mRNA_M-pyrifera_M_contig65553.15936.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig65553.15936.1 vs. uniprot
Match: L8H549_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H549_ACACA) HSP 1 Score: 99.4 bits (246), Expect = 4.620e-23 Identity = 53/159 (33.33%), Postives = 80/159 (50.31%), Query Frame = 1
Query: 61 AHLLHVIASRPDMKHVCEIGFNAGHSALAMLAARDDVHVTSFELGGHSYSYHAASVLDAWFPGRLQLRIGDSTIEIPKFIKDSMEKHGEVQCDMWFIDGGHSYLQILADTMHAIDAVSTRKNQHRKWVAIFDDFGCDMSHCIGTRRAIAALSASGHLIE 537
AH + P ++ VCEIGFNAGHSA L ++ D+ + SF++G H Y AA+ + A FPGR +++GDS +P F+ ++H CD+ +DG H + +D + R + + DD C HC R A L A+G + E
Sbjct: 6 AHYYTAVGRLPFVRTVCEIGFNAGHSAAVWLTSQPDLRLQSFDIGMHGYVGTAANHIKAQFPGRFDIKLGDSVQAVPGFV----QRHPGFVCDVLHVDGAHE------GDIPRLDLANMRALARPHSILLMDDLQCPFPHCRAPRTAWDGLKAAGEIEE 154
BLAST of mRNA_M-pyrifera_M_contig65553.15936.1 vs. uniprot
Match: T1FJP1_HELRO (Uncharacterized protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1FJP1_HELRO) HSP 1 Score: 101 bits (252), Expect = 8.040e-23 Identity = 55/146 (37.67%), Postives = 87/146 (59.59%), Query Frame = 1
Query: 28 DGHTGHSPGKIAHL-LHVIASRPDMKHVCEIGFNAGHSALAMLAARDDVHVTSFELGGHSYSYHAASVLDAWFPGRLQLRIGDSTIEIPKFIKDSMEKHGEVQCDMWFIDGGHSYLQILADTMHAIDAVSTRKNQHRKWVAIFDDF 462
DGHT P + HL LH +ASR ++ VCE GFN GHS+ + AR + SF++G H+Y+ S L+ +PGR + +GDS+I +PKF+K+ H +C+++F+DG H+Y +I + + +S + N + +FDDF
Sbjct: 90 DGHTAMFPTE--HLALHFLASREFVRSVCETGFNYGHSSYTFMTARSGNKILSFDIGHHAYTSVIMSYLNRTYPGRFEGVLGDSSITLPKFVKE----HPNHRCNLFFVDGSHTY-KIGYSDLKSFSKISDKNN-----IIVFDDF 223
BLAST of mRNA_M-pyrifera_M_contig65553.15936.1 vs. uniprot
Match: A0A7S1RWT2_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RWT2_ALECA) HSP 1 Score: 94.4 bits (233), Expect = 1.930e-20 Identity = 55/158 (34.81%), Postives = 86/158 (54.43%), Query Frame = 1
Query: 52 GKIAHLLHVIASRPDMKHVCEIGFNAGHSALAMLAARDDVHVTSFELGGHSYSYHAASVLDAWFPGRLQLRIGDSTIEIPKFIKDSMEKHGEVQCDMWFIDGGHSYLQILADTMHAIDAVSTRKNQHRKWVAIFDDFGCDMSHCIGTRRAIAALSASG 525
G+ A H IA++P +K++CEIGFNAGHSA +L + + H+ SF+LG YS A + + F R + +G+ST+ +P F E+ +V+CD+ +DGGH + AD + A++ +QH + + DD C C G A A+G
Sbjct: 68 GEEADYYHRIAAQPWVKNICEIGFNAGHSAALLLTSNPNAHLYSFDLGVMRYSLPAVAFMKRHFGDRFTITVGNSTVTLPSFA----EQRPDVKCDLMIVDGGHQFYISRADIAN-FQALAN-PSQH---LLLVDDTRCTRMICEGPEMAWREAVAAG 216
BLAST of mRNA_M-pyrifera_M_contig65553.15936.1 vs. uniprot
Match: R7TD35_CAPTE (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7TD35_CAPTE) HSP 1 Score: 94.4 bits (233), Expect = 3.280e-20 Identity = 53/128 (41.41%), Postives = 74/128 (57.81%), Query Frame = 1
Query: 79 IASRPDMKHVCEIGFNAGHSALAMLAARDDVHVTSFELGGHSYSYHAASVLDAWFPGRLQLRIGDSTIEIPKFIKDSMEKHGEVQCDMWFIDGGHSYLQILADTMHAIDAVSTRKNQHRKWVAIFDDF 462
