mRNA_M-pyrifera_M_contig70768.16892.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig70768.16892.1 vs. uniprot
Match: A0A7S1C963_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C963_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 1.810e-15 Identity = 45/102 (44.12%), Postives = 63/102 (61.76%), Query Frame = 1 Query: 31 LHCILHTILFNRSYGLVTPVMVSGVGELGVGYPRIGNEEIGIAVGAAVRRCLASLETVGPNLSRGRLCLGFYTRYKRKSMLGLTSELERVFFERWNVRLLVD 336 L +LHTILF+R+ G VTPV V+ L V + R G+ ++ AV V R ASL VGP+L+R L L FY ++KS G+T ERV++E W++ LV+ Sbjct: 22 LRAVLHTILFSRALGPVTPVEVASP-LLDVAHVRCGSVDVDKAVEEGVERVRASLVPVGPDLARATLVLSFYEN-RKKSFFGITKSTERVYWEMWSLPCLVN 121
BLAST of mRNA_M-pyrifera_M_contig70768.16892.1 vs. uniprot
Match: A0A1E7F556_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F556_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 1.170e-11 Identity = 44/120 (36.67%), Postives = 64/120 (53.33%), Query Frame = 1 Query: 1 ECAADEASAALHCILHTILFNRSYGLVTPVMVSGVGELGVGYPRIG--------NEEIGIAVGAAVRRCLASLETVGPNLSRGRLCLGFYTRYKRKSMLGLTSELERVFFERWNVRLLVD 336 E A + AL IL+TILF RS G V+P V G + YPRI N ++ V +++ L L +GP L G L L F+ R K + + GL S ERV +E+W++R++V+ Sbjct: 12 ELATGQVREALQAILYTILFIRSPGPVSPRDVECEGFDFLTYPRIATSSSLSTLNYDVDKRVDQSIQNFLMKLSQIGPELLSGGLTLSFFERRKTQQLFGLVSNEERVVWEQWHLRVVVN 131
BLAST of mRNA_M-pyrifera_M_contig70768.16892.1 vs. uniprot
Match: A0A1Z5KIE0_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KIE0_FISSO) HSP 1 Score: 66.6 bits (161), Expect = 5.140e-11 Identity = 46/131 (35.11%), Postives = 63/131 (48.09%), Query Frame = 1 Query: 1 ECAADEASAALHCILHTILFNRSYGLVTPVMVSGVGELGVGYPRIGNE-------------------EIGIAVGAAVRRCLASLETVGPNLSRGRLCLGFYTRYKRKSMLGLTSELERVFFERWNVRLLVD 336 E + + +AL CILHTILF RS G VTP V + + Y RI N +I V A+ L +L +GP L G L + F+ R + + GL S ERV FE+W +RL+V+ Sbjct: 12 ELSTAQVRSALQCILHTILFLRSPGPVTPKDVE-CEDFNLTYARIANNHQNQPPNKAMGNIVHSLENDIDQKVDDAIESFLRTLSQIGPELLSGCLTVSFFERRATRQLFGLVSHEERVVFEQWVIRLVVN 141
BLAST of mRNA_M-pyrifera_M_contig70768.16892.1 vs. uniprot
Match: A0A1Z5KEC3_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KEC3_FISSO) HSP 1 Score: 64.7 bits (156), Expect = 1.520e-10 Identity = 45/131 (34.35%), Postives = 63/131 (48.09%), Query Frame = 1 Query: 1 ECAADEASAALHCILHTILFNRSYGLVTPVMVSGVGELGVGYPRIGNE-------------------EIGIAVGAAVRRCLASLETVGPNLSRGRLCLGFYTRYKRKSMLGLTSELERVFFERWNVRLLVD 336 E + + +AL CILHTILF RS G VTP V + + Y RI N +I V A+ L +L +GP L G L + F+ R + + GL S ERV FE+W +R++V+ Sbjct: 12 ELSTAQVRSALQCILHTILFLRSPGPVTPKDVE-CEDFNLTYARIANNHQNQPPNKAMGNIVHSLENDIDQKVDDAIESFLRTLSQIGPELLSGCLTVSFFERRATRQLFGLVSHEERVVFEQWVMRVVVN 141
