mRNA_M-pyrifera_M_contig70771.16894.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig70771.16894.1 vs. uniprot
Match: A0A251MQR1_PRUPE (DYW_deaminase domain-containing protein n=7 Tax=Prunus TaxID=3754 RepID=A0A251MQR1_PRUPE) HSP 1 Score: 62.0 bits (149), Expect = 4.650e-8 Identity = 50/156 (32.05%), Postives = 79/156 (50.64%), Query Frame = 1 Query: 16 AASVVGW---MREEGVEVDEDTVCSLLQAC---GVAKNAEAATAILTELRGVEGSDVVGSSFLWALVKSGEVKKAAQVFAEIVALDKVDVDATLATPLISGLGDVGDAEGALEVFRSLKRLGAEADVVAYTAAITACGKAGMVEMAQRLFSEMRSI 465 AA VG+ MR G+ D+ TV SLL+AC G+ K AE ++T+ G+ + V + L K G + + +VF E+ DKV A LA + G G A+E+F + ++G E D V +T ++AC +G+V+ + F M + Sbjct: 253 AADGVGYFNLMRRAGINPDDGTVLSLLEACENLGLQKLAEGVHGLITKC-GLYANATVATGLLDLYAKLGRLNYSLKVFGEVNNPDKVAWTAMLAGNAVHGNG-----REAMELFEGMVKVGVEPDHVTFTHLLSACSHSGLVKEGKNYFDIMSQV 402
BLAST of mRNA_M-pyrifera_M_contig70771.16894.1 vs. uniprot
Match: A0A067L0G7_JATCU (DYW_deaminase domain-containing protein n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067L0G7_JATCU) HSP 1 Score: 61.6 bits (148), Expect = 6.640e-8 Identity = 50/161 (31.06%), Postives = 78/161 (48.45%), Query Frame = 1 Query: 1 GELEQAASVVGWMREEGVEVDEDTVCSLLQACGVAKNAEAATAILTELRGVEGSDV---------VGSSFLWALVKSGEVKKAAQVFAEIVALDKVDVDATLATPLISGLGDVGDAEGALEVFRSLKRLGAEADVVAYTAAITACGKAGMVEMAQRLFSEM 456 G+ E A + M +EGVE +E T S++ AC V TA + + + + V S+ + K G+++ A++VF D V ++ ++SG G ALEVF+ ++RL E D V +T +TAC AG+VE QR F+ M Sbjct: 485 GDTEGAVKIFIQMAKEGVEPNEYTFSSVINACAVP------TAAVEQGKPFHAWSIKSRFNDALCVSSALVTMYAKRGDIESASEVFKRQEVRDIVSWNS-----MVSGYAQHGHGTKALEVFKEMQRLKLELDDVTFTGVLTACTHAGLVEEGQRHFNIM 634
BLAST of mRNA_M-pyrifera_M_contig70771.16894.1 vs. uniprot
Match: UPI0002C363F9 (pentatricopeptide repeat-containing protein At1g09190 n=1 Tax=Fragaria vesca subsp. vesca TaxID=101020 RepID=UPI0002C363F9) HSP 1 Score: 61.2 bits (147), Expect = 8.020e-8 Identity = 50/174 (28.74%), Postives = 83/174 (47.70%), Query Frame = 1 Query: 13 QAASVVGWMREEGVEVDEDTVCSLLQACGVAKNAEAATAI--LTELRGVEGSDV-VGSSFLWALVKSGEVKKAAQVFAEIVALDKVDVDATLATPLISGLGDVGDAEGALEVFRSLKRLGAEADVVAYTAAITACGKAGMVEMAQRLFSEMRSIPEMDITVEAANATLHAIARS 525 +A V MREEG E+DE TV S+L ACG E I T+ +G+ G V VG++ + K G++ A VF + + V + + +G G++G +E+F + + + + A+T C AG+VE + LF+ M I ++ +E + + RS Sbjct: 223 EAVEVFNEMREEGFEIDEATVVSVLPACGQLGAVEVGKWIHLYTDSKGLIGEVVSVGNAVVSFYCKCGDLDAACSVFKGMARKNVVSWNTLILGYAFNGRGELG-----IELFEEMMNADEKPNEATFVGALTCCTHAGLVEKGRDLFASMTEIHGIEPKLEHYGCMVDVLGRS 391
BLAST of mRNA_M-pyrifera_M_contig70771.16894.1 vs. uniprot
Match: A0A4Y1RY99_PRUDU (Tetratricopeptide repeat-like superfamily protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RY99_PRUDU) HSP 1 Score: 59.3 bits (142), Expect = 9.320e-8 Identity = 46/136 (33.82%), Postives = 70/136 (51.47%), Query Frame = 1 Query: 37 MREEGVEVDEDTVCSLLQAC------GVAKNAEAATAILTELRGVEGSDVVGSSFLWALVKSGEVKKAAQVFAEIVALDKVDVDATLATPLISGLGDVGDAEGALEVFRSLKRLGAEADVVAYTAAITACGKAGMV 426 M ++GVEV++ TV S+L+AC GV + + E RG+ V S+ + K G ++ A QVF +I VD D T +ISGL G + A+++FR ++ G + D TA ++AC AG V Sbjct: 1 MVDDGVEVNDATVVSVLRACAETGALGVGRRVHG----VVEGRGIGLKANVNSALIDMYAKCGCIRSARQVFDDI-----VDKDVFAWTAMISGLASHGHCQDAIDLFRKMQGFGIKPDERTMTAVLSACRNAGQV 127