+A P +K +CE GFNAGHS L LAA++ V SF+LG H Y+ A L + +PGRL + GDST +P+F H EV+CD+ +DGGHS + I D D V+ R+ + +FDD+
Sbjct: 125 LAQLPFVKTICETGFNAGHSTLIWLAAKNGTKVYSFDLGSHKYAKKMAQHLQSMYPGRLIVTWGDSTKTLPQF----HGAHPEVKCDLIIVDGGHS-VPIATD-----DFVNFRRMASSSNIVVFDDY 242
BLAST of mRNA_M-pyrifera_M_contig65553.15936.1 vs. uniprot
Match: A0A485LBD3_9STRA (Aste57867_18702 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LBD3_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 4.520e-20 Identity = 49/130 (37.69%), Postives = 75/130 (57.69%), Query Frame = 1
Query: 13 GFAVYDGHTGHSPGKIAHLLHVIASRPDMKHVCEIGFNAGHSALAMLAARDDVHVTSFELGGHSYSYHAASVLDAWFPGRLQLRIGDSTIEIPKFIKDSMEKHGEVQCDMWFIDGGHSYLQILADTMHAI 402
G ++++GHT P L +++ ++ +IGFNAGHSA+ +L+A ++H+TSF+L H+Y AA+ +DA FPGR L GDST+ IP ++ D D F+DGGHS AD + +
Sbjct: 106 GHSMFEGHTSLFPTSERILRSLVSESTTIRRAMQIGFNAGHSAMTLLSANSEMHLTSFDLVEHAYVSKAAAFVDAAFPGRHVLIAGDSTVTIPAYVTDE-------PFDFIFVDGGHSLEVATADLANCL 228
BLAST of mRNA_M-pyrifera_M_contig65553.15936.1 vs. uniprot
Match: D7FK26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK26_ECTSI) HSP 1 Score: 92.4 bits (228), Expect = 2.160e-19 Identity = 51/127 (40.16%), Postives = 74/127 (58.27%), Query Frame = 1
Query: 25 YDGHTGHSPGKIAHLLHVIASRPD-MKHVCEIGFNAGHSALA-MLAARDDVHVTSFELGGHSYSYHAASVLDAWFPGRLQLRIGDSTIEIPKFIKDSMEKHGEVQ-CDMWFIDGGHSYLQILADTMH 396
++GHTG P K+ L V D +K +CE+GFNAGHS+L +L + + +F+LG H Y HA L A FPGRL++ IGDS++ IP ++ E Q C++ F+DG HS AD ++
Sbjct: 154 FEGHTGGFPRKVEALGAVSRDGGDRVKKICEVGFNAGHSSLNWLLHSHPSTKILAFDLGEHEYMRHALDFLQAMFPGRLEVLIGDSSVTIPAYVVAEAAAGREPQGCNILFVDGDHSEDGAYADLVN 280
BLAST of mRNA_M-pyrifera_M_contig65553.15936.1 vs. uniprot
Match: A0A7S3Y0C8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0C8_HETAK) HSP 1 Score: 92.0 bits (227), Expect = 2.440e-19 Identity = 54/128 (42.19%), Postives = 68/128 (53.12%), Query Frame = 1
Query: 28 DGHTGHSPGKIAHLLHVIASRPDMKHVCEIGFNAGHSALAMLAARDDVHVTSFELG--------GHSYSYHAASVLDAWFPGRLQLRIGDSTIEIPKFIKDSMEKHGEVQCDMWFIDGGHSYLQILAD 387
+GH+G P KI ++ M VCEIGFNAGHSALA LAA V SF+LG G +YS A + FPGR L IG+S+ +P F + S +CD+ +DG HSY Q L D
Sbjct: 21 EGHSGQYPEKIKAFQRLVQENQSMSTVCEIGFNAGHSALAFLAAGPRTQVVSFDLGTNRAFKGSGQTYSARAEDFVSGVFPGRSFLIIGNSSYTVPTFAEFSHP----FRCDLILVDGEHSYEQALDD 144
BLAST of mRNA_M-pyrifera_M_contig65553.15936.1 vs. uniprot
Match: A0A7S3Y0D5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0D5_HETAK) HSP 1 Score: 93.6 bits (231), Expect = 2.680e-19 Identity = 51/128 (39.84%), Postives = 71/128 (55.47%), Query Frame = 1
Query: 28 DGHTGHSPGKIAHLLHVIASRPDMKHVCEIGFNAGHSALAMLAARDDVHVTSFELG--------GHSYSYHAASVLDAWFPGRLQLRIGDSTIEIPKFIKDSMEKHGEVQCDMWFIDGGHSYLQILAD 387
