mRNA_M-pyrifera_M_contig13843.6083.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13843.6083.1 vs. uniprot
Match: D7G359_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G359_ECTSI) HSP 1 Score: 132 bits (333), Expect = 5.570e-34 Identity = 61/80 (76.25%), Postives = 71/80 (88.75%), Query Frame = 1
Query: 25 LAQDGCCLAFSVGFPLLGNRHRKHVYRSFSLAAQILESIESPLAKLRAQLHLEVARCEMDSDFLAKTSSHMGKAIRQDYG 264
L Q+GCCLAFS G PLLG+RHRKHV+R FSLAAQIL+ ++SPLA+LRAQLHLEVA+CEMDSDFLAK +SH+ KA QDYG
Sbjct: 631 LLQEGCCLAFSTGVPLLGSRHRKHVHRCFSLAAQILQDLQSPLARLRAQLHLEVAKCEMDSDFLAKAASHVEKACMQDYG 710
BLAST of mRNA_M-pyrifera_M_contig13843.6083.1 vs. uniprot
Match: A0A485KQ62_9STRA (Aste57867_10079 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQ62_9STRA) HSP 1 Score: 100 bits (248), Expect = 1.660e-22 Identity = 46/82 (56.10%), Postives = 60/82 (73.17%), Query Frame = 1
Query: 22 SLAQDGCCLAFSVGFPLLGNRHRKHVYRSFSLAAQILESIESPLAKLRAQLHLEVARCEMDSDFLAKTSSHMGKAIRQDYGG 267
+L QD C LA++V PLL + RKHV+R F A +LE +ESPL LRAQ+H E A+CEM+SD+LAK S+H+ KA+ DYGG
Sbjct: 474 NLIQDICILAWNVAMPLLESHLRKHVHRLFQSATALLEDLESPLVALRAQMHFETAKCEMESDYLAKASTHVNKALALDYGG 555
BLAST of mRNA_M-pyrifera_M_contig13843.6083.1 vs. uniprot
Match: A0A3L6V9I7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V9I7_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.450e-21 Identity = 45/87 (51.72%), Postives = 59/87 (67.82%), Query Frame = 1
Query: 25 LAQDGCCLAFSVGFPLLGNRHRKHVYRSFSLAAQILESIESPLAKLRAQLHLEVARCEMDSDFLAKTSSHMGKAIRQDYGGEPIPPP 285
L QD C A++V PL+ + RKHV+R F A +LE +ESPL LRAQ+H E A+CEM+ D+LAK S H+ KA++ DYGG P P
Sbjct: 488 LIQDICLFAWNVALPLVESHLRKHVHRLFQSATALLEELESPLVALRAQMHFEAAKCEMECDYLAKASVHVNKALQLDYGGTPTEQP 574
BLAST of mRNA_M-pyrifera_M_contig13843.6083.1 vs. uniprot
Match: A0A024UJC2_9STRA (FHA domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UJC2_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 2.000e-21 Identity = 44/81 (54.32%), Postives = 58/81 (71.60%), Query Frame = 1
Query: 25 LAQDGCCLAFSVGFPLLGNRHRKHVYRSFSLAAQILESIESPLAKLRAQLHLEVARCEMDSDFLAKTSSHMGKAIRQDYGG 267
L QD C A++V PL+ + RKHV+R F A +LE +ESPL LRAQ+HLE A+CEMD D+LAK + H+ KA++ DYGG
Sbjct: 474 LIQDICLFAWNVALPLVESHLRKHVHRLFQSATSLLEELESPLVALRAQMHLETAKCEMDCDYLAKAAIHVNKALQLDYGG 554
BLAST of mRNA_M-pyrifera_M_contig13843.6083.1 vs. uniprot
Match: W4H7H1_9STRA (FHA domain-containing protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H7H1_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 2.730e-21 Identity = 45/87 (51.72%), Postives = 59/87 (67.82%), Query Frame = 1
Query: 25 LAQDGCCLAFSVGFPLLGNRHRKHVYRSFSLAAQILESIESPLAKLRAQLHLEVARCEMDSDFLAKTSSHMGKAIRQDYGGEPIPPP 285
L QD C A++V PL+ + RKHV+R F A +LE +ESPL LRAQ+H E A+CEM+ D+LAK S H+ KA++ DYGG P P
Sbjct: 493 LIQDICLFAWNVALPLVESHLRKHVHRLFQSATTLLEELESPLVALRAQMHFESAKCEMECDYLAKASVHVNKALQLDYGGTPTEQP 579
BLAST of mRNA_M-pyrifera_M_contig13843.6083.1 vs. uniprot
Match: A0A1W0A8K3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8K3_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 9.430e-21 Identity = 46/88 (52.27%), Postives = 59/88 (67.05%), Query Frame = 1
Query: 22 SLAQDGCCLAFSVGFPLLGNRHRKHVYRSFSLAAQILESIESPLAKLRAQLHLEVARCEMDSDFLAKTSSHMGKAIRQDYGGEPIPPP 285
+L QD C A++V PLL RKHV+R F A +LE ++SPL +LRAQ+HLE A+CEM SD+LAK S H+ KA+ DYG PP
