mRNA_M-pyrifera_M_contig6756.16308.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig6756.16308.1 vs. uniprot
Match: D8LJN5_ECTSI (Ubiquitin conjugating enzyme n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJN5_ECTSI) HSP 1 Score: 268 bits (685), Expect = 1.440e-90 Identity = 130/145 (89.66%), Postives = 131/145 (90.34%), Query Frame = 1
Query: 1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTILGPNGTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLQVLAQWNRNYGIEQASQGWTRRIGVLVALRNEMAGPSNRRLPQPPEGTEF 435
VPRNFKLLEELEKGEKGVGDHSVSFGLVDG+DIFMTDWNGTILGPNGTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKL VLAQWNRNYGIEQ VLVALRNEMA PSNRRL QP EGTEF
Sbjct: 12 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNGTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQ----------VLVALRNEMASPSNRRLQQPSEGTEF 146
BLAST of mRNA_M-pyrifera_M_contig6756.16308.1 vs. uniprot
Match: A0A835Z3M3_9STRA (Ubiquitin conjugating enzyme n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3M3_9STRA) HSP 1 Score: 198 bits (504), Expect = 5.490e-63 Identity = 93/145 (64.14%), Postives = 111/145 (76.55%), Query Frame = 1
Query: 1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTILGPNGTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLQVLAQWNRNYGIEQASQGWTRRIGVLVALRNEMAGPSNRRLPQPPEGTEF 435
+PRNFKLLEELEK EKG GD + SFGLV+ +DIFMTDWNG+ILGP GT HE RLY +R+HCGE YPD P VRF+ ++N+ CVDQR+GEV + +L VL+ WNRNYGIEQ VL+ LR+EMA +NRRLPQPPEG F
Sbjct: 12 IPRNFKLLEELEKSEKGHGDMNTSFGLVNQDDIFMTDWNGSILGPPGTIHETRLYEVRLHCGESYPDVAPEVRFLHRINLSCVDQRTGEVIKARLPVLSSWNRNYGIEQ----------VLMGLRHEMASSANRRLPQPPEGARF 146
BLAST of mRNA_M-pyrifera_M_contig6756.16308.1 vs. uniprot
Match: K3WUW2_GLOUD (UBC core domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WUW2_GLOUD) HSP 1 Score: 185 bits (469), Expect = 1.130e-57 Identity = 87/145 (60.00%), Postives = 107/145 (73.79%), Query Frame = 1
Query: 1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTILGPNGTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLQVLAQWNRNYGIEQASQGWTRRIGVLVALRNEMAGPSNRRLPQPPEGTEF 435
VPRNFKLLEELE EKG GD S+S+GL +DIF+T+W GTILGP GT H+GR+Y+LRIHCG++YP+ P V F S++NM CVD +SG V +L L WNR++GIE VLVA+RNEMA P+NRRLPQPPEG+ F
Sbjct: 11 VPRNFKLLEELESAEKGHGDMSISYGLEQADDIFLTNWIGTILGPAGTCHDGRIYSLRIHCGDQYPNIPPEVAFTSRINMSCVDAQSGRVDPRRLPALVNWNRSHGIEN----------VLVAIRNEMASPTNRRLPQPPEGSSF 145
BLAST of mRNA_M-pyrifera_M_contig6756.16308.1 vs. uniprot
Match: A0A067D9H4_SAPPC (UBC core domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D9H4_SAPPC) HSP 1 Score: 183 bits (465), Expect = 4.740e-57 Identity = 87/145 (60.00%), Postives = 107/145 (73.79%), Query Frame = 1
Query: 1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTILGPNGTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLQVLAQWNRNYGIEQASQGWTRRIGVLVALRNEMAGPSNRRLPQPPEGTEF 435
+PRNFKLLEELE EKG GD S+S+GL +DIF+T W GTILGP GT H+GR+Y+L+IHCGE YP++ P V F S++NM CVDQ +G V ++ VLA WNRN GIEQ VLV+LRNEMA P+N+RLPQ PEG+ F
