA_M-pyrifera_M_contig71449.17035.1|Name=mRNA_M-pyrifera_M_contig71449.17035.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=375bp|location=Sequence derived from alignment at M-pyrifera_M_contig71449:768..1142- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig71449:768..1142- >mRNA_M-pyrifera_M_contig71449.17035.1 ID=mRNA_M-pyrifera_M_contig71449.17035.1|Name=mRNA_M-pyrifera_M_contig71449.17035.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=738bp|location=Sequence derived from alignment at M-pyrifera_M_contig71449:768..1142- (Macrocystis pyrifera P11B4 male)back to top |