BLAST of mRNA_M-pyrifera_M_contig70768.16892.1 vs. uniprot
Match: A0A7R9WVQ8_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WVQ8_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.100e-9 Identity = 45/126 (35.71%), Postives = 65/126 (51.59%), Query Frame = 1 Query: 1 ECAADEASAALHCILHTILFNRSYGLVTPVMVSGVGELGVGYPRIGNEE-----IGIA---------VGAAVRRCLASLETVGPNLSRGRLCLGFYTRYKRKSMLGLTSELERVFFERWNVRLLVD 336 E + AL IL+TILF RS G VTP V G + YPRI +++ +G++ V A+ L SL +GP L G L L F+ R + + GL S ERV +E+W++R +V+ Sbjct: 55 ELTTGQVREALQAILYTILFVRSPGPVTPHDVECEG-FNLTYPRISSDKSPSAPVGLSSLENDVDKKVDDAIELFLRSLSQIGPELLSGGLTLSFFERRATRQLFGLVSNEERVVWEQWHMRAVVN 179
BLAST of mRNA_M-pyrifera_M_contig70768.16892.1 vs. uniprot
Match: A0A7S1ZEN7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZEN7_TRICV) HSP 1 Score: 60.1 bits (144), Expect = 1.420e-8 Identity = 45/129 (34.88%), Postives = 63/129 (48.84%), Query Frame = 1 Query: 1 ECAADEASAALHCILHTILFNRSYGLVTPVMVSGVGELGVGYPRIGNEE---IGIAVGAAVRR--------------CLASLETVGPNLSRGRLCLGFYTRYKRKSMLGLTSELERVFFERWNVRLLVD 336 E A + AL ILHTILF RS G V P + G + Y RI N++ + + G AV + L SL +GP L G L L F+ R + + GL S ERV +E+W +R++V+ Sbjct: 12 ELATGQVREALQAILHTILFIRSPGPVAPRDIHCEG-FDLTYSRIANDDGNQVAVVSGPAVVQENDIDKKVDDSIEVFLRSLSQIGPELLSGCLTLSFFERRASRQLFGLVSHEERVVWEQWILRVVVN 139
BLAST of mRNA_M-pyrifera_M_contig70768.16892.1 vs. uniprot
Match: K0SBE9_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SBE9_THAOC) HSP 1 Score: 58.5 bits (140), Expect = 5.590e-8 Identity = 44/127 (34.65%), Postives = 59/127 (46.46%), Query Frame = 1 Query: 28 ALHCILHTILFNRSYGLVTPVMVSGVGELGVGYPRIGNEEI---GIAVGAAVRR---------------------CLASLETVGPNLSRGRLCLGFYTRYKRKSMLGLTSELERVFFERWNVRLLVD 336 AL ++HT+LF RS G V+P V G+ Y RI E GI G A RR L +L +GP L G L + F+ R +K + GL E+V FE+W VR+LV+ Sbjct: 21 ALAAVIHTVLFIRSPGPVSPFDVH-CESFGLTYTRIATENDPLHGIVTGGASRRQNKSTSSYQQLDRKVDGSIEEFLQTLTPIGPELMAGNLAISFFERRPKKQLFGLHITEEKVPFEQWIVRVLVN 146
BLAST of mRNA_M-pyrifera_M_contig70768.16892.1 vs. uniprot
Match: A0A7S4VM27_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VM27_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 1.610e-7 Identity = 45/134 (33.58%), Postives = 60/134 (44.78%), Query Frame = 1 Query: 1 ECAADEASAALHCILHTILFNRSYGLVTPVMVSGVGELGVGYPRIGNEE----------------------IGIAVGAAVRRCLASLETVGPNLSRGRLCLGFYTRYKRKSMLGLTSELERVFFERWNVRLLVD 336 E A + AL ILHTILF RS G V P V G + Y RI + + V A+ L SL +GP L G L LGF+ R + + GL S ERV +E+W +R++V+ Sbjct: 12 ELATGQVREALQAILHTILFIRSPGPVAPRDVHCEG-FDLTYTRIATNDGSSIRSDGGGRSISRSISIENDLDKKVDDAIEVFLRSLTQIGPELLSGCLTLGFFERRATRQLFGLVSHEERVVWEQWILRVVVN 144
