mRNA_M-pyrifera_M_contig66553.16137.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig66553.16137.1 vs. uniprot
Match: A0A517PT31_9PLAN (Calx-beta domain protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517PT31_9PLAN) HSP 1 Score: 463 bits (1192), Expect = 4.930e-147 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 1
Query: 1 LYGLAAAADLEKQNVEGEYQQGNFQDEAAVVFADTIFDFTSGTVGTDEFNQNLVNRLAFTATHEAFHTFSIFHTTSPLSYGGVITQYAKYSEDPYEVIRYDLTQRQDGEKVTEPNNYLQIANDPEIGLKDNNGQNDGDGIPDLAYVTGTGGHDRITLTQIDADTVSVMVIPYSDSAKTQQYTDTNEPLFEAYTIDLNLDTEGEILIDAGLGDDEIILDSSLSAQIRLRGGSGNDILK 711
LYGLAAAADLEKQNVEGEYQQGNFQDEAAVVFADTIFDFTSGTVGTDEFNQNLVNRLAFTATHEAFHTFSIFHTTSPLSYGGVITQYAKYSEDPYEVIRYDLTQRQDGEKVTEPNNYLQIANDPEIGLKDNNGQNDGDGIPDLAYVTGTGGHDRITLTQIDADTVSVMVIPYSDSAKTQQYTDTNEPLFEAYTIDLNLDTEGEILIDAGLGDDEIILDSSLSAQIRLRGGSGNDILK
Sbjct: 221 LYGLAAAADLEKQNVEGEYQQGNFQDEAAVVFADTIFDFTSGTVGTDEFNQNLVNRLAFTATHEAFHTFSIFHTTSPLSYGGVITQYAKYSEDPYEVIRYDLTQRQDGEKVTEPNNYLQIANDPEIGLKDNNGQNDGDGIPDLAYVTGTGGHDRITLTQIDADTVSVMVIPYSDSAKTQQYTDTNEPLFEAYTIDLNLDTEGEILIDAGLGDDEIILDSSLSAQIRLRGGSGNDILK 457
BLAST of mRNA_M-pyrifera_M_contig66553.16137.1 vs. uniprot
Match: A0A518FVZ5_9PLAN (Calx-beta domain protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FVZ5_9PLAN) HSP 1 Score: 333 bits (855), Expect = 9.750e-102 Identity = 177/240 (73.75%), Postives = 197/240 (82.08%), Query Frame = 1
Query: 1 LYGLAAAADLEKQ----NVEGEYQQGNFQDEAAVVFADTIFDFTSGTVGTDEFNQNLVNRLAFTATHEAFHTFSIFHTTSPLSYGGVITQYAKYSEDPYEVIRYDLTQRQDGEKVTEPNNYLQIANDPEIGLKDNNGQNDGDGIPDLAYVTGTGGHDRITLTQIDADTVSVMVIPYSDSAKTQQYTDTNEPLFEAYTIDLNLDTEGEILIDAGLGDDEIILDSSLSAQIRLRGGSGNDIL 708
L G AA DL K N E EYQQGN +DE+ +VFADTI TSGT GTDEFNQNLVN+LAFTATHEAFHTFSI+HTTSPLSYGGVITQY Y+EDPY+VIRYDLTQRQD KVTEPNNYLQIANDPEIGL++ D +G P LAYVTGTG +DRITLTQID DTVSV V PYS+ A+T+Q T T EPL E YTIDLNLDT GEILIDAGLGDDEII+DSS++A IR+RGGSG+D +
Sbjct: 215 LLGRAAPDDLNKTIVNANNEIEYQQGNHEDESVIVFADTILGATSGTYGTDEFNQNLVNKLAFTATHEAFHTFSIYHTTSPLSYGGVITQYGNYNEDPYQVIRYDLTQRQDSAKVTEPNNYLQIANDPEIGLRE-----DSNGTPLLAYVTGTGANDRITLTQIDPDTVSVTVTPYSNHARTKQDTQTGEPLSETYTIDLNLDTTGEILIDAGLGDDEIIIDSSINASIRVRGGSGDDTI 449
BLAST of mRNA_M-pyrifera_M_contig66553.16137.1 vs. uniprot
