mRNA_M-pyrifera_M_contig68497.16480.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig68497.16480.1 vs. uniprot
Match: A0A812XWB5_9DINO (HelA protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812XWB5_9DINO) HSP 1 Score: 258 bits (660), Expect = 1.130e-76 Identity = 146/166 (87.95%), Postives = 150/166 (90.36%), Query Frame = 1
Query: 1 KTDMNNLTKLLLVSTITGLLFLGGCGTESEAPDTDSHLDHDNHEGHNHGEDXXXXXXXXXXXPDAHGSEGELGSVTIAGTTLSVNMGGDLKPGAVMHLDIKATDGPEPVAIRVWIGDKAATGALKGKATGSGGDYHAEAEAPAELMPDAAVWIEIETAIGSRETGS 498
KTDMNNLTKLLL STI G LFLGGCG ESEAP TDSHLDHDNHEGHNHGE XXXXXXXXXXX GSE ELG VTIAGTTLSVNMGGDLKPGAVMHLDIK TDGPEP+AIRVWIGD+AATGALK KATG+GGDYHAEAEAPAELMPDAAVWIEIETA SRETG+
Sbjct: 4547 KTDMNNLTKLLLASTIIGPLFLGGCGNESEAPGTDSHLDHDNHEGHNHGEXXXXXXXXXXXXXXXXGSEDELGFVTIAGTTLSVNMGGDLKPGAVMHLDIKTTDGPEPIAIRVWIGDRAATGALKRKATGNGGDYHAEAEAPAELMPDAAVWIEIETADDSRETGT 4712
BLAST of mRNA_M-pyrifera_M_contig68497.16480.1 vs. uniprot
Match: A0A3D4UIM1_9BACT (Uncharacterized protein n=2 Tax=Phycisphaerae TaxID=666505 RepID=A0A3D4UIM1_9BACT) HSP 1 Score: 219 bits (559), Expect = 1.280e-70 Identity = 125/167 (74.85%), Postives = 140/167 (83.83%), Query Frame = 1
Query: 10 MNNLTKLLLVSTITGLLFLGGCGTESEAPDTDSHLDHDNHEGHNHGEDXXXXXXXXXXXPDAHGSEGELGSVTIAGTTLSVNMGGDLKPGAVMHLDIKATDGPEPVAIRVWIGDKAATGALKGKATGSGGDYHAEAEAPAELMPDAAVWIEIETAIGSRETGSISID 510
MNNLTKLLL STITG+LFLGGC ESEAPDTDSHLDHDNHEGH+HG+DXXXXXXXXXXX GSE +LGSVTIAGTTLSV MG D++PGAVMHLDI+ T GPEPVAIRVWIGD+AATG LK KA + DYHAE E P+EL P ++WIEIETA G R +G+I I+
Sbjct: 1 MNNLTKLLLASTITGMLFLGGCSNESEAPDTDSHLDHDNHEGHDHGDDXXXXXXXXXXXXXXXGSEYDLGSVTIAGTTLSVKMGEDIEPGAVMHLDIETTAGPEPVAIRVWIGDQAATGTLKSKAMWNSVDYHAEVEVPSELRPGLSLWIEIETADGERASGAIPIN 167
BLAST of mRNA_M-pyrifera_M_contig68497.16480.1 vs. uniprot
Match: A0A2E2N5L6_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E2N5L6_9BACT) HSP 1 Score: 163 bits (412), Expect = 3.650e-48 Identity = 100/177 (56.50%), Postives = 125/177 (70.62%), Query Frame = 1
Query: 10 MNNLTKLLLVSTITGLLFLGGCGTESEAPDTDSHLDHDNHEGHNHGEDXXXXXXXXXXXPDAH----------GSEGELGSVTIAGTTLSVNMGGDLKPGAVMHLDIKATDGPEPVAIRVWIGDKAATGALKGKATGSGGDYHAEAEAPAELMPDAAVWIEIETAIGSRETGSISID 510
M +LTKL LVS L L GCG ES + + +H +H+GH+H + XXXXXXXXXX G+E +LGSVTIAGTT V+MGG+++P A +HLDI+ TDGPEP AIRVWIGD+A TGALK KA GS GDYHA+AEAPA + ++WIEIETA G+RE+GSI+I+
Sbjct: 1 MTDLTKLFLVSLAAASLTLSGCGNESGSSNAAGQSEHSDHDGHDHDAEGXXXXXXXXXXXXXXXXXXXXXXXXGAERDLGSVTIAGTTYRVSMGGEIEPSATVHLDIERTDGPEPAAIRVWIGDEAGTGALKSKAMGSSGDYHADAEAPANVSLPTSLWIEIETANGTRESGSININ 177
