mRNA_M-pyrifera_M_contig13762.6064.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13762.6064.1 vs. uniprot
Match: D8LRP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRP6_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 1.080e-20 Identity = 37/52 (71.15%), Postives = 47/52 (90.38%), Query Frame = 1
Query: 1 ELFPAWRWSEKTDAVEEAKLTHGLSPDLPDFYNIMLERPKEDSRGYGLLYVD 156
+L+P+WRW+EK A+EEAKL HGL PDLPDFYN M+ERPKED+RG+GLL+V+
Sbjct: 975 DLYPSWRWNEKLSAIEEAKLKHGLKPDLPDFYNFMMERPKEDARGFGLLHVE 1026
BLAST of mRNA_M-pyrifera_M_contig13762.6064.1 vs. uniprot
Match: A0A6H5JGP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP4_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 3.750e-20 Identity = 36/52 (69.23%), Postives = 47/52 (90.38%), Query Frame = 1
Query: 1 ELFPAWRWSEKTDAVEEAKLTHGLSPDLPDFYNIMLERPKEDSRGYGLLYVD 156
+L+P+WRW+EK A+EEAKL HGL PDLPDFYN ++ERPKED+RG+GLL+V+
Sbjct: 942 DLYPSWRWNEKLSAIEEAKLKHGLKPDLPDFYNFIMERPKEDARGFGLLHVE 993
BLAST of mRNA_M-pyrifera_M_contig13762.6064.1 vs. uniprot
Match: B8C2Z7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2Z7_THAPS) HSP 1 Score: 81.3 bits (199), Expect = 1.240e-16 Identity = 34/54 (62.96%), Postives = 43/54 (79.63%), Query Frame = 1
Query: 1 ELFPAWRWSEKTDAVEEAKLTHGLSPDLPDFYNIMLERPKEDSRGYGLLYVDVS 162
E++PAWRW EK DA+E + GL P+LPDFYN+ +ERPK+D RGYGLL+VD S
Sbjct: 924 EVYPAWRWCEKLDAIELTQKQLGLRPNLPDFYNMAMERPKKDPRGYGLLFVDAS 977
BLAST of mRNA_M-pyrifera_M_contig13762.6064.1 vs. uniprot
Match: A0A4D9CUJ3_9STRA (SET domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUJ3_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 4.310e-16 Identity = 34/54 (62.96%), Postives = 41/54 (75.93%), Query Frame = 1
Query: 1 ELFPAWRWSEKTDAVEEAKLTHGLSPDLPDFYNIMLERPKEDSRGYGLLYVDVS 162
EL+PAWRW EK DA+E+A L P LPDFYNI+LERP+ D+ GYGL +VD S
Sbjct: 787 ELYPAWRWCEKQDAIEDALQALNLKPALPDFYNILLERPRGDANGYGLAFVDAS 840
BLAST of mRNA_M-pyrifera_M_contig13762.6064.1 vs. uniprot
Match: A0A836CJD9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJD9_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 4.320e-16 Identity = 32/52 (61.54%), Postives = 42/52 (80.77%), Query Frame = 1
Query: 1 ELFPAWRWSEKTDAVEEAKLTHGLSPDLPDFYNIMLERPKEDSRGYGLLYVD 156
EL+PAWRW E+ +AVE+A+ H L P LPDFYNI+LERP+ D+RGY L+V+
Sbjct: 539 ELYPAWRWCERMEAVEDARRRHNLRPTLPDFYNIVLERPRRDARGYAALFVE 590
BLAST of mRNA_M-pyrifera_M_contig13762.6064.1 vs. uniprot
Match: A0A7S3GXA6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GXA6_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 5.600e-16 Identity = 33/54 (61.11%), Postives = 42/54 (77.78%), Query Frame = 1
Query: 1 ELFPAWRWSEKTDAVEEAKLTHGLSPDLPDFYNIMLERPKEDSRGYGLLYVDVS 162
EL+P +RW E+ D VE+A+ T L P LPDF+NI+LERP++D GYGLLYVD S
Sbjct: 22 ELYPPYRWCERLDVVEQAQETFELKPTLPDFWNILLERPRQDPNGYGLLYVDAS 75
BLAST of mRNA_M-pyrifera_M_contig13762.6064.1 vs. uniprot