Match: A0A2E7KAE1_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Gimesia sp. TaxID=2024833 RepID=A0A2E7KAE1_9PLAN) HSP 1 Score: 239 bits (609), Expect = 1.070e-68 Identity = 139/246 (56.50%), Postives = 170/246 (69.11%), Query Frame = 1
Query: 4 YGLAAAADLEKQNVEGEYQQGNFQDEAAVVFADTIFDFTSGTVGTDEFNQNLVNRLAFTATHEAFHTFSIFHTTSPLSYGGVITQYAK--YSEDPYEVIRYDLTQRQDGEKVTEPN-------NYLQIANDPEIGLKDNNGQNDGDGIPDLAYVTGTGGHDRITLTQIDADTVSVMVIPYSDSAKTQQYTDTNEPLFEAYTIDLNLDTEGEILIDAGLGDDEIILDSSLSA-QIRLRGGSGNDILK 711
YG+AAAADL + + EY GN DE+ VFAD +F +G GT EFN++LV RLA+T+THEAFHTFS+ H+ LS G VI + + Y E PY V R+DL + E++ +PN NY IANDP+IGL+D+N IPDLAYVTGTG HDRITLTQIDADTVSV V PY DS KTQQY D+ + + E YTIDLNL TEG+ILIDAG+GDDE ++D + A I LRGG G D+LK
Sbjct: 214 YGIAAAADLIDDSQDEEYH-GNRYDESVQVFADVVFKSIAGVEGTAEFNESLVQRLAYTSTHEAFHTFSLHHSAEQLSAGDVILEGVENTYREFPYMVTRFDLPR---SEEILDPNISFYSIDNYEIIANDPDIGLRDDNRNL----IPDLAYVTGTGAHDRITLTQIDADTVSVTVTPYHDSLKTQQYDDSGQLVSETYTIDLNLHTEGKILIDAGMGDDEFVIDFNTDAFSIELRGGGGTDVLK 451
BLAST of mRNA_M-pyrifera_M_contig66553.16137.1 vs. uniprot
Match: UPI00118C4F13 (cadherin-like domain-containing protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=UPI00118C4F13) HSP 1 Score: 232 bits (592), Expect = 2.090e-66 Identity = 137/246 (55.69%), Postives = 166/246 (67.48%), Query Frame = 1
Query: 4 YGLAAAADLEKQNVEGEYQQGNFQDEAAVVFADTIFDFTSGTVGTDEFNQNLVNRLAFTATHEAFHTFSIFHTTSPLSYGGVITQYAK--YSEDPYEVIRYDLTQRQDGEKVTEPN-------NYLQIANDPEIGLKDNNGQNDGDGIPDLAYVTGTGGHDRITLTQIDADTVSVMVIPYSDSAKTQQYTDTNEPLFEAYTIDLNLDTEGEILIDAGLGDDEIILDSSLSA-QIRLRGGSGNDILK 711
YG+AAAADL + + EY GN DE+ VFAD +F +G GT EFN++LV RLA+T+THEAFHTFS+ H+ LS G VI + + Y E PY V R+DL + E++ +PN NY IAND +IGL+D N IPDLAYVTGTG HDRITLTQIDADTVSV V PY DS KTQ Y D + + E YTIDLNL TEG+ILIDAG+GDDE ++D + A I LRGG G D+LK
Sbjct: 214 YGIAAAADLIDDSQDEEYH-GNRYDESVQVFADVVFKSIAGVEGTAEFNESLVQRLAYTSTHEAFHTFSLHHSAEQLSAGDVILEGVENNYREFPYMVTRFDLPR---SEEILDPNISFYSIDNYEIIANDHDIGLRDENRNL----IPDLAYVTGTGAHDRITLTQIDADTVSVTVTPYHDSLKTQPYDDAGQLVSETYTIDLNLHTEGKILIDAGMGDDEFVIDFNTDAFSIELRGGGGTDVLK 451
BLAST of mRNA_M-pyrifera_M_contig66553.16137.1 vs. uniprot
Match: A0A517WYN5_9PLAN (Uncharacterized protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WYN5_9PLAN) HSP 1 Score: 224 bits (570), Expect = 1.600e-63 Identity = 132/229 (57.64%), Postives = 155/229 (67.69%), Query Frame = 1