BLAST of mRNA_M-pyrifera_M_contig70771.16894.1 vs. uniprot
Match: A0A1U8B5S9_NELNU (pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8B5S9_NELNU) HSP 1 Score: 60.1 bits (144), Expect = 2.110e-7 Identity = 49/163 (30.06%), Postives = 83/163 (50.92%), Query Frame = 1 Query: 10 EQAASVVGWMREEGVEVDEDTVCSLLQACG---VAKNAEAATAILTELRGVEGSDVVGSSFLWALVKSGEVKKAAQVFAEIVALDKVDVDATLATPLISGLGDVGDAEGALEVFRSLKR-LGAEADVVAYTAAITACGKAGMVEMAQRLFSEMRSI---PEMD 477 E+A + MR G++V T S+L ACG + + A++T++ G EG+ + SS + K G + +A +F + V + + L T +I+G G LE+F L GA D++ +TA +TAC AG+++ A F++M+ PE+D Sbjct: 280 EEALKLFVKMRGSGLDVTYHTFSSILNACGSLTIIQQGRQIHALITKM-GSEGNVFIASSLIDMYSKCGSIDEARCIFDQTVKRNNI-----LWTSMITGYAQSGRGAEGLELFELLVNGEGARPDLICFTAVLTACNHAGLLDRAIYYFNKMKDYGLSPELD 436
BLAST of mRNA_M-pyrifera_M_contig70771.16894.1 vs. uniprot
Match: A0A6A6MQN7_HEVBR (Uncharacterized protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6MQN7_HEVBR) HSP 1 Score: 58.9 bits (141), Expect = 5.170e-7 Identity = 50/152 (32.89%), Postives = 77/152 (50.66%), Query Frame = 1 Query: 13 QAASVVGWMREEGVEVDEDTVCSLLQACGVAKNAEAATAILTELRGVEGSDVV--GSSFLWALVKSGEVKKAAQVFAEIVALDKVDVDATLATPLISGLGDVGDAEGALEVFRSLKRLGAEADVVAYTAAITACGKAGMVEMAQRLFSEMRS 462 QA +++ M+ E VE DE T+ + L ACG E I + + E S V ++ + KSG +KKA +VF + + T +ISGL G ALE+F ++R + + V + A ++AC AG+V++ Q FS MRS Sbjct: 237 QAIAILRRMQLENVEPDEITMLAALSACGHLGALELGEWIHSYIDKHELSRTVPLNNALIDMYAKSGNIKKALKVFENMKRKSIITW-----TTMISGLALHGLGREALELFSCMERARVKPNDVTFIAILSACSHAGLVQIGQSFFSNMRS 383
BLAST of mRNA_M-pyrifera_M_contig70771.16894.1 vs. uniprot
Match: UPI001CC4D885 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC4D885) HSP 1 Score: 56.2 bits (134), Expect = 4.520e-6 Identity = 42/156 (26.92%), Postives = 77/156 (49.36%), Query Frame = 1 Query: 1 GELEQAASVVGWMREEGVEVDEDTVCSLLQACGVAKNAEAATAI--LTELRGVEGSDVVGSSFLWALVKSGEVKKAAQVFAEIVALDKVDVDATLATPLISGLGDVGDAEGALEVFRSLKRLGAEADVVAYTAAITACGKAGMVEMAQRLFSEMRS 462 G +A + MR E ++ ++ T+ S L +C + E I E G+ + V ++ + K G ++KA QVF +++ D V ++ +I GL G AE A+ ++ +K + + + + + +TAC AG+VE+ + F MRS Sbjct: 327 GRPNEALELFDLMRSENIQPNDVTLVSALSSCAQMGSVEDGERIGSYIESEGLTLNVYVCAALIDMYAKCGNIRKARQVFDQVIHRDIVSWNS-----IIGGLAINGFAEDAIALYDKMKETEVKPNDITFVSLLTACTHAGLVELGLKFFKSMRS 477
BLAST of mRNA_M-pyrifera_M_contig70771.16894.1 vs. uniprot
