mRNA_M-pyrifera_M_contig6636.16101.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig6636.16101.1 vs. uniprot
Match: D8LJS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS5_ECTSI) HSP 1 Score: 184 bits (466), Expect = 6.160e-56 Identity = 85/112 (75.89%), Postives = 101/112 (90.18%), Query Frame = 1
Query: 4 KPYEYVTVDSPHLASVSEDGRAFAEHLASQEGTNNVVTFRNMRKDARLVVPCRGGQA-GTNYAHLATFVRSAPREQVVKFFGAVGAGLEEEVVSRVDESPVWLSTSGLGVYW 336
KPYEYV VDSP LA+V+ DGR FAEH+AS++GTN+VV+FRN+R+DARLVVPCRGGQ G NYAHLA F+R+APR+QVV+FFGAVG GLE+E+ SR DE+PVWLSTSGLGVYW
Sbjct: 153 KPYEYVLVDSPRLAAVTADGRPFAEHIASRKGTNDVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFLRTAPRDQVVQFFGAVGEGLEDEIASRADETPVWLSTSGLGVYW 264
BLAST of mRNA_M-pyrifera_M_contig6636.16101.1 vs. uniprot
Match: A0A6H5L146_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L146_9PHAE) HSP 1 Score: 182 bits (463), Expect = 1.240e-55 Identity = 85/112 (75.89%), Postives = 100/112 (89.29%), Query Frame = 1
Query: 4 KPYEYVTVDSPHLASVSEDGRAFAEHLASQEGTNNVVTFRNMRKDARLVVPCRGGQA-GTNYAHLATFVRSAPREQVVKFFGAVGAGLEEEVVSRVDESPVWLSTSGLGVYW 336
KPYEYV VDSP LA+V+ DG FAEH+AS++GT++VV+FRN+R+DARLVVPCRGGQ G NYAHLA FVR+APR+QVVKFFGAVG GLE+E+ SR DE+PVWLSTSGLGVYW
Sbjct: 150 KPYEYVLVDSPRLAAVTADGSPFAEHIASKQGTDDVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFVRTAPRDQVVKFFGAVGEGLEDEIASRADETPVWLSTSGLGVYW 261
BLAST of mRNA_M-pyrifera_M_contig6636.16101.1 vs. uniprot
Match: UPI001880BA32 (hypothetical protein n=1 Tax=unclassified Coleofasciculus TaxID=2692782 RepID=UPI001880BA32) HSP 1 Score: 102 bits (253), Expect = 7.760e-25 Identity = 51/109 (46.79%), Postives = 69/109 (63.30%), Query Frame = 1
Query: 10 YEYVTVDSPHLASVSEDGRAFAEHLASQEGTNNVVTFRNMRKDARLVVPCRGGQAGTNYAHLATFVRSAPREQVVKFFGAVGAGLEEEVVSRVDESPVWLSTSGLGVYW 336
+E+V VDSP+LA V + FA H A+ +++TF N+ KDA LVVPC T Y H+A F+R AP +Q + +VG LE+ ++DE P+WLSTSGLGVYW
Sbjct: 73 FEFVLVDSPNLAGVQANPSDFASHFAAAGEKESIITFPNLGKDALLVVPCPKASTST-YRHIAAFMREAPTQQKHALWQSVGLALEQ----KLDEHPIWLSTSGLGVYW 176
BLAST of mRNA_M-pyrifera_M_contig6636.16101.1 vs. uniprot
Match: A0A352AGC7_9CYAN (Uncharacterized protein n=1 Tax=Cyanobacteria bacterium UBA9273 TaxID=2055791 RepID=A0A352AGC7_9CYAN) HSP 1 Score: 98.6 bits (244), Expect = 1.660e-23 Identity = 50/109 (45.87%), Postives = 66/109 (60.55%), Query Frame = 1
Query: 10 YEYVTVDSPHLASVSEDGRAFAEHLASQEGTNNVVTFRNMRKDARLVVPCRGGQAGTNYAHLATFVRSAPREQVVKFFGAVGAGLEEEVVSRVDESPVWLSTSGLGVYW 336
+E+V +DSP L V D FA H A+ +VTF N+ KDA LVVPC A T Y H+A F+R AP Q + +VG+ +E+ R++E P+WLSTSGLGV W