BLAST of mRNA_M-pyrifera_M_contig68497.16480.1 vs. uniprot
Match: A0A7Z9PTJ5_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PTJ5_9BACT) HSP 1 Score: 127 bits (318), Expect = 5.670e-35 Identity = 61/96 (63.54%), Postives = 76/96 (79.17%), Query Frame = 1
Query: 223 VTIAGTTLSVNMGGDLKPGAVMHLDIKATDGPEPVAIRVWIGDKAATGALKGKATGSGGDYHAEAEAPAELMPDAAVWIEIETAIGSRETGSISID 510
+TIA TLSVNM GDLKPGAV+HLDI+ T GP+PVA+RVWIGD+AATG LK KA + DYHAE E P+EL PD ++W+EI+ A G R +G+I I+
Sbjct: 1 MTIADATLSVNMSGDLKPGAVLHLDIETTAGPDPVAVRVWIGDQAATGTLKSKAMWNSMDYHAEVEVPSELRPDYSIWLEIKAADGERASGAIPIN 96
BLAST of mRNA_M-pyrifera_M_contig68497.16480.1 vs. uniprot
Match: A0A7X0H4E0_9BACT (Uncharacterized protein n=1 Tax=Algisphaera agarilytica TaxID=1385975 RepID=A0A7X0H4E0_9BACT) HSP 1 Score: 114 bits (286), Expect = 2.260e-29 Identity = 70/168 (41.67%), Postives = 93/168 (55.36%), Query Frame = 1
Query: 10 MNNLTKLLLVSTITGLLFLGGCGTESEAPDTDSHLDHDNH-EGHNHGEDXXXXXXXXXXXPDAHGSEGELGSVTIAGTTLSVNMGGDLKPGAVMHLDIKATDGPEPVAIRVWIGDKAATGALKGKATGSGGDYHAEAEAPAELMPDAAVWIEIETAIGSRETGSISID 510
M L KLLL +TG L GCG +SH DHD E H+ +D D H ++ LG + IAG L V++GG+ P +HLDI+ P P AIR WIGD++ATG++K KA GSGGDYHA+ PA+ +WIE E + G R TG +S++
Sbjct: 1 MTILMKLLLAPALTGTFLLTGCG--------ESHDDHDXXXEQHSEVDDHANEVK------DEHDADHGLGQIEIAGLVLEVSVGGEPGPNVTLHLDIEVKGEPTPEAIRAWIGDESATGSVKSKAFGSGGDYHADVTCPADFDEGGILWIECENSEGVRITGQLSLE 154
BLAST of mRNA_M-pyrifera_M_contig68497.16480.1 vs. uniprot
Match: A0A518CVU9_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518CVU9_9BACT) HSP 1 Score: 113 bits (283), Expect = 7.770e-29 Identity = 54/103 (52.43%), Postives = 74/103 (71.84%), Query Frame = 1
Query: 196 HGSEGELGSVTIAGTTLSVNMGGDLKPGAVMHLDIKATDGPEPVAIRVWIGDKAATGALKGKATGSGGDYHAEAEAPAELMPDAAVWIEIETAIGSRETGSIS 504
H +E LG V++ +T SV +GGD++PGA +H+DI T G EP AIRVWIGD + +G+LKGKA SG +H +AE P+ + P +A+WIE+E GSR TGSI+
Sbjct: 61 HTAERSLGVVSVGASTFSVAIGGDIEPGASVHVDIDHTAGAEPAAIRVWIGDASGSGSLKGKAVASGDTFHGDAEVPSPMAPGSALWIEVEARDGSRATGSIA 163
BLAST of mRNA_M-pyrifera_M_contig68497.16480.1 vs. uniprot
Match: A0A2E2N5U2_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E2N5U2_9BACT) HSP 1 Score: 90.1 bits (222), Expect = 1.430e-19 Identity = 70/178 (39.33%), Postives = 94/178 (52.81%), Query Frame = 1
Query: 1 KTDMNNLTKLLLVSTITGLLFLGGCGTESEAPDTDSHLDHDNHEGHNHGEDXXXXXXXXXXXP-------DAHGSEG--ELGSVTIAGTTLSVNMGGDLKPGAVMHLDIKATDGPEPVAIRVWIGDKAATGALKGKATGSGGDYHAEAEAPAELMPDAAVWIEIETAIGSRETGSISI 507
KT +++ L + + ++ L L GCG D H DHD H H XXXXXXX D HG E E+G+V I G+TL V +GG L G +D+ G P A+R+WIGD+AATG +K KA G GG +HA E P+ + A +W+E+E A G R S+ I
