mRNA_M-pyrifera_M_contig13765.6065.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13765.6065.1 vs. uniprot
Match: A0A6H5KTI6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTI6_9PHAE) HSP 1 Score: 151 bits (382), Expect = 1.560e-42 Identity = 74/104 (71.15%), Postives = 87/104 (83.65%), Query Frame = 1
Query: 1 LAVGDGLADLVGRQIGRHKWQEGGSKSVEGSVAFASSSFMASMAMIAWFHRFGVLAVSPAEAAGRVAAVSAACAAVELLPPRLAGDDNLSVPVAALALGRWLFR 312
+AVGDG+ADLVGRQ+G+HKW++GG KSVEGS AF S SF+AS+AMI WF FG+L+V+P EAA R AA+S A AAVEL PPRL GDDN+SVPV AL LGR LFR
Sbjct: 266 MAVGDGMADLVGRQLGKHKWRKGGEKSVEGSAAFVSGSFLASVAMIQWFRHFGLLSVTPTEAAARAAAISFASAAVELFPPRLVGDDNISVPVTALVLGRLLFR 369
BLAST of mRNA_M-pyrifera_M_contig13765.6065.1 vs. uniprot
Match: A0A7S0XGC8_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0XGC8_9CHLO) HSP 1 Score: 84.0 bits (206), Expect = 2.570e-18 Identity = 51/105 (48.57%), Postives = 67/105 (63.81%), Query Frame = 1
Query: 1 LAVGDGLADLVGRQIGR-HKWQEGGSKSVEGSVAFASSSFMASMAMIAWFHRFGVLAVSPAEAAGRVAAVSAACAAVELLPPRLAGDDNLSVPVAALALGRWLFR 312
L GDGL+D+VGR++G +K +KSV GS A +F SM + + FH G L +S + AA R+A+V+AAC VE LP DDN+ VPVAAL LGR LF+
Sbjct: 54 LCGGDGLSDIVGRRLGAGNKLWFNKNKSVAGSAAMFLGAFGFSMGLTSAFHSLGYLQLSASSAAVRLASVAAACTVVEALPITARVDDNILVPVAALLLGRMLFK 158
BLAST of mRNA_M-pyrifera_M_contig13765.6065.1 vs. uniprot
Match: C1MRG0_MICPC (Predicted protein (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MRG0_MICPC) HSP 1 Score: 85.5 bits (210), Expect = 4.160e-18 Identity = 48/101 (47.52%), Postives = 64/101 (63.37%), Query Frame = 1
Query: 10 GDGLADLVGRQIGR-HKWQEGGSKSVEGSVAFASSSFMASMAMIAWFHRFGVLAVSPAEAAGRVAAVSAACAAVELLPPRLAGDDNLSVPVAALALGRWLF 309
GDGLAD+VGR++G+ + KS GS A F S+A+ A+FH G ++V P AAGR+A ++AAC A+E LP DDN+SVPV A+ LG LF
Sbjct: 148 GDGLADIVGRRLGKGNPLPFNADKSYAGSAAMFLGGFGLSLALCAFFHALGYMSVDPGSAAGRLALIAAACTAIEALPAGSFLDDNISVPVVAVVLGGVLF 248
BLAST of mRNA_M-pyrifera_M_contig13765.6065.1 vs. uniprot
Match: A0A7R9UWT7_DIALT (Hypothetical protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UWT7_DIALT) HSP 1 Score: 80.9 bits (198), Expect = 2.400e-17 Identity = 47/99 (47.47%), Postives = 66/99 (66.67%), Query Frame = 1
Query: 1 LAVGDGLADLVGRQIG-RHKWQEGGSKSVEGSVAFASSSFMASMAMIAWFHRFGVLAVSPAEAAGRVAAVSAACAAVELLPPRLAGDDNLSVPVAALAL 294
+AVGDG+AD+VGR++G ++W SKSV GSVAF + + AS+ ++AW +GVLA + R+ +S ACAAVELLP + DDN+SVP+ L
Sbjct: 31 MAVGDGVADIVGRRLGGSNRWPFNPSKSVAGSVAFVAGATGASIGLLAWLGAWGVLAPLAPDTPLRLLLISVACAAVELLPTDVL-DDNVSVPLVGAGL 128