Match: A0A6J1AC37_9ROSI (pentatricopeptide repeat-containing protein At5g40410, mitochondrial n=3 Tax=Byttnerioideae TaxID=214909 RepID=A0A6J1AC37_9ROSI) HSP 1 Score: 55.8 bits (133), Expect = 6.100e-6 Identity = 42/158 (26.58%), Postives = 80/158 (50.63%), Query Frame = 1 Query: 1 GELEQAASVVGWMREEGVEVDEDTVCSLLQAC---GVAKNAEAATAILTELRGVEGSDVVGSSFLWALVKSGEVKKAAQVFAEIVALDKVDVDATLATPLISGLGDVGDAEGALEVFRSLKRLGAEADVVAYTAAITACGKAGMVEMAQRLFSEMRSI 465 G E++ + MR GVE D+ T+ ++LQAC GV A + ++ G+ + + ++ L K G + +++VF EI +D D T +++G G + A+++F+ + + G + D V +T ++AC +G+V +R F M + Sbjct: 233 GLAEESMGIFIMMRRAGVEFDQATMLTVLQACENLGVRNLAGSIHGLILSF-GITANVTIATALLNLYSKLGCLHASSKVFGEI-----IDPDNVAWTAMLAGYAVHGHGKDAIKLFQIMVKKGVQPDHVTFTHLLSACSHSGLVNEGKRYFKIMSEV 384
BLAST of mRNA_M-pyrifera_M_contig70771.16894.1 vs. uniprot
Match: A0A2N9ENZ2_FAGSY (DYW_deaminase domain-containing protein n=5 Tax=Fagaceae TaxID=3503 RepID=A0A2N9ENZ2_FAGSY) HSP 1 Score: 55.5 bits (132), Expect = 8.310e-6 Identity = 40/148 (27.03%), Postives = 79/148 (53.38%), Query Frame = 1 Query: 52 VEVDEDTVCSLLQACGVAKNAEAATAILTEL--RGVEGSDVVGSSFLWALVKSGEVKKAAQVFAEIVALDKVDVDATLATPLISGLGDVGDAEGALEVFRSLKRLGAEADVVAYTAAITACGKAGMVEMAQRLFSEMRSIPEMDITVE 489 ++ D + S L AC + + I T + G+E ++G + VK G++++A +VF + L+K + A T +I+G G + AL+ F ++ G + +++ +TA +TAC AG+V+ + LF M ++ +++ T+E Sbjct: 266 IKPDNVALVSSLSACARLGSLDQGRWIHTYIDKNGIEIDPILGCVLIDMYVKCGDMEEALKVFRK---LEKKGISAW--TAIINGFAIHGQGQEALDWFMQMQEAGIKPNLITFTAILTACSHAGLVDEGKLLFKSMMTVYKLNPTIE 408
BLAST of mRNA_M-pyrifera_M_contig70771.16894.1 vs. uniprot
Match: B8LQA8_PICSI (DYW_deaminase domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=B8LQA8_PICSI) HSP 1 Score: 55.5 bits (132), Expect = 8.620e-6 Identity = 44/144 (30.56%), Postives = 68/144 (47.22%), Query Frame = 1 Query: 37 MREEGVEVDEDTVCSLLQACGVAKNAEAATAI--LTELRGVEGSDVVGSSFLWALVKSGEVKKAAQVFAEIVALDKVDVDATLATPLISGLGDVGDAEGALEVFRSLKRLGAEADVVAYTAAITACGKAGMVEMAQRLFSEMRS 462 M+ +G++ D + S+L AC E I T G E + VVG+ + K G V A ++F + D V T +I G G E AL +F ++ G + D +A+TA +TAC AG+V+ + F M+S Sbjct: 414 MQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSW-----TTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKS 552 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70771.16894.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig70771.16894.1 >prot_M-pyrifera_M_contig70771.16894.1 ID=prot_M-pyrifera_M_contig70771.16894.1|Name=mRNA_M-pyrifera_M_contig70771.16894.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=175bp GELEQAASVVGWMREEGVEVDEDTVCSLLQACGVAKNAEAATAILTELRGback to top mRNA from alignment at M-pyrifera_M_contig70771:31..600- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig70771.16894.1 ID=mRNA_M-pyrifera_M_contig70771.16894.1|Name=mRNA_M-pyrifera_M_contig70771.16894.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=570bp|location=Sequence derived from alignment at M-pyrifera_M_contig70771:31..600- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig70771:31..600- >mRNA_M-pyrifera_M_contig70771.16894.1 ID=mRNA_M-pyrifera_M_contig70771.16894.1|Name=mRNA_M-pyrifera_M_contig70771.16894.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1050bp|location=Sequence derived from alignment at M-pyrifera_M_contig70771:31..600- (Macrocystis pyrifera P11B4 male)back to top |