mRNA_M-pyrifera_M_contig68814.16544.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig68814.16544.1 vs. uniprot
Match: UPI001BB1F20D (serine/threonine-protein kinase Nek9-like isoform X1 n=2 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB1F20D) HSP 1 Score: 55.1 bits (131), Expect = 5.450e-7 Identity = 31/83 (37.35%), Postives = 45/83 (54.22%), Query Frame = 1
Query: 13 LSNAPVTQIAAGPLFSAIVTDQGHLITFGWNDFAVLGRGNVLASEDA---------SPLPE--FAEKVVQKIACGDHHVLTIS 228
L PV ++ G F+A VTD+G L TFG + + LGRG ED +P+ F E+ V KI+CGD+H+L ++
Sbjct: 400 LQGIPVKAVSCGEEFTACVTDEGKLYTFGSDYYGCLGRGEDYEPEDXXXXXXXEVKNPIMVSFFDERPVDKISCGDNHILALT 482
BLAST of mRNA_M-pyrifera_M_contig68814.16544.1 vs. uniprot
Match: A0A7M7PSL2_STRPU (Protein kinase domain-containing protein n=2 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7PSL2_STRPU) HSP 1 Score: 54.3 bits (129), Expect = 1.020e-6 Identity = 29/83 (34.94%), Postives = 44/83 (53.01%), Query Frame = 1
Query: 13 LSNAPVTQIAAGPLFSAIVTDQGHLITFGWNDFAVLGRGNVLASEDA---------SPL--PEFAEKVVQKIACGDHHVLTIS 228
L P+ + G F+A +TD+G + TFG + + LGRG ED SP+ F E+ V KI+CGD+H+L ++
Sbjct: 399 LQGIPIKAVGCGEEFTACITDEGQVYTFGSDYYGCLGRGEDYEPEDXXXXXXXXVKSPILVSFFNERPVNKISCGDNHILALT 481
BLAST of mRNA_M-pyrifera_M_contig68814.16544.1 vs. uniprot
Match: A0A5N6NPU5_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NPU5_9ASTR) HSP 1 Score: 52.8 bits (125), Expect = 3.430e-6 Identity = 25/69 (36.23%), Postives = 38/69 (55.07%), Query Frame = 1
Query: 25 PVTQIAAGPLFSAIVTDQGHLITFGWNDFAVLGRGNVLASEDASPLPEFAEKVVQKIACGDHHVLTISD 231
PV +A G F+ ++T+ GHL ++G N LGRGN + P+P V +IA G +H L ++D
Sbjct: 248 PVVSVACGGFFTTVITNDGHLWSWGANSNNELGRGNRVGGWKPQPIPGLEGVSVIQIASGGYHSLALTD 316
BLAST of mRNA_M-pyrifera_M_contig68814.16544.1 vs. uniprot
Match: A0A498IG32_MALDO (Uncharacterized protein n=14 Tax=Maleae TaxID=721813 RepID=A0A498IG32_MALDO) HSP 1 Score: 52.0 bits (123), Expect = 6.470e-6 Identity = 26/67 (38.81%), Postives = 37/67 (55.22%), Query Frame = 1
Query: 28 VTQIAAGPLFSAIVTDQGHLITFGWNDFAVLGRGNVLASEDASPLPEFAEKVVQKIACGDHHVLTIS 228
V +IA G SA++TD G L+TFGW + G+GN + S + +E V+ IA G H L +S
Sbjct: 305 VKEIACGGRHSAVITDAGALLTFGWGLYGQCGQGNTIDQLRPSYVKSLSETKVKNIAAGLWHTLCVS 371
BLAST of mRNA_M-pyrifera_M_contig68814.16544.1 vs. uniprot
Match: A7SKU3_NEMVE (Predicted protein (Fragment) n=4 Tax=Nematostella vectensis TaxID=45351 RepID=A7SKU3_NEMVE) HSP 1 Score: 52.0 bits (123), Expect = 6.550e-6 Identity = 28/73 (38.36%), Postives = 41/73 (56.16%), Query Frame = 1
Query: 13 LSNAPVTQIAAGPLFSAIVTDQGHLITFGWNDFAVLGRGNVLASEDASP--LPEFAEKVVQKIACGDHHVLTI 225
L P+ ++A G F+A +TD G L TFG + F +G N L E P + F +K V+ I+CGD HV+ +
Sbjct: 384 LFGIPIKKVACGDEFTACITDDGALYTFGSDYFGCIGCSNELDEEVLLPHKVTFFNDKPVEDISCGDCHVVVM 456
BLAST of mRNA_M-pyrifera_M_contig68814.16544.1 vs. uniprot
Match: UPI0009E3FA21 (serine/threonine-protein kinase Nek9-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E3FA21) HSP 1 Score: 52.0 bits (123), Expect = 6.660e-6 Identity = 26/69 (37.68%), Postives = 43/69 (62.32%), Query Frame = 1
Query: 28 VTQIAAGPLFSAIVTDQGHLITFGWNDFAVLGRGNVLASEDASP--LPEFAEKVVQKIACGDHHVLTIS 228
+ Q+A G F+A VT++G L TFG + + +G N L E A+P + FAE V ++ACG+ H++ ++
Sbjct: 390 IKQVACGDEFTACVTEEGVLYTFGSDYWGCIGCNNELDEEVATPYRVEFFAENPVSQVACGECHIVALT 458