BLAST of mRNA_M-pyrifera_M_contig13765.6065.1 vs. uniprot
Match: A0A7S0Q8J0_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q8J0_9EUKA) HSP 1 Score: 79.0 bits (193), Expect = 8.180e-17 Identity = 46/104 (44.23%), Postives = 61/104 (58.65%), Query Frame = 1
Query: 1 LAVGDGLADLVGRQIGRHKWQEGGSKSVEGSVAFASSSFMASMAMIAWFHRFGVLAVSPAEAAGRVAAVSAACAAVELLPPRLAGDDNLSVPVAALALGRWLFR 312
+AVGDGLAD+ GRQ G KW +KS GS AFA S+F+AS+ +A FH G A++ A + +A +S AA EL+P DDN+ VP+ A L L
Sbjct: 15 MAVGDGLADIFGRQYGTSKWPFAPTKSYVGSFAFALSAFLASLGFVALFHACGYTALTAAASVPALALISLLSAAAELMP---GVDDNIVVPLTATGLAALLLH 115
BLAST of mRNA_M-pyrifera_M_contig13765.6065.1 vs. uniprot
Match: A0A8J6C688_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C688_DIALT) HSP 1 Score: 80.9 bits (198), Expect = 5.180e-16 Identity = 47/99 (47.47%), Postives = 66/99 (66.67%), Query Frame = 1
Query: 1 LAVGDGLADLVGRQIG-RHKWQEGGSKSVEGSVAFASSSFMASMAMIAWFHRFGVLAVSPAEAAGRVAAVSAACAAVELLPPRLAGDDNLSVPVAALAL 294
+AVGDG+AD+VGR++G ++W SKSV GSVAF + + AS+ ++AW +GVLA + R+ +S ACAAVELLP + DDN+SVP+ L
Sbjct: 202 MAVGDGVADIVGRRLGGSNRWPFNPSKSVAGSVAFVAGATGASIGLLAWLGAWGVLAPLAPDTPLRLLLISVACAAVELLPTDVL-DDNVSVPLVGAGL 299
BLAST of mRNA_M-pyrifera_M_contig13765.6065.1 vs. uniprot
Match: A0A835HDS4_9MAGN (Uncharacterized protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835HDS4_9MAGN) HSP 1 Score: 72.8 bits (177), Expect = 5.920e-13 Identity = 44/103 (42.72%), Postives = 66/103 (64.08%), Query Frame = 1
Query: 1 LAVGDGLADLVGRQIGRHKWQEGGSKSVEGSVAFASSSFMASMAMIAWFHRFGVLAVSPAEAAGRVAAVSAACAAVELLPPRLAGDDNLSVPVAALALGRWLF 309
L GDG+AD+VGR++GR+K +KS+EGS+A A++ F+AS+ + +F FG++ S G + VS A A VE LP DDNL+VP+ +L +G +F
Sbjct: 228 LCAGDGVADIVGRRLGRNKLPYNRNKSLEGSIAMATAGFIASVGYMHYFSLFGLVHESWEMLFGFLI-VSLASAVVESLPISTDLDDNLTVPLTSLLVGSLIF 329
BLAST of mRNA_M-pyrifera_M_contig13765.6065.1 vs. uniprot
Match: UPI000C1D27E9 (probable phytol kinase 3, chloroplastic isoform X1 n=4 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D27E9) HSP 1 Score: 72.4 bits (176), Expect = 7.290e-13 Identity = 41/103 (39.81%), Postives = 63/103 (61.17%), Query Frame = 1
Query: 1 LAVGDGLADLVGRQIGRHKWQEGGSKSVEGSVAFASSSFMASMAMIAWFHRFGVLAVSPAEAAGRVAAVSAACAAVELLPPRLAGDDNLSVPVAALALGRWLF 309
L GDG+AD+VGR+ G HK +KS+ GS+A A++ F+A + + +F FG + SP G + VS A + VE P DDNL+VP+A++ +G ++F