Sbjct: 52 NLMQDICIFAWNVALPLLEPHLRKHVHRLFQAATALLEELDSPLVQLRAQMHLETAKCEMMSDYLAKASVHVNKALVLDYGESATTPP 139
BLAST of mRNA_M-pyrifera_M_contig13843.6083.1 vs. uniprot
Match: A0A1V9YIG9_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YIG9_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 5.410e-19 Identity = 43/80 (53.75%), Postives = 53/80 (66.25%), Query Frame = 1
Query: 25 LAQDGCCLAFSVGFPLLGNRHRKHVYRSFSLAAQILESIESPLAKLRAQLHLEVARCEMDSDFLAKTSSHMGKAIRQDYG 264
L QD C A++V PLL RKHV+R F A +LE ++SPL LRAQ+HLE A+CEM D+LAK H+ KAI DYG
Sbjct: 426 LMQDICIYAWNVALPLLEPHLRKHVHRLFQTATSLLEELDSPLVMLRAQMHLETAKCEMKCDYLAKACVHVNKAIMLDYG 505
BLAST of mRNA_M-pyrifera_M_contig13843.6083.1 vs. uniprot
Match: T0RW37_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0RW37_SAPDV) HSP 1 Score: 89.7 bits (221), Expect = 7.380e-19 Identity = 42/80 (52.50%), Postives = 54/80 (67.50%), Query Frame = 1
Query: 25 LAQDGCCLAFSVGFPLLGNRHRKHVYRSFSLAAQILESIESPLAKLRAQLHLEVARCEMDSDFLAKTSSHMGKAIRQDYG 264
L QD C A++V PLL RKHV+R F+ +LE ++SPL LRAQ+HLE A+CEM D+LAK S H+ KA+ DYG
Sbjct: 426 LMQDICIYAWNVALPLLEPHLRKHVHRLFTATTSLLEELDSPLVTLRAQMHLETAKCEMKCDYLAKASVHVNKALLLDYG 505
BLAST of mRNA_M-pyrifera_M_contig13843.6083.1 vs. uniprot
Match: A0A7S1XYU5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYU5_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 5.970e-14 Identity = 35/80 (43.75%), Postives = 53/80 (66.25%), Query Frame = 1
Query: 25 LAQDGCCLAFSVGFPLLGNRHRKHVYRSFSLAAQILESIESPLAKLRAQLHLEVARCEMDSDFLAKTSSHMGKAIRQDYG 264
L G L +++ LL R+H + +L A+IL+ +ESPL +LR Q+HLEVARCE+ +DF+A ++H+ KA+ DYG
Sbjct: 98 LLHIGAVLIWNMAIGLLRPHLRRHCHAGLTLVAEILDMLESPLLRLRMQVHLEVARCELAADFVANANTHIQKAMALDYG 177
BLAST of mRNA_M-pyrifera_M_contig13843.6083.1 vs. uniprot
Match: A0A0D2JE12_9CHLO (Flagellar associated protein (Fragment) n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2JE12_9CHLO) HSP 1 Score: 71.6 bits (174), Expect = 1.640e-12 Identity = 34/72 (47.22%), Postives = 48/72 (66.67%), Query Frame = 1
Query: 46 LAFSVGFPLLGNRHRKHVYRSFSLAAQILESIESPLAKLRAQLHLEVARCEMDSDFLAKTSSHMGKAIRQDY 261
LA++ G PLL R+ V R F+ AA+ LE++ SPL +LRAQLHLE+ +CE D D L K + + +A+ DY
Sbjct: 371 LAWNAGLPLLQPNTRRRVKRCFASAARALEAVASPLGRLRAQLHLELGKCEADDDALVKAAKEVHQALALDY 442 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13843.6083.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13843.6083.1 >prot_M-pyrifera_M_contig13843.6083.1 ID=prot_M-pyrifera_M_contig13843.6083.1|Name=mRNA_M-pyrifera_M_contig13843.6083.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=95bp MCNTFVLSLAQDGCCLAFSVGFPLLGNRHRKHVYRSFSLAAQILESIESPback to top mRNA from alignment at M-pyrifera_M_contig13843:1399..2040+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13843.6083.1 ID=mRNA_M-pyrifera_M_contig13843.6083.1|Name=mRNA_M-pyrifera_M_contig13843.6083.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=642bp|location=Sequence derived from alignment at M-pyrifera_M_contig13843:1399..2040+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13843:1399..2040+ >mRNA_M-pyrifera_M_contig13843.6083.1 ID=mRNA_M-pyrifera_M_contig13843.6083.1|Name=mRNA_M-pyrifera_M_contig13843.6083.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=570bp|location=Sequence derived from alignment at M-pyrifera_M_contig13843:1399..2040+ (Macrocystis pyrifera P11B4 male)back to top |