Query: 1 LYGLAAAADLEKQNVEGEYQQGNFQDEAAVVFADTIFDFTSGTVGTDEFNQNLVNRLAFTATHEAFHTFSIFHTTSPLSYGGVITQYAKYSEDPYEVIRYDLTQRQDGEKVTEPNNYLQIANDPEIGLKDNNGQNDGDGIPDLAYVTGTGGHDRITLTQIDADTVSVMVIPYSDSAKTQQYTDTNEPLFEAYTIDLNLDTEGEILIDAGLGDDEIILDSSLSAQIRLRG 687
LYG+AAA+DL N G Y QGN DEAA F DTIFD T+GT GT FN NL R+A+TATHEAFHTFS HTT L G VI + EDP+ V R+DL RQ G VT NNY IA+D +IGL+D D DG PDLAYVTGTGGHD+ITLT + VSV V YSD+A+T ++YTIDL+ DTEGEILIDAG+GDDEII+D+S+ A R+RG
Sbjct: 208 LYGIAAASDL-FTNTLGVYSQGNQYDEAAHTFIDTIFDDTTGTSGTAAFNANLSQRIAYTATHEAFHTFSAIHTTDSLDAGDVIELGSATREDPFMVTRFDLN-RQGGTSVTTKNNYELIASDSDIGLRDT----DSDGTPDLAYVTGTGGHDQITLTDAGSGIVSVTVNAYSDAARTMLVGT------DSYTIDLSSDTEGEILIDAGIGDDEIIIDASIEASFRVRG 424
BLAST of mRNA_M-pyrifera_M_contig66553.16137.1 vs. uniprot
Match: UPI0018D7116A (Ig-like domain-containing protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=UPI0018D7116A) HSP 1 Score: 202 bits (514), Expect = 6.080e-56 Identity = 119/232 (51.29%), Postives = 160/232 (68.97%), Query Frame = 1
Query: 7 GLAAAADL-EKQNVEGE--YQQGNFQDEAAVVFADTIFDFTSGTVGTDEFNQNLVNRLAFTATHEAFHTFSIFHTTSPLSYGGVITQYAKYS--EDPYEVIRYDLTQRQDGEKVTEPNNYLQIANDPEIGLKDNNGQNDGDGIPDLAYVTGTGGHDRITLTQIDADTVSVMVIPYSDSAKTQQYTDTNEPLFEAYTIDLNLDTEGEILIDAGLGDDEIILDSSLSAQIRLRG 687
G AAA+DL E V+G Y QGN +DEA +VFADTIF T+GT GT EF +NL RLA+TATHEAFHTFS++HTT L++G VI + + EDP+ V R+DL + D KVT NNY IA+D +IGL+D+N GIPD+AYVTGTG HDRIT+T+ + V++ YSD+A T + E Y+I+L+ +++G +LID G+GDDEI++DS++ A IR+RG
Sbjct: 216 GAAAASDLYESVLVDGVTVYGQGNRRDEAVLVFADTIFSSTNGTQGTTEFGENLAQRLAYTATHEAFHTFSLWHTTGQLAHGDVILTGVENNDREDPFMVTRFDLDRVNDV-KVTNYNNYGLIASDTDIGLRDSNNN----GIPDIAYVTGTGAHDRITITKGTGSNIDVLIEAYSDTAMTSSLA-----MPETYSINLDTESDGTLLIDLGIGDDEIVIDSTIDALIRVRG 437
BLAST of mRNA_M-pyrifera_M_contig66553.16137.1 vs. uniprot
Match: A0A2D6HJ56_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HJ56_9BACT) HSP 1 Score: 199 bits (505), Expect = 9.640e-55 Identity = 119/243 (48.97%), Postives = 153/243 (62.96%), Query Frame = 1
Query: 1 LYGLAAAADLEKQNVEGEYQQGNFQDEAAVVFADTIFDFTSGTVGTDEFNQNLVNRLAFTATHEAFHTFSIFHTTSP---------LSYGGVITQYAKYSEDPYEVIRYDLTQRQDGEKVTEPNNYLQIANDPEIGLKDNNGQNDGDGIPDLAYVTGTGGHDRITLTQIDADTVSVMVIPYSDSAKTQQYTDTNEPLFEAYTIDLNLDTEGEILIDAGLGDDEIILDSSLSAQIRLRGGSGND 702