Sbjct: 2 KTFSHSVVVLGIAAAVSVGLVLSGCGEAGSTTGAD-HGDHD----HAHXXXXXXXXXXDGGQEHVSGGGVDTHGHEETREVGTVEIGGSTLRVAVGGALIAGGEAQVDVTVGGGETPTALRLWIGDRAATGTIKTKADGGGGGFHAHVEVPSNVDGMAVLWVEVEQADGERLAESLPI 174
BLAST of mRNA_M-pyrifera_M_contig68497.16480.1 vs. uniprot
Match: A0A7Z9IHK4_9BACT (Uncharacterized protein n=3 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9IHK4_9BACT) HSP 1 Score: 77.8 bits (190), Expect = 5.240e-15 Identity = 37/94 (39.36%), Postives = 59/94 (62.77%), Query Frame = 1
Query: 220 SVTIAGTTLSVNMGGDLKPGAVMHLDIKATDGPEPVAIRVWIGDKAATGALKGKATGSGGDYHAEAEAPAELMPDAAVWIEIETAIGSRETGSI 501
++T+AG TL V + G + P A++ + I T G AIR+W+GD++ G++K K G HA +APA+L +AVW+E++T G +E+G I
Sbjct: 64 TITLAGITLEVTVQGTIAPTAMLDVSILQTAGGHASAIRLWVGDESGVGSIKTKTHSHGAASHAHVQAPAKLPVGSAVWVEVQTPSGEKESGKI 157
BLAST of mRNA_M-pyrifera_M_contig68497.16480.1 vs. uniprot
Match: A0A2E5UEP1_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E5UEP1_9BACT) HSP 1 Score: 75.1 bits (183), Expect = 9.070e-14 Identity = 34/95 (35.79%), Postives = 55/95 (57.89%), Query Frame = 1
Query: 223 VTIAGTTLSVNMGGDLKPGAVMHLDIKATDGPEPVAIRVWIGDKAATGALKGKATGSGGDYHAEAEAPAELMPDAAVWIEIETAIGSRETGSISI 507
+T+A L + GD PG+ + + +++ G P IRVW+G ++ G+ K K G YHA A P+ L +A+WIE++T G +E+GSI +
Sbjct: 85 LTLANVALEIRFRGDGTPGSELDVSLRSVGGDRPATIRVWVGVESGKGSRKTKVHSHGATYHAHAHVPSNLPEGSALWIEVQTVNGEKESGSIDL 179 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68497.16480.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig68497.16480.1 >prot_M-pyrifera_M_contig68497.16480.1 ID=prot_M-pyrifera_M_contig68497.16480.1|Name=mRNA_M-pyrifera_M_contig68497.16480.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=168bp MNNLTKLLLVSTITGLLFLGGCGTESEAPDTDSHLDHDNHEGHNHGEDGHback to top mRNA from alignment at M-pyrifera_M_contig68497:98..610+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig68497.16480.1 ID=mRNA_M-pyrifera_M_contig68497.16480.1|Name=mRNA_M-pyrifera_M_contig68497.16480.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=513bp|location=Sequence derived from alignment at M-pyrifera_M_contig68497:98..610+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig68497:98..610+ >mRNA_M-pyrifera_M_contig68497.16480.1 ID=mRNA_M-pyrifera_M_contig68497.16480.1|Name=mRNA_M-pyrifera_M_contig68497.16480.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1008bp|location=Sequence derived from alignment at M-pyrifera_M_contig68497:98..610+ (Macrocystis pyrifera P11B4 male)back to top |