Sbjct: 12 IPRNFKLLEELESAEKGHGDMSISYGLEQADDIFLTSWIGTILGPAGTCHDGRIYSLKIHCGEHYPNQPPDVYFTSRINMSCVDQSNGRVDPRRIGVLASWNRNSGIEQ----------VLVSLRNEMASPANKRLPQHPEGSAF 146
BLAST of mRNA_M-pyrifera_M_contig6756.16308.1 vs. uniprot
Match: UPI00044167F1 (UBC-like protein n=1 Tax=Punctularia strigosozonata (strain HHB-11173) TaxID=741275 RepID=UPI00044167F1) HSP 1 Score: 181 bits (458), Expect = 4.400e-56 Identity = 87/146 (59.59%), Postives = 110/146 (75.34%), Query Frame = 1
Query: 1 VPRNFKLLEELEKGEKGVGDHSVSFGLVD-GEDIFMTDWNGTILGPNGTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLQVLAQWNRNYGIEQASQGWTRRIGVLVALRNEMAGPSNRRLPQPPEGTEF 435
VPRNF+LLEELEKGEKG+GD S S+GL D G+D+ M+DWNGTI+GP T HE R+Y+L+I+CG EYPDR P ++F+S++N+ V+Q G+V +KL VLA WNRN IE VLV +R EMAGPSNR+LPQPPEG+ F
Sbjct: 4 VPRNFRLLEELEKGEKGIGDGSCSYGLEDNGDDMTMSDWNGTIIGPGHTVHENRIYSLKIYCGPEYPDRPPTIQFLSRVNLPFVNQTDGKVDPSKLPVLAHWNRNNSIET----------VLVEIRREMAGPSNRKLPQPPEGSTF 139
BLAST of mRNA_M-pyrifera_M_contig6756.16308.1 vs. uniprot
Match: A0A024U9Q8_9STRA (UBC core domain-containing protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024U9Q8_9STRA) HSP 1 Score: 181 bits (458), Expect = 5.330e-56 Identity = 88/145 (60.69%), Postives = 103/145 (71.03%), Query Frame = 1
Query: 1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTILGPNGTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLQVLAQWNRNYGIEQASQGWTRRIGVLVALRNEMAGPSNRRLPQPPEGTEF 435
VPRNFKLLEELE EKG GD S+S+GL +DIF+T W GTILGP GT H+GR+Y+L+IHCGE YP+ P V F S++NM CVDQ +G V L VLA W R YGIEQ VLVALRNEMA +N+RLPQ PEG+ F
Sbjct: 11 VPRNFKLLEELESAEKGHGDMSISYGLEQADDIFLTSWIGTILGPAGTTHDGRIYSLKIHCGENYPNAPPEVLFTSRINMSCVDQTNGRVNPRGLGVLASWQRTYGIEQ----------VLVALRNEMASATNKRLPQHPEGSSF 145
BLAST of mRNA_M-pyrifera_M_contig6756.16308.1 vs. uniprot
Match: A0A2D4BCZ8_PYTIN (DNA topoisomerase 2 DNA gyrase B n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BCZ8_PYTIN) HSP 1 Score: 181 bits (458), Expect = 5.690e-56 Identity = 87/145 (60.00%), Postives = 104/145 (71.72%), Query Frame = 1
Query: 1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTILGPNGTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLQVLAQWNRNYGIEQASQGWTRRIGVLVALRNEMAGPSNRRLPQPPEGTEF 435
VPRNFKLLEELE EKG GD S+SFGL +DIF+T+W GTILGP GT H+GR+Y+LRIHC ++YP P F S++NM CVD ++G V +L VLA WNRN GIE VL+ALR EMA P+NRRLPQPPEG+ F
Sbjct: 13 VPRNFKLLEELESAEKGHGDMSISFGLEQADDIFLTNWIGTILGPAGTCHDGRIYSLRIHCSDQYPTMPPEFYFTSRINMSCVDPQNGRVDARRLPVLANWNRNSGIET----------VLIALRAEMASPTNRRLPQPPEGSTF 147
BLAST of mRNA_M-pyrifera_M_contig6756.16308.1 vs. uniprot
Match: A0A5B1QIS4_9AGAM (UBC-like protein n=1 Tax=Dentipellis sp. KUC8613 TaxID=1883078 RepID=A0A5B1QIS4_9AGAM) HSP 1 Score: 180 bits (457), Expect = 6.050e-56 Identity = 86/145 (59.31%), Postives = 107/145 (73.79%), Query Frame = 1
Query: 1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTILGPNGTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLQVLAQWNRNYGIEQASQGWTRRIGVLVALRNEMAGPSNRRLPQPPEGTEF 435