Sbjct: 73 FEFVLIDSPQLVDVQADSSDFAHHFAAAGENELIVTFPNLGKDALLVVPCPQASAST-YGHIAAFIREAPEHQKHALWQSVGSAVEQ----RLNEHPLWLSTSGLGVSW 176
BLAST of mRNA_M-pyrifera_M_contig6636.16101.1 vs. uniprot
Match: A0A6B3M9Q3_9CYAN (Uncharacterized protein n=1 Tax=Symploca sp. SIO2E9 TaxID=2607812 RepID=A0A6B3M9Q3_9CYAN) HSP 1 Score: 98.6 bits (244), Expect = 2.690e-23 Identity = 48/109 (44.04%), Postives = 72/109 (66.06%), Query Frame = 1
Query: 10 YEYVTVDSPHLASVSEDGRAFAEHLASQEGTNNVVTFRNMRKDARLVVPCRGGQAGTNYAHLATFVRSAPREQVVKFFGAVGAGLEEEVVSRVDESPVWLSTSGLGVYW 336
+E+VT++SP LA+V + AFA+H+ + V F N+ DA L+ PC+ G +Y HLA FVR AP++Q+ KF+ +G LE+ + +R + P+W+STSGLGVYW
Sbjct: 92 FEFVTLNSPQLANVLPEPDAFAQHIGDSMNRDLVKVFPNLGGDALLIAPCQNGPQ-QHYTHLAKFVRCAPKKQIDKFWRTIGYTLEQTLQAR-EPHPLWVSTSGLGVYW 198
BLAST of mRNA_M-pyrifera_M_contig6636.16101.1 vs. uniprot
Match: A0A846AAJ9_9CYAN (Uncharacterized protein n=1 Tax=Leptolyngbya sp. SIO4C5 TaxID=2607774 RepID=A0A846AAJ9_9CYAN) HSP 1 Score: 96.7 bits (239), Expect = 1.310e-22 Identity = 51/111 (45.95%), Postives = 70/111 (63.06%), Query Frame = 1
Query: 4 KPYEYVTVDSPHLASVSEDGRAFAEHLASQEGTNNVVTFRNMRKDARLVVPCRGGQAGTNYAHLATFVRSAPREQVVKFFGAVGAGLEEEVVSRVDESPVWLSTSGLGVYW 336
+P+E +DSP LA V+ D +AFA++L + E + V F N++ D LVVPCRG Q YAHLA FVRSAP Q + VG + +++ + P+W+STSGLGVYW
Sbjct: 82 QPFECCLIDSPQLAKVTADPQAFADYLHA-ERCDEVQAFPNLKGDTLLVVPCRGSQQ-QQYAHLAAFVRSAPTPQTHALWQVVGRSVAR-LLNEYGQQPLWVSTSGLGVYW 189
BLAST of mRNA_M-pyrifera_M_contig6636.16101.1 vs. uniprot
Match: A0A1Z4VMG1_9GAMM (Uncharacterized protein n=4 Tax=Thiohalobacter TaxID=1273155 RepID=A0A1Z4VMG1_9GAMM) HSP 1 Score: 94.4 bits (233), Expect = 1.060e-21 Identity = 53/112 (47.32%), Postives = 66/112 (58.93%), Query Frame = 1
Query: 4 KPYEYVTVDSPHLASVSEDGRAFAEHLASQEGTNNVVTFRNMRKDARLVVPCRGGQAGTN-YAHLATFVRSAPREQVVKFFGAVGAGLEEEVVSRVDESPVWLSTSGLGVYW 336
+PYE V VD+P LA + D +FA+ G + F N DARL+ PC QA T+ YAHL TFVR+AP Q F+ VGA L + S +P+WLSTSGLGVYW
Sbjct: 80 RPYEQVCVDAPSLAGIRPDPHSFADQFDRHCGGGGIAEFANPGGDARLIAPCP--QASTDCYAHLLTFVRTAPAAQCDAFWRRVGAALGRALSS----TPLWLSTSGLGVYW 185
BLAST of mRNA_M-pyrifera_M_contig6636.16101.1 vs. uniprot
Match: A0A661FR64_9GAMM (Uncharacterized protein n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661FR64_9GAMM) HSP 1 Score: 94.0 bits (232), Expect = 1.190e-21 Identity = 49/111 (44.14%), Postives = 68/111 (61.26%), Query Frame = 1
Query: 4 KPYEYVTVDSPHLASVSEDGRAFAEHLASQEGTNNVVTFRNMRKDARLVVPCRGGQAGTNYAHLATFVRSAPREQVVKFFGAVGAGLEEEVVSRVDESPVWLSTSGLGVYW 336
+ +E+V V+SP LA + + RAFA A+ +V+ F N+ DA LVVPC G Y+ ++TF R AP +Q + + VGA LE+++ R PVWLSTSGLGVYW