+GH+G PGKI ++ M VCEIGFNAGHSA+A LAA + V SF+LG G +Y+ A + + FPGR L +G+++ +P F + S +CD +DGGHSY Q + D
Sbjct: 136 EGHSGQYPGKIKVFQRLVQEYRSMSTVCEIGFNAGHSAMAFLAASSRIRVVSFDLGTNRAPKGSGQTYAARAQDFVSSVFPGRSILVVGNASYTVPTFAEFSHP----FRCDFILVDGGHSYEQAVDD 259
BLAST of mRNA_M-pyrifera_M_contig65553.15936.1 vs. uniprot
Match: R7VJW1_CAPTE (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7VJW1_CAPTE) HSP 1 Score: 92.0 bits (227), Expect = 3.550e-19 Identity = 54/146 (36.99%), Postives = 83/146 (56.85%), Query Frame = 1
Query: 28 DGHTGHSPGKIAHLLHV-IASRPDMKHVCEIGFNAGHSALAMLAARDDVHVTSFELGGHSYSYHAASVLDAWFPGRLQLRIGDSTIEIPKFIKDSMEKHGEVQCDMWFIDGGHSYLQILADTMHAIDAVSTRKNQHRKWVAIFDDF 462
+GH+G + +++V +A P +K +CE GFNAGHS L L A++ V SF+LG H Y+ A L + +PGRL + GDST +P+F K H EV CD+ +DGGH ++I D +++ +N + +FDD+
Sbjct: 120 EGHSGQVMEQ--QMVYVKLAQLPFVKTICETGFNAGHSTLIWLTAKNGTKVYSFDLGNHGYAKTMAQHLQSQYPGRLTVTWGDSTKTLPEFRKS----HPEVTCDLIIVDGGH-LVRIATDDHSNFRRMASLEN-----IVVFDDY 253
BLAST of mRNA_M-pyrifera_M_contig65553.15936.1 vs. uniprot
Match: A0A7S4DA05_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DA05_HETAK) HSP 1 Score: 90.9 bits (224), Expect = 6.120e-19 Identity = 51/128 (39.84%), Postives = 69/128 (53.91%), Query Frame = 1
Query: 28 DGHTGHSPGKIAHLLHVIASRPDMKHVCEIGFNAGHSALAMLAARDDVHVTSFELG--------GHSYSYHAASVLDAWFPGRLQLRIGDSTIEIPKFIKDSMEKHGEVQCDMWFIDGGHSYLQILAD 387
+GH+G P KI ++ M VCEIGFNAGHSALA LAA V SF+LG G +Y+ A + + FPGR L +G+++ +P F + S +CD +DGGHSY Q + D
Sbjct: 21 EGHSGQYPEKIKAFQRLVQENQSMSTVCEIGFNAGHSALAFLAAGPRTQVVSFDLGTNRAPKGSGQTYAARAQDFVSSVFPGRSILVVGNASYTVPTFAEFSHP----FRCDFILVDGGHSYEQAVDD 144 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65553.15936.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig65553.15936.1 >prot_M-pyrifera_M_contig65553.15936.1 ID=prot_M-pyrifera_M_contig65553.15936.1|Name=mRNA_M-pyrifera_M_contig65553.15936.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=179bp MLGSGFAVYDGHTGHSPGKIAHLLHVIASRPDMKHVCEIGFNAGHSALAMback to top mRNA from alignment at M-pyrifera_M_contig65553:494..1030- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig65553.15936.1 ID=mRNA_M-pyrifera_M_contig65553.15936.1|Name=mRNA_M-pyrifera_M_contig65553.15936.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=537bp|location=Sequence derived from alignment at M-pyrifera_M_contig65553:494..1030- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig65553:494..1030- >mRNA_M-pyrifera_M_contig65553.15936.1 ID=mRNA_M-pyrifera_M_contig65553.15936.1|Name=mRNA_M-pyrifera_M_contig65553.15936.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1074bp|location=Sequence derived from alignment at M-pyrifera_M_contig65553:494..1030- (Macrocystis pyrifera P11B4 male)back to top |