L+G+AAA DL Q GN QDEA + F+DT+F+ SG GT FNQNL +RLA+TATHEAFHTF+ HTT ++ G VI + EDP+ V R+DL +RQDG V EPNNYLQ A D +IGL+D N G PD A+V+GTG HD ITLT D +TV+V V YS+ A+T E+YTI+L DT+GEILID G+ +D I +D+++ A R+RGG+G D
Sbjct: 210 LFGIAAADDLFAQ-------AGNDQDEATLTFSDTVFNSVSGVPGTPAFNQNLAHRLAYTATHEAFHTFTYVHTTDAGGANNGDRLMTSGDVIRLGSVTREDPFFVTRFDL-ERQDGFGVAEPNNYLQAAGDADIGLRDGNAN----GTPDFAFVSGTGAHDNITLTSGDPNTVNVQVNAYSNPARTVLIDS------ESYTINLTTDTDGEILIDGGINNDNISIDAAIDATYRIRGGTGTD 434
BLAST of mRNA_M-pyrifera_M_contig66553.16137.1 vs. uniprot
Match: A0A517RIR5_9PLAN (Calx-beta domain protein n=2 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RIR5_9PLAN) HSP 1 Score: 179 bits (454), Expect = 5.810e-48 Identity = 102/199 (51.26%), Postives = 133/199 (66.83%), Query Frame = 1
Query: 121 SGTVGTDEFNQNLVNRLAFTATHEAFHTFSIFHTTSPLSYGGVITQYAKYS--EDPYEVIRYDLTQRQDGEKVTEPNNYLQIANDPEIGLKDNNGQNDGDGIPDLAYVTGTGGHDRITLTQIDADTVSVMVIPYSDSAKTQQYTDTNEPLFEAYTIDLNLDTEGEILIDAGLGDDEIILDSSLSAQIRLRGGSGNDILK 711
SGT GT FN L RLA+TATHEAFHT+S+ HTT L+YG VI + + S ++P+ V R+DL R V+E NNY +AND ++GL+D++ GIPDLAYVTGTG HD+I LT DTV+V + YSD A+T Q T +YTIDL DT+GEILIDAG+G DEI++D+++ A R+RGG G D +
Sbjct: 9 SGTPGTSSFNTYLAQRLAYTATHEAFHTYSLRHTTGQLAYGDVILRGPENSVRDEPFMVTRFDLD-RYGNPSVSEYNNYELLANDSDLGLRDDSNN----GIPDLAYVTGTGAHDQIALTNTGTDTVTVTIKAYSDEARTTQIGSTF-----SYTIDLTSDTDGEILIDAGIGVDEIVIDATIDASFRIRGGGGADTFR 197
BLAST of mRNA_M-pyrifera_M_contig66553.16137.1 vs. uniprot
Match: A0A2E8FFN0_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8FFN0_9PLAN) HSP 1 Score: 162 bits (409), Expect = 1.760e-42 Identity = 103/243 (42.39%), Postives = 134/243 (55.14%), Query Frame = 1
Query: 1 LYGLAAAADLEKQNVEGEYQQGNFQDEAAVVFADTIFDFTSGTVGTDEFNQNLVNRLAFTATHEAFHTFSIFHTTSP------LSYGGVITQYAKYSEDPYEVIRYDLTQRQDGEKVTEPNNYLQIANDPEIGLKDNNGQNDGDGIPDLAYVTGTGGHDRITLTQIDADTVSVMVIPYSDSAKTQQYTDTNEPLFEAYTIDLNLDTEGEILIDAGLGDDEIILDSSLSAQIRLRGGSGNDILK 711
LYGLAA DL GN DEA + F DTI TSG GTDEFN+NL +R+A+T HEA HTF ++HT LS G I + E V R+DL G V NNY +A+DP+IGL+D+ D DG+PD AYVTGTG HD I LT + V + Y DSA T ++YTI +DTEG ILID+ +GDD + + S+ + +RGG G+D+++
Sbjct: 193 LYGLAAGEDLFSGT-------GNNHDEATLTFTDTIVGATSGVAGTDEFNENLAHRVAYTMVHEAMHTFGLYHTKGLTAQEQLLSSGDTIRHGSITRETNNIVTRFDLQLNGSGTLV---NNYETLASDPDIGLRDS----DHDGVPDFAYVTGTGAHDIIQLTDLGGGVTQVQIDAYFDSALTTLIRS------DSYTITQGVDTEGLILIDSSVGDDLVEISGSVMTSVMVRGGEGDDVIE 415