Sbjct: 211 LCAGDGIADIVGRRFGSHKLPYNRNKSIVGSIAMATAGFLACIGYMHYFSSFGYVQESPKMVLGFLV-VSLAASLVESHPLSTELDDNLTVPLASVLVGSFVF 312
BLAST of mRNA_M-pyrifera_M_contig13765.6065.1 vs. uniprot
Match: A0A5P1FFD9_ASPOF (Uncharacterized protein n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FFD9_ASPOF) HSP 1 Score: 72.0 bits (175), Expect = 8.890e-13 Identity = 44/103 (42.72%), Postives = 64/103 (62.14%), Query Frame = 1
Query: 1 LAVGDGLADLVGRQIGRHKWQEGGSKSVEGSVAFASSSFMASMAMIAWFHRFGVLAVSPAEAAGRVAAVSAACAAVELLPPRLAGDDNLSVPVAALALGRWLF 309
L GDGLAD+VGR++G++ KS+EGSVA A++ F+AS+ + +F FG + S + R VS A A VE LP DDNL+VP+ +L +G ++F
Sbjct: 195 LCAGDGLADIVGRRLGKNMLPYNIDKSIEGSVAMATAGFIASILYMHYFSTFGYIEESWGMSI-RFLLVSIAAAFVESLPISSELDDNLTVPLTSLLVGAFIF 296
BLAST of mRNA_M-pyrifera_M_contig13765.6065.1 vs. uniprot
Match: UPI0010A432DB (probable phytol kinase 3, chloroplastic n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A432DB) HSP 1 Score: 71.2 bits (173), Expect = 1.870e-12 Identity = 43/103 (41.75%), Postives = 61/103 (59.22%), Query Frame = 1
Query: 1 LAVGDGLADLVGRQIGRHKWQEGGSKSVEGSVAFASSSFMASMAMIAWFHRFGVLAVSPAEAAGRVAAVSAACAAVELLPPRLAGDDNLSVPVAALALGRWLF 309
L GDG+AD+VGR+ G K G+KS+ GS+A ASS F+AS+ + +F FG + S G + VS A VE LP DDNL+VP+ ++ +G +F
Sbjct: 207 LCAGDGMADIVGRRFGSKKIPYNGNKSLAGSIAMASSGFLASIGYMYYFSSFGYIEQSWRMILGFLI-VSIATTVVESLPISSEIDDNLTVPLTSILVGSMIF 308 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13765.6065.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13765.6065.1 >prot_M-pyrifera_M_contig13765.6065.1 ID=prot_M-pyrifera_M_contig13765.6065.1|Name=mRNA_M-pyrifera_M_contig13765.6065.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=105bp LAVGDGLADLVGRQIGRHKWQEGGSKSVEGSVAFASSSFMASMAMIAWFHback to top mRNA from alignment at M-pyrifera_M_contig13765:344..658+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13765.6065.1 ID=mRNA_M-pyrifera_M_contig13765.6065.1|Name=mRNA_M-pyrifera_M_contig13765.6065.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=315bp|location=Sequence derived from alignment at M-pyrifera_M_contig13765:344..658+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13765:344..658+ >mRNA_M-pyrifera_M_contig13765.6065.1 ID=mRNA_M-pyrifera_M_contig13765.6065.1|Name=mRNA_M-pyrifera_M_contig13765.6065.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=630bp|location=Sequence derived from alignment at M-pyrifera_M_contig13765:344..658+ (Macrocystis pyrifera P11B4 male)back to top |