BLAST of mRNA_M-pyrifera_M_contig68814.16544.1 vs. uniprot
Match: UPI00077A13DE (serine/threonine-protein kinase Nek9-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A13DE) HSP 1 Score: 50.8 bits (120), Expect = 9.510e-6 Identity = 26/74 (35.14%), Postives = 42/74 (56.76%), Query Frame = 1
Query: 13 LSNAPVTQIAAGPLFSAIVTDQGHLITFGWNDFAVLGRGNVLASEDASP--LPEFAEKVVQKIACGDHHVLTIS 228
L P+ Q+A G F+A +T+ G L TFG + + +G N L + P + FAE V ++ACG+ H++ I+
Sbjct: 89 LHGIPIKQVACGDEFTACITEDGVLYTFGSDYWGCIGCNNELDEDVTLPFRVDFFAENPVAEVACGECHIVVIT 162
BLAST of mRNA_M-pyrifera_M_contig68814.16544.1 vs. uniprot
Match: L8GN81_ACACA (Regulator of chromosome condensation (RCC1) repeat domain containing protein (Fragment) n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GN81_ACACA) HSP 1 Score: 51.2 bits (121), Expect = 1.110e-5 Identity = 29/78 (37.18%), Postives = 42/78 (53.85%), Query Frame = 1
Query: 1 MQGPLSNAPVTQIAAGPLFSAIVTDQGHLITFGWNDFAVLGRGNVLASEDASPLPEFAEKV--VQKIACGDHHVLTIS 228
M G S+ VT IAAG SA+VT +GHL+T G F LG G++ + + AE V ++ACG H + ++
Sbjct: 88 MAGLHSSIVVTCIAAGMRHSALVTQEGHLLTLGHGKFGELGHGDLATRSTPTLVAHLAESRLRVAQVACGQKHTVCLT 165
BLAST of mRNA_M-pyrifera_M_contig68814.16544.1 vs. uniprot
Match: A0A5N5H2F8_9ROSA (Ultraviolet-B receptor UVR8-like n=11 Tax=Maleae TaxID=721813 RepID=A0A5N5H2F8_9ROSA) HSP 1 Score: 51.2 bits (121), Expect = 1.190e-5 Identity = 29/68 (42.65%), Postives = 36/68 (52.94%), Query Frame = 1
Query: 28 VTQIAAGPLFSAIVTDQGHLITFGWNDFAVLGRGNVLASEDASPLPEFAEKVVQKIACGDHHVLTISD 231
V +IA G SA+VTD G L+TFGW + G+GN S L + V+ IA G H L ISD
Sbjct: 227 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGQGNTNDQLRPSYLNSLSGTKVKNIAAGLWHTLCISD 294
BLAST of mRNA_M-pyrifera_M_contig68814.16544.1 vs. uniprot
Match: A0A6P4D7I3_ARADU (ultraviolet-B receptor UVR8 isoform X1 n=9 Tax=Arachis TaxID=3817 RepID=A0A6P4D7I3_ARADU) HSP 1 Score: 51.2 bits (121), Expect = 1.210e-5 Identity = 26/67 (38.81%), Postives = 36/67 (53.73%), Query Frame = 1
Query: 28 VTQIAAGPLFSAIVTDQGHLITFGWNDFAVLGRGNVLASEDASPLPEFAEKVVQKIACGDHHVLTIS 228
V +IA G SA+VTD G L+TFGW + G+GN + +P V+KIA G H L ++
Sbjct: 314 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGQGNNADQLRPTLVPSLLSTTVEKIAAGLWHTLCVT 380 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68814.16544.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig68814.16544.1 >prot_M-pyrifera_M_contig68814.16544.1 ID=prot_M-pyrifera_M_contig68814.16544.1|Name=mRNA_M-pyrifera_M_contig68814.16544.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=77bp MQGPLSNAPVTQIAAGPLFSAIVTDQGHLITFGWNDFAVLGRGNVLASEDback to top mRNA from alignment at M-pyrifera_M_contig68814:843..1073- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig68814.16544.1 ID=mRNA_M-pyrifera_M_contig68814.16544.1|Name=mRNA_M-pyrifera_M_contig68814.16544.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=231bp|location=Sequence derived from alignment at M-pyrifera_M_contig68814:843..1073- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig68814:843..1073- >mRNA_M-pyrifera_M_contig68814.16544.1 ID=mRNA_M-pyrifera_M_contig68814.16544.1|Name=mRNA_M-pyrifera_M_contig68814.16544.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=462bp|location=Sequence derived from alignment at M-pyrifera_M_contig68814:843..1073- (Macrocystis pyrifera P11B4 male)back to top |