BLAST of mRNA_M-pyrifera_M_contig66553.16137.1 vs. uniprot
Match: A0A2E7NVX5_9PLAN (Uncharacterized protein n=4 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7NVX5_9PLAN) HSP 1 Score: 160 bits (404), Expect = 1.180e-41 Identity = 99/243 (40.74%), Postives = 139/243 (57.20%), Query Frame = 1
Query: 1 LYGLAAAADLEKQNVEGEYQQGNFQDEAAVVFADTIFDFTSGTVGTDEFNQNLVNRLAFTATHEAFHTFSIFHTT--SP----LSYGGVITQYAKYSEDPYEVIRYDLTQRQDGEKVTEPNNYLQIANDPEIGLKDNNGQNDGDGIPDLAYVTGTGGHDRITLTQIDADTVSVMVIPYSDSAKTQQYTDTNEPLFEAYTIDLNLDTEGEILIDAGLGDDEIILDSSLSAQIRLRGGSGNDILK 711
LYG+AA DL GN DEA + F DTI TSG GT+EFN+NL +R+A+T HEA HTF ++HT +P LS G I + E V R+DL G V NNY +A+DP+IGL+D D DG+PD AY+TGTG HD ITLT + V + + DS T ++YTI LDTEG I+ID+ +GDD +++D++++A + ++ G G+D+++
Sbjct: 193 LYGIAAGEDLFSAT-------GNNHDEATLTFTDTIVAATSGISGTEEFNENLAHRVAYTVVHEAMHTFGLYHTKGLTPQERLLSSGDTIRHGSITRETNNIVTRFDLQLFGSGTLV---NNYEILASDPDIGLRDT----DRDGVPDFAYITGTGAHDLITLTDLGGGVTQVQIDAFYDSGMTDLIRS------DSYTITQGLDTEGRIVIDSSVGDDTVLIDAAVTASVMVQAGQGDDVVE 415 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66553.16137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig66553.16137.1 >prot_M-pyrifera_M_contig66553.16137.1 ID=prot_M-pyrifera_M_contig66553.16137.1|Name=mRNA_M-pyrifera_M_contig66553.16137.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=237bp LYGLAAAADLEKQNVEGEYQQGNFQDEAAVVFADTIFDFTSGTVGTDEFNback to top mRNA from alignment at M-pyrifera_M_contig66553:576..1286- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig66553.16137.1 ID=mRNA_M-pyrifera_M_contig66553.16137.1|Name=mRNA_M-pyrifera_M_contig66553.16137.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=711bp|location=Sequence derived from alignment at M-pyrifera_M_contig66553:576..1286- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig66553:576..1286- >mRNA_M-pyrifera_M_contig66553.16137.1 ID=mRNA_M-pyrifera_M_contig66553.16137.1|Name=mRNA_M-pyrifera_M_contig66553.16137.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1422bp|location=Sequence derived from alignment at M-pyrifera_M_contig66553:576..1286- (Macrocystis pyrifera P11B4 male)back to top |