prot_M-pyrifera_M_contig71449.17035.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig71449.17035.1
Unique Nameprot_M-pyrifera_M_contig71449.17035.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length123
Homology
BLAST of mRNA_M-pyrifera_M_contig71449.17035.1 vs. uniprot
Match: A0A0D2ND78_9CHLO (RING-type domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2ND78_9CHLO)

HSP 1 Score: 72.4 bits (176), Expect = 1.950e-12
Identity = 30/60 (50.00%), Postives = 39/60 (65.00%), Query Frame = 0
Query:   58 CPICQSAPIRPVALRPCDHIFCEDCIAEWVERSGNCPTCRAQLEDDAPALIYGDGRGTFV 117
            CPIC+ AP  P+ L  C H+FCEDC+AEW+ER   CP CR  ++   P L +GDG  T +
Sbjct:  326 CPICRDAPTAPIRL-DCSHVFCEDCLAEWLEREPTCPMCRCNVKP--PGLNFGDGSTTLL 382          
BLAST of mRNA_M-pyrifera_M_contig71449.17035.1 vs. uniprot
Match: D8M8E8_BLAHO (RING-type domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M8E8_BLAHO)

HSP 1 Score: 68.9 bits (167), Expect = 1.200e-11
Identity = 36/102 (35.29%), Postives = 55/102 (53.92%), Query Frame = 0
Query:   21 RLFLVLHSCFFPALSWRRRLSPEDLLSRAQSNETDPICPICQSAPIRPVALRPCDHIFCEDCIAEWVERSGNCPTCRAQLEDDAPALIYGDGRGTFVLTVAW 122
            +LF ++ S F   L + +R+S ++ +      E +  CPIC      P  L PCDH+FCE CIA+W+E +  CP CR++L       I+G+G  + V    W
Sbjct:  140 KLFKMIISLFTSNLMYGKRISVQEAMQ-----EGNACCPICMETVKYPTKL-PCDHVFCETCIAQWLETNQTCPVCRSKLNRSGD-WIHGNGSRSNVFLFIW 234          
BLAST of mRNA_M-pyrifera_M_contig71449.17035.1 vs. uniprot
Match: A0A0D2L643_9CHLO (RING-type domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2L643_9CHLO)

HSP 1 Score: 69.3 bits (168), Expect = 2.550e-11
Identity = 29/62 (46.77%), Postives = 37/62 (59.68%), Query Frame = 0
Query:   56 PICPICQSAPIRPVALRPCDHIFCEDCIAEWVERSGNCPTCRAQLEDDAPALIYGDGRGTFV 117
            P+CPICQ     P+ L  C H+FCEDC+AEW+ER   CP CR  ++   P    GDG  T +
Sbjct:  353 PVCPICQDPCAAPIRL-DCSHVFCEDCLAEWLEREPTCPMCRCNVKP--PGFTLGDGSTTLL 411          
BLAST of mRNA_M-pyrifera_M_contig71449.17035.1 vs. uniprot
Match: A0A2J7ZW35_9CHLO (RING finger and transmembrane domain-containing protein 1 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZW35_9CHLO)

HSP 1 Score: 68.9 bits (167), Expect = 3.610e-11
Identity = 43/98 (43.88%), Postives = 55/98 (56.12%), Query Frame = 0
Query:    3 FAWSYLGLKAAALLLLLRRLFLVLHSCFFPALSWRRRLSPEDLLSRAQSNETDPI--CPICQSAPIRPVALRPCDHIFCEDCIAEWVERSGNCPTCRA 98
            FA  YL LKA+A+L  LR L+L L +      + RR       + R +++ET     CP+CQ     PV L  C HIFCE+CI EW+ER   CP CRA
Sbjct:  334 FAGFYLTLKASAVLSRLRLLWLALRT------ATRRGALYGTYMRRDEASETGTFGACPVCQDPVTTPVRL-DCGHIFCEECILEWLERDRTCPLCRA 424          
BLAST of mRNA_M-pyrifera_M_contig71449.17035.1 vs. uniprot
Match: UPI001F03EAF1 (E3 ubiquitin-protein ligase RNFT1-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F03EAF1)

HSP 1 Score: 67.8 bits (164), Expect = 8.990e-11
Identity = 28/54 (51.85%), Postives = 36/54 (66.67%), Query Frame = 0
Query:   47 SRAQSNETDPICPICQSAPIRPVALRPCDHIFCEDCIAEWVERSGNCPTCRAQL 100
            S+ Q N+    CPICQ    RP++LR C HIFCEDCI+ W +R   CP CRA++
Sbjct:  351 SKEQINKLGNTCPICQEEFCRPISLRGCRHIFCEDCISLWFDREQTCPLCRAKV 404          
BLAST of mRNA_M-pyrifera_M_contig71449.17035.1 vs. uniprot
Match: A0A3M7A401_HORWE (RING-type domain-containing protein n=8 Tax=Hortaea werneckii TaxID=91943 RepID=A0A3M7A401_HORWE)

