mRNA_M-pyrifera_M_contig66168.16062.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig66168.16062.1 vs. uniprot
Match: A0A397JX47_9GLOM (Ubiquitinyl hydrolase 1 n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397JX47_9GLOM) HSP 1 Score: 65.5 bits (158), Expect = 2.450e-9 Identity = 43/102 (42.16%), Postives = 59/102 (57.84%), Query Frame = 1
Query: 232 VLSDASRRFFFLRLPPVVVFHVQRFEAVGG---VRLMKRSDAVEFGETVELGKCV--ARKPGEP----------KARWLYALVAVVVHLGASLSSGHYIAYV 492
VL DA++R+FF LPPV+VFH++RF+ +G V + K D V+F E +++ V + K G+ R Y L VVVH G SL +GHYIAYV
Sbjct: 1040 VLQDANKRYFFDTLPPVLVFHLKRFQQIGSRWSVTMRKIDDFVKFEEEIDVTDFVVPSEKVGDADDEDGLLSNENERKKYRLYGVVVHQG-SLYNGHYIAYV 1140
BLAST of mRNA_M-pyrifera_M_contig66168.16062.1 vs. uniprot
Match: A0A397S2V4_9GLOM (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397S2V4_9GLOM) HSP 1 Score: 61.2 bits (147), Expect = 6.910e-8 Identity = 43/114 (37.72%), Postives = 56/114 (49.12%), Query Frame = 1
Query: 232 VLSDASRRFFFLRLPPVVVFHVQRFEAVGG---VRLMKRSDAVEFGETVELGKCVARK------------------------PGEPKARWLYALVAVVVHLGASLSSGHYIAYV 492
+L A +R+ F LPPV+VFH++RF+ VGG V + K D V F E +++G V P + K Y L VVVHLG SL +GHYIAYV
Sbjct: 681 MLRKAYKRYLFDSLPPVLVFHLKRFQQVGGRWSVSMRKIDDFVAFDEELDVGDFVVPPEIEKKDEENGINNGHIIDNETQSLPKQNKQNTKYRLYGVVVHLG-SLYNGHYIAYV 793
BLAST of mRNA_M-pyrifera_M_contig66168.16062.1 vs. uniprot
Match: A0A2Z6QUH0_9GLOM (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6QUH0_9GLOM) HSP 1 Score: 60.1 bits (144), Expect = 1.720e-7 Identity = 44/114 (38.60%), Postives = 56/114 (49.12%), Query Frame = 1
Query: 232 VLSDASRRFFFLRLPPVVVFHVQRFEAVGG---VRLMKRSDAVEFGETVELGKCVA----RKPGEP--------------------KARWLYALVAVVVHLGASLSSGHYIAYV 492
+L A +R+ F LPPV+VFH++RF+ VGG V + K D V F E +++G V K E K Y L VVVHLG SL +GHYIAYV
Sbjct: 633 ILRKAYKRYLFDSLPPVLVFHLKRFQQVGGRWSVSMKKIDDFVAFDEELDVGDFVVPPEIEKKNEENGVNNGHIIDGNTHSLSKQNKQHTKYRLYGVVVHLG-SLYNGHYIAYV 745
BLAST of mRNA_M-pyrifera_M_contig66168.16062.1 vs. uniprot
Match: A0A397U9G4_9GLOM (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397U9G4_9GLOM) HSP 1 Score: 59.7 bits (143), Expect = 2.370e-7 Identity = 41/108 (37.96%), Postives = 56/108 (51.85%), Query Frame = 1
Query: 232 VLSDASRRFFFLRLPPVVVFHVQRFEAVGG---VRLMKRSDAVEFGETVELGKCV------------------ARKPGEPKARWLYALVAVVVHLGASLSSGHYIAYV 492
+L A +R+ F LPPV+VFH++RF+ VGG V + K D V F E +++ + + P E + Y L VVVHLG SL +GHYIAYV
Sbjct: 725 ILRKARKRYLFDSLPPVLVFHLKRFQQVGGRFSVSMKKIDDFVSFEEEIDVRDFIVPPGSEGEEMEDEDDESGSELPSESR-NTKYRLYGVVVHLG-SLYNGHYIAYV 830
BLAST of mRNA_M-pyrifera_M_contig66168.16062.1 vs. uniprot
Match: A0A372QTT2_9GLOM (Ubiquitin carboxyl-terminal hydrolase n=9 Tax=Rhizophagus TaxID=1129544 RepID=A0A372QTT2_9GLOM) HSP 1 Score: 59.7 bits (143), Expect = 2.370e-7 Identity = 43/114 (37.72%), Postives = 55/114 (48.25%), Query Frame = 1
Query: 232 VLSDASRRFFFLRLPPVVVFHVQRFEAVGG---VRLMKRSDAVEFGETVELGKCVARKPGEPK------------------------ARWLYALVAVVVHLGASLSSGHYIAYV 492
+L A +R+ F LPPV+VFH++RF+ VGG V + K D V F E +++G V E K Y L VVVHLG SL +GHYIAYV
Sbjct: 729 ILRKAYKRYLFDSLPPVLVFHLKRFQQVGGRWSVSMKKIDDFVAFDEELDVGDFVVPPEIEKKNENGINNGHIIDDNNTHSLLKQNKKHTKYRLYGVVVHLG-SLYNGHYIAYV 841
BLAST of mRNA_M-pyrifera_M_contig66168.16062.1 vs. uniprot
Match: A0A0K2UGW7_LEPSM (Ubiquitin carboxylterminal hydrolase 1like [Bombus terrestris] n=3 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2UGW7_LEPSM) HSP 1 Score: 56.2 bits (134), Expect = 3.400e-6 Identity = 32/90 (35.56%), Postives = 48/90 (53.33%), Query Frame = 1
Query: 235 LSDASRRFFFLRLPPVVVFHVQRFEAVGGVRLMKRSD---AVEFGETVELGKCVARKPGEPKARWLYALVAVVVHLGASLSSGHYIAYVR 495