Sbjct: 74 REFEFVLVESPQLAGIRTNERAFANQFAAARPEASVIEFSNLGGDATLVVPCLQGPISA-YSQISTFARLAPADQQHQLWALVGATLEQQLSER----PVWLSTSGLGVYW 179
BLAST of mRNA_M-pyrifera_M_contig6636.16101.1 vs. uniprot
Match: A0A3B0VAL2_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0VAL2_9ZZZZ) HSP 1 Score: 92.8 bits (229), Expect = 2.790e-21 Identity = 54/111 (48.65%), Postives = 67/111 (60.36%), Query Frame = 1
Query: 4 KPYEYVTVDSPHLASVSEDGRAFAEHLASQEGTNNVVTFRNMRKDARLVVPCRGGQAGTNYAHLATFVRSAPREQVVKFFGAVGAGLEEEVVSRVDESPVWLSTSGLGVYW 336
+P+E+V VD+P LA V + RAFA + ++ VV F N+ DA LVVPC A T Y HLATF R AP EQ F+ VG V + V E P+W+STSGLGVYW
Sbjct: 71 RPFEFVLVDAPQLAQVQAEPRAFASYFSADP----VVDFGNLGGDAHLVVPCPQ-TAVTAYPHLATFSRLAPIEQQHHFWQRVGTA----VSNHVGERPLWVSTSGLGVYW 172
BLAST of mRNA_M-pyrifera_M_contig6636.16101.1 vs. uniprot
Match: A0A2E9JVB4_9GAMM (Uncharacterized protein n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A2E9JVB4_9GAMM) HSP 1 Score: 92.4 bits (228), Expect = 5.280e-21 Identity = 50/110 (45.45%), Postives = 61/110 (55.45%), Query Frame = 1
Query: 7 PYEYVTVDSPHLASVSEDGRAFAEHLASQEGTNNVVTFRNMRKDARLVVPCRGGQAGTNYAHLATFVRSAPREQVVKFFGAVGAGLEEEVVSRVDESPVWLSTSGLGVYW 336
P+E V V+SP L+ V+ D F L + + TF N+ DA L+ PC G AG YAHLA FVR AP + F+ VGA L + PVWLSTSGLGVYW
Sbjct: 77 PFECVVVNSPALSGVAADSGPFGSQLDRLHSPDGIATFENLGGDALLIAPCTGQGAGA-YAHLAIFVRHAPLQLQRTFWARVGAALAASLAGN----PVWLSTSGLGVYW 181 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6636.16101.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig6636.16101.1 >prot_M-pyrifera_M_contig6636.16101.1 ID=prot_M-pyrifera_M_contig6636.16101.1|Name=mRNA_M-pyrifera_M_contig6636.16101.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=113bp SKPYEYVTVDSPHLASVSEDGRAFAEHLASQEGTNNVVTFRNMRKDARLVback to top mRNA from alignment at M-pyrifera_M_contig6636:5020..6271- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig6636.16101.1 ID=mRNA_M-pyrifera_M_contig6636.16101.1|Name=mRNA_M-pyrifera_M_contig6636.16101.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1252bp|location=Sequence derived from alignment at M-pyrifera_M_contig6636:5020..6271- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig6636:5020..6271- >mRNA_M-pyrifera_M_contig6636.16101.1 ID=mRNA_M-pyrifera_M_contig6636.16101.1|Name=mRNA_M-pyrifera_M_contig6636.16101.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=678bp|location=Sequence derived from alignment at M-pyrifera_M_contig6636:5020..6271- (Macrocystis pyrifera P11B4 male)back to top |