Match: A0A7S4DIC4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIC4_HETAK) HSP 1 Score: 78.6 bits (192), Expect = 5.770e-16 Identity = 32/54 (59.26%), Postives = 43/54 (79.63%), Query Frame = 1
Query: 1 ELFPAWRWSEKTDAVEEAKLTHGLSPDLPDFYNIMLERPKEDSRGYGLLYVDVS 162
EL+P+WRW E+ DA+ EA+ G+ LPDFYNI+LERP+ D+RGYGLLYV+ +
Sbjct: 43 ELYPSWRWCERQDAIAEAEKALGVGGGLPDFYNILLERPRADARGYGLLYVEAN 96
BLAST of mRNA_M-pyrifera_M_contig13762.6064.1 vs. uniprot
Match: A0A7S4KCG3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KCG3_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 5.900e-16 Identity = 32/54 (59.26%), Postives = 42/54 (77.78%), Query Frame = 1
Query: 1 ELFPAWRWSEKTDAVEEAKLTHGLSPDLPDFYNIMLERPKEDSRGYGLLYVDVS 162
E++P WRW EK DA+E+ + GL P+LPDFYN+ LERP+ D RG+GLL+VD S
Sbjct: 330 EVYPPWRWGEKLDAIEQTQKRLGLRPNLPDFYNMSLERPRRDPRGFGLLFVDAS 383
BLAST of mRNA_M-pyrifera_M_contig13762.6064.1 vs. uniprot
Match: A0A7S2KB67_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KB67_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 1.500e-15 Identity = 33/54 (61.11%), Postives = 41/54 (75.93%), Query Frame = 1
Query: 1 ELFPAWRWSEKTDAVEEAKLTHGLSPDLPDFYNIMLERPKEDSRGYGLLYVDVS 162
E+FPAWRW EK DA+E + GL P+LPDFYN+ +ERP +D RGY LL+VD S
Sbjct: 134 EVFPAWRWCEKLDAIEYVQKELGLRPNLPDFYNMAMERPMKDPRGYSLLFVDAS 187
BLAST of mRNA_M-pyrifera_M_contig13762.6064.1 vs. uniprot
Match: A0A7S1B894_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B894_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 2.800e-15 Identity = 32/54 (59.26%), Postives = 41/54 (75.93%), Query Frame = 1
Query: 1 ELFPAWRWSEKTDAVEEAKLTHGLSPDLPDFYNIMLERPKEDSRGYGLLYVDVS 162
E++PAWRW EK DA+E+ + GL P L DFYN+ LERP +D RGYG+L+VD S
Sbjct: 654 EIYPAWRWVEKLDAIEQTQKMVGLKPALADFYNMTLERPMDDPRGYGILFVDAS 707 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13762.6064.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13762.6064.1 >prot_M-pyrifera_M_contig13762.6064.1 ID=prot_M-pyrifera_M_contig13762.6064.1|Name=mRNA_M-pyrifera_M_contig13762.6064.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=54bp ELFPAWRWSEKTDAVEEAKLTHGLSPDLPDFYNIMLERPKEDSRGYGLLYback to top mRNA from alignment at M-pyrifera_M_contig13762:2736..2897- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13762.6064.1 ID=mRNA_M-pyrifera_M_contig13762.6064.1|Name=mRNA_M-pyrifera_M_contig13762.6064.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=162bp|location=Sequence derived from alignment at M-pyrifera_M_contig13762:2736..2897- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13762:2736..2897- >mRNA_M-pyrifera_M_contig13762.6064.1 ID=mRNA_M-pyrifera_M_contig13762.6064.1|Name=mRNA_M-pyrifera_M_contig13762.6064.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=324bp|location=Sequence derived from alignment at M-pyrifera_M_contig13762:2736..2897- (Macrocystis pyrifera P11B4 male)back to top |