VPRNF+LLEELEKGEKG+GD S S+GL DG+DI M+DWNGTI+GP T HE R+Y+L+I CGE YPD+ P+V+F+S++N+ V Q G+V R+KL VLA WNRN IE VLV +R EMA NR+LPQPPEG+ F
Sbjct: 4 VPRNFRLLEELEKGEKGIGDGSCSYGLEDGDDILMSDWNGTIIGPGHTVHENRIYSLKIVCGESYPDQPPIVQFISRVNLPFVSQTDGKVDRSKLPVLANWNRNSSIET----------VLVEIRREMASFHNRKLPQPPEGSTF 138
BLAST of mRNA_M-pyrifera_M_contig6756.16308.1 vs. uniprot
Match: W2RIE0_9EURO (UBC core domain-containing protein n=2 Tax=Chaetothyriales TaxID=34395 RepID=W2RIE0_9EURO) HSP 1 Score: 180 bits (456), Expect = 8.870e-56 Identity = 83/145 (57.24%), Postives = 107/145 (73.79%), Query Frame = 1
Query: 1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTILGPNGTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLQVLAQWNRNYGIEQASQGWTRRIGVLVALRNEMAGPSNRRLPQPPEGTEF 435
VPRNF+LLEELEKGEKG+G + S+GL DG+D+ MT+WNGTILGP + HE R+Y++ IHCG++YPD+ PV++FVSK+N+ CVDQR+G+V KL LA W R Y +E VL+ LR MA P N++LPQPPEGT F
Sbjct: 5 VPRNFRLLEELEKGEKGLGAEACSYGLADGDDLMMTNWNGTILGPPHSAHENRIYSVNIHCGDDYPDKPPVLQFVSKINVPCVDQRTGKVDPTKLPCLASWRREYTMET----------VLIELRRYMALPQNKKLPQPPEGTTF 139
BLAST of mRNA_M-pyrifera_M_contig6756.16308.1 vs. uniprot
Match: S7QBC6_GLOTA (UBC-like protein n=2 Tax=Gloeophyllales TaxID=452339 RepID=S7QBC6_GLOTA) HSP 1 Score: 179 bits (455), Expect = 1.220e-55 Identity = 83/145 (57.24%), Postives = 108/145 (74.48%), Query Frame = 1
Query: 1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTILGPNGTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLQVLAQWNRNYGIEQASQGWTRRIGVLVALRNEMAGPSNRRLPQPPEGTEF 435
+PRNF+LLEELEKGEKG+GD S S+GL DG+D+ M+ WNGTI+GP T HE R+Y+L+IHCG++YP+R P V+F+SK+N+ V Q G+V +KL VLA WNRN+ IE VLV +R EMA +NR+LPQPPEG+ F
Sbjct: 4 IPRNFRLLEELEKGEKGIGDGSCSYGLEDGDDMLMSSWNGTIIGPGHTVHENRIYSLKIHCGDDYPERPPTVQFISKVNLPFVSQTDGKVDPSKLPVLAHWNRNHSIET----------VLVEIRKEMASFNNRKLPQPPEGSVF 138 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6756.16308.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig6756.16308.1 >prot_M-pyrifera_M_contig6756.16308.1 ID=prot_M-pyrifera_M_contig6756.16308.1|Name=mRNA_M-pyrifera_M_contig6756.16308.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=146bp VPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTILGPNGTQHback to top mRNA from alignment at M-pyrifera_M_contig6756:2310..4891+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig6756.16308.1 ID=mRNA_M-pyrifera_M_contig6756.16308.1|Name=mRNA_M-pyrifera_M_contig6756.16308.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2582bp|location=Sequence derived from alignment at M-pyrifera_M_contig6756:2310..4891+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig6756:2310..4891+ >mRNA_M-pyrifera_M_contig6756.16308.1 ID=mRNA_M-pyrifera_M_contig6756.16308.1|Name=mRNA_M-pyrifera_M_contig6756.16308.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=876bp|location=Sequence derived from alignment at M-pyrifera_M_contig6756:2310..4891+ (Macrocystis pyrifera P11B4 male)back to top |