HSP 1 Score: 65.1 bits (157), Expect = 5.360e-10
Identity = 27/60 (45.00%), Postives = 35/60 (58.33%), Query Frame = 0
Query:   41 SPEDLLSRAQSNETDPICPICQSAPIRPVALRPCDHIFCEDCIAEWVERSGNCPTCRAQL 100
            +PEDL    + N     CPIC      P    PC HI+C +C+  W+ER+ NCPTCRA+L
Sbjct:   34 TPEDLSRLTEGNPDSDSCPICYQTFTEPTKT-PCGHIYCRECLEAWLERTNNCPTCRARL 92          
BLAST of mRNA_M-pyrifera_M_contig71449.17035.1 vs. uniprot
Match: A0A7S2S9Z2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S9Z2_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 5.850e-10
Identity = 41/112 (36.61%), Postives = 57/112 (50.89%), Query Frame = 0
Query:    3 FAWSYLGLKAAALLLLLRRLFLVLHSCFFPALSWRRRLSPEDLLSRAQSNETDPICPICQSAPIRPVALRPCDHIFCEDCIAEWVERSGNCPTCRAQLEDDAPALIYGDGRG 114
            F   YL LKA      L+ LFL++ +     L   R  S +++   A++   D  CPIC    + PV L PC H+FCE+C+ EW+ER   CP CRA   D   + +    RG
Sbjct:  311 FLGVYLCLKAMVASSYLKVLFLMVKASLTTDLEIGRLASSQEV---AEAGHPD--CPICYDEMVSPVLL-PCGHLFCEECVLEWLEREKTCPLCRA---DTPTSPLLASSRG 413          
BLAST of mRNA_M-pyrifera_M_contig71449.17035.1 vs. uniprot
Match: UPI001263A689 (RING finger and transmembrane domain-containing protein 2-like n=3 Tax=Anacardiaceae TaxID=4011 RepID=UPI001263A689)

HSP 1 Score: 64.3 bits (155), Expect = 1.500e-9
Identity = 32/63 (50.79%), Postives = 37/63 (58.73%), Query Frame = 0
Query:   50 QSNETDPICPICQSAPIRPVALRPCDHIFCEDCIAEWVERSGNCPTCRAQLEDDAPALIYGDG 112
            Q N    +C ICQ     PV LR C HIFCEDC++EW+ER   CP CRA L   A    +GDG
Sbjct:  371 QVNAAGDLCAICQEKMHVPVLLR-CKHIFCEDCVSEWLERERTCPLCRA-LVKAADLRSFGDG 431          
BLAST of mRNA_M-pyrifera_M_contig71449.17035.1 vs. uniprot
Match: A0A482SDI8_9ARCH (RING-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDI8_9ARCH)

HSP 1 Score: 62.8 bits (151), Expect = 2.810e-9
Identity = 28/64 (43.75%), Postives = 40/64 (62.50%), Query Frame = 0
Query:   49 AQSNETDPI-----CPICQSAPIRPVALRPCDHIFCEDCIAEWVERSGNCPTCRAQLEDDAPAL 107
            A+++E DP+     CPIC  +P + V L  C HIFCE C+ EW+E+   CP CR +++  A AL
Sbjct:  175 ARTSEYDPLTSTYDCPICFDSPKKAVVLN-CSHIFCEQCVYEWLEKEKTCPVCRQEVQSAAQAL 237          
BLAST of mRNA_M-pyrifera_M_contig71449.17035.1 vs. uniprot
Match: A0A445B634_ARAHY (RING-type domain-containing protein n=5 Tax=Arachis TaxID=3817 RepID=A0A445B634_ARAHY)

HSP 1 Score: 63.5 bits (153), Expect = 2.850e-9
Identity = 28/66 (42.42%), Postives = 39/66 (59.09%), Query Frame = 0
Query:   47 SRAQSNETDPICPICQSAPIRPVALRPCDHIFCEDCIAEWVERSGNCPTCRAQLEDDAPALIYGDG 112
            ++ Q      +C ICQ     P+ L  C H+FCE+C++EW+ER   CP CRA ++  A  L YGDG
Sbjct:  414 TKEQVKSAGDMCAICQEKMRAPLLLH-CKHLFCEECVSEWLERERTCPLCRANVKS-ADLLTYGDG 477          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig71449.17035.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2ND78_9CHLO1.950e-1250.00RING-type domain-containing protein n=1 Tax=Monora... [more]
D8M8E8_BLAHO1.200e-1135.29RING-type domain-containing protein n=1 Tax=Blasto... [more]
A0A0D2L643_9CHLO2.550e-1146.77RING-type domain-containing protein n=1 Tax=Monora... [more]
A0A2J7ZW35_9CHLO3.610e-1143.88RING finger and transmembrane domain-containing pr... [more]
UPI001F03EAF18.990e-1151.85E3 ubiquitin-protein ligase RNFT1-like n=1 Tax=Xen... [more]
A0A3M7A401_HORWE5.360e-1045.00RING-type domain-containing protein n=8 Tax=Hortae... [more]
A0A7S2S9Z2_9STRA5.850e-1036.61Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
UPI001263A6891.500e-950.79RING finger and transmembrane domain-containing pr... [more]
A0A482SDI8_9ARCH2.810e-943.75RING-type domain-containing protein n=1 Tax=archae... [more]
A0A445B634_ARAHY2.850e-942.42RING-type domain-containing protein n=5 Tax=Arachi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 58..96
e-value: 4.3E-6
score: 36.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 58..97
score: 12.947
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 36..108
e-value: 1.3E-17
score: 65.7
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 55..101
e-value: 1.0E-10
score: 41.3
NoneNo IPR availablePANTHERPTHR15860UNCHARACTERIZED RING FINGER-CONTAINING PROTEINcoord: 5..100
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 38..122
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..37
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 57..102
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 74..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig71449contigM-pyrifera_M_contig71449:768..1136 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig71449.17035.1mRNA_M-pyrifera_M_contig71449.17035.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig71449 768..1142 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig71449.17035.1 ID=prot_M-pyrifera_M_contig71449.17035.1|Name=mRNA_M-pyrifera_M_contig71449.17035.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=123bp
MAFAWSYLGLKAAALLLLLRRLFLVLHSCFFPALSWRRRLSPEDLLSRAQ
SNETDPICPICQSAPIRPVALRPCDHIFCEDCIAEWVERSGNCPTCRAQL
EDDAPALIYGDGRGTFVLTVAW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS