mRNA_M-pyrifera_M_contig6756.16308.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig6756.16308.1
Unique NamemRNA_M-pyrifera_M_contig6756.16308.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig6756.16308.1 vs. uniprot
Match: D8LJN5_ECTSI (Ubiquitin conjugating enzyme n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJN5_ECTSI)

HSP 1 Score: 268 bits (685), Expect = 1.440e-90
Identity = 130/145 (89.66%), Postives = 131/145 (90.34%), Query Frame = 1
Query:    1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTILGPNGTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLQVLAQWNRNYGIEQASQGWTRRIGVLVALRNEMAGPSNRRLPQPPEGTEF 435
            VPRNFKLLEELEKGEKGVGDHSVSFGLVDG+DIFMTDWNGTILGPNGTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKL VLAQWNRNYGIEQ          VLVALRNEMA PSNRRL QP EGTEF
Sbjct:   12 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGDDIFMTDWNGTILGPNGTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLPVLAQWNRNYGIEQ----------VLVALRNEMASPSNRRLQQPSEGTEF 146          
BLAST of mRNA_M-pyrifera_M_contig6756.16308.1 vs. uniprot
Match: A0A835Z3M3_9STRA (Ubiquitin conjugating enzyme n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3M3_9STRA)

HSP 1 Score: 198 bits (504), Expect = 5.490e-63
Identity = 93/145 (64.14%), Postives = 111/145 (76.55%), Query Frame = 1
Query:    1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTILGPNGTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLQVLAQWNRNYGIEQASQGWTRRIGVLVALRNEMAGPSNRRLPQPPEGTEF 435
            +PRNFKLLEELEK EKG GD + SFGLV+ +DIFMTDWNG+ILGP GT HE RLY +R+HCGE YPD  P VRF+ ++N+ CVDQR+GEV + +L VL+ WNRNYGIEQ          VL+ LR+EMA  +NRRLPQPPEG  F
Sbjct:   12 IPRNFKLLEELEKSEKGHGDMNTSFGLVNQDDIFMTDWNGSILGPPGTIHETRLYEVRLHCGESYPDVAPEVRFLHRINLSCVDQRTGEVIKARLPVLSSWNRNYGIEQ----------VLMGLRHEMASSANRRLPQPPEGARF 146          
BLAST of mRNA_M-pyrifera_M_contig6756.16308.1 vs. uniprot
Match: K3WUW2_GLOUD (UBC core domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WUW2_GLOUD)

HSP 1 Score: 185 bits (469), Expect = 1.130e-57
Identity = 87/145 (60.00%), Postives = 107/145 (73.79%), Query Frame = 1
Query:    1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTILGPNGTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLQVLAQWNRNYGIEQASQGWTRRIGVLVALRNEMAGPSNRRLPQPPEGTEF 435
            VPRNFKLLEELE  EKG GD S+S+GL   +DIF+T+W GTILGP GT H+GR+Y+LRIHCG++YP+  P V F S++NM CVD +SG V   +L  L  WNR++GIE           VLVA+RNEMA P+NRRLPQPPEG+ F
Sbjct:   11 VPRNFKLLEELESAEKGHGDMSISYGLEQADDIFLTNWIGTILGPAGTCHDGRIYSLRIHCGDQYPNIPPEVAFTSRINMSCVDAQSGRVDPRRLPALVNWNRSHGIEN----------VLVAIRNEMASPTNRRLPQPPEGSSF 145          
BLAST of mRNA_M-pyrifera_M_contig6756.16308.1 vs. uniprot
Match: A0A067D9H4_SAPPC (UBC core domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D9H4_SAPPC)

HSP 1 Score: 183 bits (465), Expect = 4.740e-57
Identity = 87/145 (60.00%), Postives = 107/145 (73.79%), Query Frame = 1
Query:    1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTILGPNGTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLQVLAQWNRNYGIEQASQGWTRRIGVLVALRNEMAGPSNRRLPQPPEGTEF 435
            +PRNFKLLEELE  EKG GD S+S+GL   +DIF+T W GTILGP GT H+GR+Y+L+IHCGE YP++ P V F S++NM CVDQ +G V   ++ VLA WNRN GIEQ          VLV+LRNEMA P+N+RLPQ PEG+ F
Sbjct:   12 IPRNFKLLEELESAEKGHGDMSISYGLEQADDIFLTSWIGTILGPAGTCHDGRIYSLKIHCGEHYPNQPPDVYFTSRINMSCVDQSNGRVDPRRIGVLASWNRNSGIEQ----------VLVSLRNEMASPANKRLPQHPEGSAF 146          
BLAST of mRNA_M-pyrifera_M_contig6756.16308.1 vs. uniprot
Match: UPI00044167F1 (UBC-like protein n=1 Tax=Punctularia strigosozonata (strain HHB-11173) TaxID=741275 RepID=UPI00044167F1)

HSP 1 Score: 181 bits (458), Expect = 4.400e-56
Identity = 87/146 (59.59%), Postives = 110/146 (75.34%), Query Frame = 1
Query:    1 VPRNFKLLEELEKGEKGVGDHSVSFGLVD-GEDIFMTDWNGTILGPNGTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLQVLAQWNRNYGIEQASQGWTRRIGVLVALRNEMAGPSNRRLPQPPEGTEF 435
            VPRNF+LLEELEKGEKG+GD S S+GL D G+D+ M+DWNGTI+GP  T HE R+Y+L+I+CG EYPDR P ++F+S++N+  V+Q  G+V  +KL VLA WNRN  IE           VLV +R EMAGPSNR+LPQPPEG+ F
Sbjct:    4 VPRNFRLLEELEKGEKGIGDGSCSYGLEDNGDDMTMSDWNGTIIGPGHTVHENRIYSLKIYCGPEYPDRPPTIQFLSRVNLPFVNQTDGKVDPSKLPVLAHWNRNNSIET----------VLVEIRREMAGPSNRKLPQPPEGSTF 139          
BLAST of mRNA_M-pyrifera_M_contig6756.16308.1 vs. uniprot
Match: A0A024U9Q8_9STRA (UBC core domain-containing protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024U9Q8_9STRA)

HSP 1 Score: 181 bits (458), Expect = 5.330e-56
Identity = 88/145 (60.69%), Postives = 103/145 (71.03%), Query Frame = 1
Query:    1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTILGPNGTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLQVLAQWNRNYGIEQASQGWTRRIGVLVALRNEMAGPSNRRLPQPPEGTEF 435
            VPRNFKLLEELE  EKG GD S+S+GL   +DIF+T W GTILGP GT H+GR+Y+L+IHCGE YP+  P V F S++NM CVDQ +G V    L VLA W R YGIEQ          VLVALRNEMA  +N+RLPQ PEG+ F
Sbjct:   11 VPRNFKLLEELESAEKGHGDMSISYGLEQADDIFLTSWIGTILGPAGTTHDGRIYSLKIHCGENYPNAPPEVLFTSRINMSCVDQTNGRVNPRGLGVLASWQRTYGIEQ----------VLVALRNEMASATNKRLPQHPEGSSF 145          
BLAST of mRNA_M-pyrifera_M_contig6756.16308.1 vs. uniprot
Match: A0A2D4BCZ8_PYTIN (DNA topoisomerase 2 DNA gyrase B n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BCZ8_PYTIN)

HSP 1 Score: 181 bits (458), Expect = 5.690e-56
Identity = 87/145 (60.00%), Postives = 104/145 (71.72%), Query Frame = 1
Query:    1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTILGPNGTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLQVLAQWNRNYGIEQASQGWTRRIGVLVALRNEMAGPSNRRLPQPPEGTEF 435
            VPRNFKLLEELE  EKG GD S+SFGL   +DIF+T+W GTILGP GT H+GR+Y+LRIHC ++YP   P   F S++NM CVD ++G V   +L VLA WNRN GIE           VL+ALR EMA P+NRRLPQPPEG+ F
Sbjct:   13 VPRNFKLLEELESAEKGHGDMSISFGLEQADDIFLTNWIGTILGPAGTCHDGRIYSLRIHCSDQYPTMPPEFYFTSRINMSCVDPQNGRVDARRLPVLANWNRNSGIET----------VLIALRAEMASPTNRRLPQPPEGSTF 147          
BLAST of mRNA_M-pyrifera_M_contig6756.16308.1 vs. uniprot
Match: A0A5B1QIS4_9AGAM (UBC-like protein n=1 Tax=Dentipellis sp. KUC8613 TaxID=1883078 RepID=A0A5B1QIS4_9AGAM)

HSP 1 Score: 180 bits (457), Expect = 6.050e-56
Identity = 86/145 (59.31%), Postives = 107/145 (73.79%), Query Frame = 1
Query:    1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTILGPNGTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLQVLAQWNRNYGIEQASQGWTRRIGVLVALRNEMAGPSNRRLPQPPEGTEF 435
            VPRNF+LLEELEKGEKG+GD S S+GL DG+DI M+DWNGTI+GP  T HE R+Y+L+I CGE YPD+ P+V+F+S++N+  V Q  G+V R+KL VLA WNRN  IE           VLV +R EMA   NR+LPQPPEG+ F
Sbjct:    4 VPRNFRLLEELEKGEKGIGDGSCSYGLEDGDDILMSDWNGTIIGPGHTVHENRIYSLKIVCGESYPDQPPIVQFISRVNLPFVSQTDGKVDRSKLPVLANWNRNSSIET----------VLVEIRREMASFHNRKLPQPPEGSTF 138          
BLAST of mRNA_M-pyrifera_M_contig6756.16308.1 vs. uniprot
Match: W2RIE0_9EURO (UBC core domain-containing protein n=2 Tax=Chaetothyriales TaxID=34395 RepID=W2RIE0_9EURO)

HSP 1 Score: 180 bits (456), Expect = 8.870e-56
Identity = 83/145 (57.24%), Postives = 107/145 (73.79%), Query Frame = 1
Query:    1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTILGPNGTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLQVLAQWNRNYGIEQASQGWTRRIGVLVALRNEMAGPSNRRLPQPPEGTEF 435
            VPRNF+LLEELEKGEKG+G  + S+GL DG+D+ MT+WNGTILGP  + HE R+Y++ IHCG++YPD+ PV++FVSK+N+ CVDQR+G+V   KL  LA W R Y +E           VL+ LR  MA P N++LPQPPEGT F
Sbjct:    5 VPRNFRLLEELEKGEKGLGAEACSYGLADGDDLMMTNWNGTILGPPHSAHENRIYSVNIHCGDDYPDKPPVLQFVSKINVPCVDQRTGKVDPTKLPCLASWRREYTMET----------VLIELRRYMALPQNKKLPQPPEGTTF 139          
BLAST of mRNA_M-pyrifera_M_contig6756.16308.1 vs. uniprot
Match: S7QBC6_GLOTA (UBC-like protein n=2 Tax=Gloeophyllales TaxID=452339 RepID=S7QBC6_GLOTA)

HSP 1 Score: 179 bits (455), Expect = 1.220e-55
Identity = 83/145 (57.24%), Postives = 108/145 (74.48%), Query Frame = 1
Query:    1 VPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTILGPNGTQHEGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLQVLAQWNRNYGIEQASQGWTRRIGVLVALRNEMAGPSNRRLPQPPEGTEF 435
            +PRNF+LLEELEKGEKG+GD S S+GL DG+D+ M+ WNGTI+GP  T HE R+Y+L+IHCG++YP+R P V+F+SK+N+  V Q  G+V  +KL VLA WNRN+ IE           VLV +R EMA  +NR+LPQPPEG+ F
Sbjct:    4 IPRNFRLLEELEKGEKGIGDGSCSYGLEDGDDMLMSSWNGTIIGPGHTVHENRIYSLKIHCGDDYPERPPTVQFISKVNLPFVSQTDGKVDPSKLPVLAHWNRNHSIET----------VLVEIRKEMASFNNRKLPQPPEGSVF 138          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6756.16308.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJN5_ECTSI1.440e-9089.66Ubiquitin conjugating enzyme n=2 Tax=Ectocarpus Ta... [more]
A0A835Z3M3_9STRA5.490e-6364.14Ubiquitin conjugating enzyme n=1 Tax=Tribonema min... [more]
K3WUW2_GLOUD1.130e-5760.00UBC core domain-containing protein n=2 Tax=Pythiac... [more]
A0A067D9H4_SAPPC4.740e-5760.00UBC core domain-containing protein n=4 Tax=Saprole... [more]
UPI00044167F14.400e-5659.59UBC-like protein n=1 Tax=Punctularia strigosozonat... [more]
A0A024U9Q8_9STRA5.330e-5660.69UBC core domain-containing protein n=4 Tax=Aphanom... [more]
A0A2D4BCZ8_PYTIN5.690e-5660.00DNA topoisomerase 2 DNA gyrase B n=1 Tax=Pythium i... [more]
A0A5B1QIS4_9AGAM6.050e-5659.31UBC-like protein n=1 Tax=Dentipellis sp. KUC8613 T... [more]
W2RIE0_9EURO8.870e-5657.24UBC core domain-containing protein n=2 Tax=Chaetot... [more]
S7QBC6_GLOTA1.220e-5557.24UBC-like protein n=2 Tax=Gloeophyllales TaxID=4523... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6756contigM-pyrifera_M_contig6756:2310..4891 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score269.2
Seed ortholog evalue1.1e-69
Seed eggNOG ortholog2880.D8LJN5
Preferred nameUBE2V2
KEGG koko:K03164,ko:K10704,ko:K20656
KEGG Pathwayko01524,ko04624,map01524,map04624
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0000165,GO:0000187,GO:0000209,GO:0000726,GO:0000729,GO:0001932,GO:0001934,GO:0002218,GO:0002221,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0002753,GO:0002757,GO:0002758,GO:0002764,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006301,GO:0006302,GO:0006303,GO:0006355,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0006974,GO:0007154,GO:0007165,GO:0007166,GO:0007254,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0008283,GO:0009605,GO:0009607,GO:0009617,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010557,GO:0010562,GO:0010604,GO:0010628,GO:0010646,GO:0010647,GO:0010720,GO:0010941,GO:0010975,GO:0010976,GO:0010992,GO:0010994,GO:0016043,GO:0016310,GO:0016567,GO:0016740,GO:0019219,GO:0019220,GO:0019221,GO:0019222,GO:0019538,GO:0019725,GO:0019787,GO:0019899,GO:0022008,GO:0022607,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0030154,GO:0030162,GO:0030522,GO:0031098,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031331,GO:0031344,GO:0031346,GO:0031347,GO:0031349,GO:0031371,GO:0031372,GO:0031399,GO:0031401,GO:0031624,GO:0031625,GO:0031974,GO:0031981,GO:0032147,GO:0032268,GO:0032270,GO:0032434,GO:0032436,GO:0032446,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032991,GO:0033554,GO:0033674,GO:0034097,GO:0034622,GO:0034641,GO:0035370,GO:0035556,GO:0035872,GO:0036211,GO:0040012,GO:0042176,GO:0042221,GO:0042275,GO:0042325,GO:0042327,GO:0042592,GO:0042742,GO:0042981,GO:0042995,GO:0043005,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043122,GO:0043123,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043523,GO:0043524,GO:0043549,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044389,GO:0044390,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045088,GO:0045089,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045732,GO:0045739,GO:0045859,GO:0045860,GO:0045862,GO:0045893,GO:0045935,GO:0045937,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050795,GO:0050803,GO:0050807,GO:0050896,GO:0051052,GO:0051054,GO:0051090,GO:0051091,GO:0051092,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051258,GO:0051338,GO:0051347,GO:0051403,GO:0051704,GO:0051707,GO:0051716,GO:0051960,GO:0051962,GO:0051963,GO:0051965,GO:0060255,GO:0060284,GO:0060341,GO:0060548,GO:0061057,GO:0061136,GO:0061630,GO:0061631,GO:0061650,GO:0061659,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070423,GO:0070498,GO:0070534,GO:0070555,GO:0070647,GO:0070887,GO:0071310,GO:0071345,GO:0071347,GO:0071704,GO:0071840,GO:0071900,GO:0071902,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0090325,GO:0097458,GO:0098542,GO:0120025,GO:0120035,GO:0140096,GO:1901214,GO:1901215,GO:1901360,GO:1901564,GO:1901800,GO:1902494,GO:1902531,GO:1902533,GO:1902680,GO:1903050,GO:1903052,GO:1903362,GO:1903364,GO:1903506,GO:1903508,GO:1903827,GO:1990234,GO:2000008,GO:2000026,GO:2000058,GO:2000060,GO:2000112,GO:2001020,GO:2001022,GO:2001141
EggNOG free text desc.protein K63-linked ubiquitination
EggNOG OGsKOG0896@1,KOG0896@2759
Ec32 ortholog descriptionubiquitin conjugating enzyme
Ec32 orthologEc-17_002730.1
EC5.99.1.3
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03032,ko03036,ko03400,ko04131
Exons3
Model size438
Cds size438
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6756.16308.1prot_M-pyrifera_M_contig6756.16308.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig6756 2310..4891 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816565.9659681-CDS-M-pyrifera_M_contig6756:2309..24501622816565.9659681-CDS-M-pyrifera_M_contig6756:2309..2450Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6756 2310..2450 +
1692278050.2735472-CDS-M-pyrifera_M_contig6756:2309..24501692278050.2735472-CDS-M-pyrifera_M_contig6756:2309..2450Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6756 2310..2450 +
1622816565.981166-CDS-M-pyrifera_M_contig6756:4221..44371622816565.981166-CDS-M-pyrifera_M_contig6756:4221..4437Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6756 4222..4437 +
1692278050.2857137-CDS-M-pyrifera_M_contig6756:4221..44371692278050.2857137-CDS-M-pyrifera_M_contig6756:4221..4437Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6756 4222..4437 +
1622816565.995856-CDS-M-pyrifera_M_contig6756:4810..48911622816565.995856-CDS-M-pyrifera_M_contig6756:4810..4891Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6756 4811..4891 +
1692278050.296012-CDS-M-pyrifera_M_contig6756:4810..48911692278050.296012-CDS-M-pyrifera_M_contig6756:4810..4891Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6756 4811..4891 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig6756.16308.1

>prot_M-pyrifera_M_contig6756.16308.1 ID=prot_M-pyrifera_M_contig6756.16308.1|Name=mRNA_M-pyrifera_M_contig6756.16308.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=146bp
VPRNFKLLEELEKGEKGVGDHSVSFGLVDGEDIFMTDWNGTILGPNGTQH
EGRLYTLRIHCGEEYPDRCPVVRFVSKLNMGCVDQRSGEVFRNKLQVLAQ
WNRNYGIEQASQGWTRRIGVLVALRNEMAGPSNRRLPQPPEGTEF*
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mRNA from alignment at M-pyrifera_M_contig6756:2310..4891+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig6756.16308.1 ID=mRNA_M-pyrifera_M_contig6756.16308.1|Name=mRNA_M-pyrifera_M_contig6756.16308.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2582bp|location=Sequence derived from alignment at M-pyrifera_M_contig6756:2310..4891+ (Macrocystis pyrifera P11B4 male)
GTGCCCCGCAACTTTAAGCTGTTGGAGGAGCTTGAGAAGGGCGAGAAGGG AGTTGGAGACCATAGCGTGAGCTTCGGCTTGGTAGACGGAGAGGACATCT TCATGACCGACTGGAATGGAACCATCCTGGGGCCCAATGGGGTGCGTCTT GCCTTGCTCTGCAGCAACAGCAGCAGTTTGTGCCGCCGGTCGGTTTCCCA ACGAACTTTCCTGCTGTCCTCTGCCCGATCCTTCGCCCCTCTATTGCGGG GGAATTGCGGGGGACATAGTAATCAGAACCAAAACGAACTTTCCTGCTGT CCTCTGCCCGATCCTTCGCCCCTCTATTGCGGGGGAATTGCGGGGGACAT AGTAATCAGAACCAAATATGGTTGGTATCAAAATAGGAATATATTCACTT CTTGGGTCCATCTTGGGTTCTGATTCGAATTGCCCCGCGTAATAGCTACT TTCCCCACAACACACACAAAGATAGCATCCAGCGGGACAAAGCATGGAAA ACGAGGAAATGCCTGCATGCGAGTTTGTGTATGGTCGGTTGTTTAATCAC TCTTCTTTGTTCGAGCCTGACGTTTTTTTTTTTTTGCCGGATTTCCTCCG GCCATATTTCCTACGTACGGGTGGACGGGGTGTTGGGGAATTCCTTCATG TATTGGGTTTAGGACACTTGTGTTTCCTTTTTTTTTTCAGGTAAACTACG GGGGGTACATGGCAATATATGTATATGCCTGATTTTTGTATTCTATCCTA TGTGGTCAATTGTGTGTTTTCGAAAAGGCAGTCCCAACAGTGGGGGGGGC ACCCTAATGCACACTGCCAATGAAAATGTAATATTGCCCGCCCGCACGCC TCCCAAGGTGTATTCAGTATATTGCGCTGTTCTTGGTAATGGCCATTCCG TTTGGCGGGTTCGGGGTGAGGATAATGGTGAAGAGATAAAAAAATCACCC CTCCTCCCTTGCCCCCACCCACACCTCCGCTCGGAGTGGAAGGCAGGCGT CTGCGGGAGAAGCTCCTGTGCCTGATTTTTCAGGGTTAGGCTTGGTGATT GGTATCTACCCCCCCCCTCGTCCCATGCTTTATTATATTATATATAGGTT AGGTTGGTGTCGATTGGCAACGACACTACAAACAGGCAGCTCACTACTTG AGCTAGACCACCAGGGTACCGCTTTTTTTTTCATTTTTTTTGGCGGTCGG TCACAGCTGGTGGTCTAGTTGTAGATGATTTGTTCGAGGTGAAGAACGTT TACTCCGCTCAAGGGGAATGATCGTATCGCGTACCAGGTAGTGTTTATGG TAAGGCACCCAAGAGACAGATACATGGTACTCCCATTGCTGTCTCTGGAA ATGACTACACCGGAAATTAAATTAACTCGTTGAGCTGTCATAGATATGCA AGCCCACCTCACAAGCGGTTTTTAGTAGGATGCAGCTCACCCTTCATGCG ACTCGCCGGACACCTCACGGCACTTCGCGTTTGGTGCAAGCAATGTCTGC CTGGCCGTGAAAACAAGACCTGCTCCGTCCTGGCATTGTAGGGATGCCAG GGCCTATGGTCATACGACTACGGCCATGCATGATATCAAGTACATCTCTC CTATCGAGTGCACCCACCCCGTTCTCCTGCGGTATCGAGTCCTCCCCCCC CCCCCATACCCGAAGTTAGCGCCCAAGTGTTGAGGGTGTCTCTACTAGGA GTAGGAACGGTGCTCCGTCTTCAACGGGATGCGTGGTCAATGGTGAAATG ACTAAGTCAAGCCATAAATGAGTACGCTCCCCCCCCGCCCGCCCCCCATG CCCCCTTTCCACCCCCCCCTGCCCCACCCTACCCTACCCCACCCTAACTC ACCCCACCCCGCCTCACCCCACCCCCACCCCACCTCACCTCACTTCACTT CATGGGGAACAGACCCAACACGAGGGAAGGCTGTACACGTTGAGGATACA CTGCGGGGAGGAATACCCGGACCGTTGTCCGGTCGTACGGTTCGTGAGCA AGCTTAACATGGGCTGCGTGGATCAGAGAAGCGGAGAAGTGTTCAGGAAC AAGCTGCAGGTGCTGGCGCAGTGGAACAGGAATTACGGCATCGAGCAGGC GAGTCAGGGCTGGACCCGGAGAATCGGCGTTTGTTGTTTGGTGGTGGTGG TGGAGGTGGGGTTGTCTATGGTGATGGCGTAGTTGGTTCGTTGTTGTTGT TGTTTCTGGTGTTGTTTGTGTTGGTATTGGTGCTGGTGTTGTTGTTGTTG TTGTTTGTTGCTGTTTGTTGCTGTTGCTGTTATCATTGCTTGTTGCTGCT GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTGTTGCTGTTGTTG CTGTTGCTGTTGTTGTTGCTTGTTGCTGTTGCTGTTGCTGTTGCTGTTTT CCTTGTTTTGAACAGTGGTGCCCTCTCCTGTGTGCCCGCCCACCGCCCGC TAACATGTCGCGATTTTCCCGGCTTGAAAAAAAACTATGTTTTTTTGGCA GGTGCTGGTGGCCTTGAGGAATGAGATGGCGGGCCCCTCGAACCGCCGAC TTCCGCAGCCACCCGAGGGGACGGAGTTCTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig6756:2310..4891+

>mRNA_M-pyrifera_M_contig6756.16308.1 ID=mRNA_M-pyrifera_M_contig6756.16308.1|Name=mRNA_M-pyrifera_M_contig6756.16308.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=876bp|location=Sequence derived from alignment at M-pyrifera_M_contig6756:2310..4891+ (Macrocystis pyrifera P11B4 male)
GTGCCCCGCAACTTTAAGCTGTTGGAGGAGCTTGAGAAGGGCGAGAAGGG
AGTTGGAGACCATAGCGTGAGCTTCGGCTTGGTAGACGGAGAGGACATCT
TCATGACCGACTGGAATGGAACCATCCTGGGGCCCAATGGGGTGCCCCGC
AACTTTAAGCTGTTGGAGGAGCTTGAGAAGGGCGAGAAGGGAGTTGGAGA
CCATAGCGTGAGCTTCGGCTTGGTAGACGGAGAGGACATCTTCATGACCG
ACTGGAATGGAACCATCCTGGGGCCCAATGGGACCCAACACGAGGGAAGG
CTGTACACGTTGAGGATACACTGCGGGGAGGAATACCCGGACCGTTGTCC
GGTCGTACGGTTCGTGAGCAAGCTTAACATGGGCTGCGTGGATCAGAGAA
GCGGAGAAGTGTTCAGGAACAAGCTGCAGGTGCTGGCGCAGTGGAACAGG
AATTACGGCATCGAGCAGGCGAGTCAGGGCTGGACCCGGAGAATCGGCAC
CCAACACGAGGGAAGGCTGTACACGTTGAGGATACACTGCGGGGAGGAAT
ACCCGGACCGTTGTCCGGTCGTACGGTTCGTGAGCAAGCTTAACATGGGC
TGCGTGGATCAGAGAAGCGGAGAAGTGTTCAGGAACAAGCTGCAGGTGCT
GGCGCAGTGGAACAGGAATTACGGCATCGAGCAGGCGAGTCAGGGCTGGA
CCCGGAGAATCGGCGTGCTGGTGGCCTTGAGGAATGAGATGGCGGGCCCC
TCGAACCGCCGACTTCCGCAGCCACCCGAGGGGACGGAGTTCTAGGTGCT
GGTGGCCTTGAGGAATGAGATGGCGGGCCCCTCGAACCGCCGACTTCCGC
AGCCACCCGAGGGGACGGAGTTCTAG
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