BLAST of mRNA_M-pyrifera_M_contig70768.16892.1 vs. uniprot
Match: A0A812YBK7_9DINO (ATG101 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812YBK7_9DINO) HSP 1 Score: 56.2 bits (134), Expect = 7.330e-7 Identity = 40/104 (38.46%), Postives = 56/104 (53.85%), Query Frame = 1 Query: 31 LHCILHTILFNRSYGLVTPVMVSGVGEL-GVGYPRIGNEEIGIAVGAAVRRC-LASLETVGPNLSRGRLCLGFYTRYKRKSMLGLTSELERVFFERWNVRLLVD 336 L +LHTI+F+RS G+VTPV S EL + IG E+ +V AV + L SL+ P + G + L F+T+ S++GL R FE W + LVD Sbjct: 14 LRAVLHTIVFHRSLGVVTPVHESS--ELFQAQWCSIGMAEVSASVEDAVEQLSLDSLQPRSPTSAGGSVTLSFHTKTTVASLIGLGGTTLRKQFEEWRIPFLVD 115
BLAST of mRNA_M-pyrifera_M_contig70768.16892.1 vs. uniprot
Match: A0A7S2I1L3_9STRA (Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2I1L3_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 1.070e-6 Identity = 44/136 (32.35%), Postives = 60/136 (44.12%), Query Frame = 1 Query: 1 ECAADEASAALHCILHTILFNRSYGLVTPVMVSGVGELGVGYPRIGNEE------------------------IGIAVGAAVRRCLASLETVGPNLSRGRLCLGFYTRYKRKSMLGLTSELERVFFERWNVRLLVD 336 E A + AL ILHTILF RS G V P V+ G + Y RI + + V A+ L SL +GP L G L L F+ R + + GL S ERV +E+W +R++V+ Sbjct: 12 ELATGQVREALQAILHTILFIRSPGPVAPRDVNCEG-FDLTYNRIATNDGTPPTSTRSLDGRTISRSSSLENDVDKKVDGAIEVFLRSLTQIGPELLSGCLTLAFFERRATRQLFGLVSHEERVVWEQWILRVVVN 146 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70768.16892.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig70768.16892.1 >prot_M-pyrifera_M_contig70768.16892.1 ID=prot_M-pyrifera_M_contig70768.16892.1|Name=mRNA_M-pyrifera_M_contig70768.16892.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=112bp ECAADEASAALHCILHTILFNRSYGLVTPVMVSGVGELGVGYPRIGNEEIback to top mRNA from alignment at M-pyrifera_M_contig70768:178..583+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig70768.16892.1 ID=mRNA_M-pyrifera_M_contig70768.16892.1|Name=mRNA_M-pyrifera_M_contig70768.16892.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=406bp|location=Sequence derived from alignment at M-pyrifera_M_contig70768:178..583+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig70768:178..583+ >mRNA_M-pyrifera_M_contig70768.16892.1 ID=mRNA_M-pyrifera_M_contig70768.16892.1|Name=mRNA_M-pyrifera_M_contig70768.16892.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=672bp|location=Sequence derived from alignment at M-pyrifera_M_contig70768:178..583+ (Macrocystis pyrifera P11B4 male)back to top |