L++A R + LP ++V ++RF A G M + + F KC + EP+ Y L AV++HLG +L+SGHYI+YVR
Sbjct: 270 LNEAQRSVTYELLPKIMVLQLKRFTATGSKTYMSKINDYIPTPFSMDCFCTKCTDKSSREPRHH--YRLYAVIMHLGGTLASGHYISYVR 357
BLAST of mRNA_M-pyrifera_M_contig66168.16062.1 vs. uniprot
Match: A0A5J9W8M8_9POAL (USP domain-containing protein (Fragment) n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9W8M8_9POAL) HSP 1 Score: 56.2 bits (134), Expect = 3.550e-6 Identity = 32/86 (37.21%), Postives = 49/86 (56.98%), Query Frame = 1
Query: 238 SDASRRFFFLRLPPVVVFHVQRFEAVGGVRLMKRSDAVEFGETVELGKCVARKPGEPKARWLYALVAVVVHLGASLSSGHYIAYVR 495
DA + +LPPV+ H++RF ++ K + V F E +++G+ + + E K Y L VV H+G SL+SGHY+AYVR
Sbjct: 394 KDADKTLVISKLPPVLTLHLKRFVRENNEQV-KVTGHVSFEENLDVGQFMDPR-SEDKDNSRYCLSGVVEHVGDSLNSGHYVAYVR 477
BLAST of mRNA_M-pyrifera_M_contig66168.16062.1 vs. uniprot
Match: A0A433A210_9FUNG (USP domain-containing protein (Fragment) n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433A210_9FUNG) HSP 1 Score: 54.7 bits (130), Expect = 1.200e-5 Identity = 33/93 (35.48%), Postives = 53/93 (56.99%), Query Frame = 1
Query: 229 LVLSDASRRFFFLRLPPVVVFHVQRFEAVG----GVRLMKRSDAVEFGETVELGKCVARKPGEPKARWLYALVAVVVHLGASLSSGHYIAYVR 495
L + DA ++ P V+ H++RF+ G G+ K +EF ET++L + V+ PG+ LY L AV+VH+GAS +SGHY +++
Sbjct: 300 LSMVDARKQMTIHHAPMVLAVHLKRFQFGGYSQFGMDGEKIDKHIEFSETLDLHEHVS--PGQESDIGLYRLYAVLVHVGASCTSGHYHCFIK 390
BLAST of mRNA_M-pyrifera_M_contig66168.16062.1 vs. uniprot
Match: A0A433QLH2_9FUNG (USP domain-containing protein (Fragment) n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QLH2_9FUNG) HSP 1 Score: 54.7 bits (130), Expect = 1.280e-5 Identity = 33/93 (35.48%), Postives = 53/93 (56.99%), Query Frame = 1
Query: 229 LVLSDASRRFFFLRLPPVVVFHVQRFEAVG----GVRLMKRSDAVEFGETVELGKCVARKPGEPKARWLYALVAVVVHLGASLSSGHYIAYVR 495
L + DA ++ P V+ H++RF+ G G+ K +EF ET++L + V+ PG+ LY L AV+VH+GAS +SGHY +++
Sbjct: 355 LSMVDARKQMTIHHAPMVLAVHLKRFQFGGYSQFGMDGEKIDKHIEFSETLDLHEHVS--PGQESDIGLYRLYAVLVHVGASCTSGHYHCFIK 445
BLAST of mRNA_M-pyrifera_M_contig66168.16062.1 vs. uniprot
Match: D2VYU4_NAEGR (Ubiquitinyl hydrolase 1 n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VYU4_NAEGR) HSP 1 Score: 53.9 bits (128), Expect = 2.380e-5 Identity = 33/89 (37.08%), Postives = 51/89 (57.30%), Query Frame = 1
Query: 235 LSDASRRFFFLRLPPVVVFHVQRFEAVGGVR--LMKRSDAVEFGETVELGKCVARKPGEPKARWLYALVAVVVHLGASLSSGHYIAYVR 495
L DA + FL+LPPV++ H++RFE +R + K +D EF ++LGK ++ + K Y L +V+VH G +S GHY + R
Sbjct: 383 LQDAKKGTNFLKLPPVLMLHLKRFE-YDYIRDLIYKINDRYEFPLEIDLGKYLSEDSEQKKEDNTYVLFSVLVHSG-DVSGGHYYNFAR 469 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66168.16062.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig66168.16062.1 >prot_M-pyrifera_M_contig66168.16062.1 ID=prot_M-pyrifera_M_contig66168.16062.1|Name=mRNA_M-pyrifera_M_contig66168.16062.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=165bp MKEEEEEEEGEEDDNEEKEEVEVEGEEEVEEEAEVEGGEEGVVETEECVSback to top mRNA from alignment at M-pyrifera_M_contig66168:11..505- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig66168.16062.1 ID=mRNA_M-pyrifera_M_contig66168.16062.1|Name=mRNA_M-pyrifera_M_contig66168.16062.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=495bp|location=Sequence derived from alignment at M-pyrifera_M_contig66168:11..505- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig66168:11..505- >mRNA_M-pyrifera_M_contig66168.16062.1 ID=mRNA_M-pyrifera_M_contig66168.16062.1|Name=mRNA_M-pyrifera_M_contig66168.16062.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=990bp|location=Sequence derived from alignment at M-pyrifera_M_contig66168:11..505- (Macrocystis pyrifera P11B4 male)back to top |