mRNA_M-pyrifera_M_contig13551.5996.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig13551.5996.1
Unique NamemRNA_M-pyrifera_M_contig13551.5996.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig13551.5996.1 vs. uniprot
Match: A0A6H5LAR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAR2_9PHAE)

HSP 1 Score: 329 bits (844), Expect = 1.640e-108
Identity = 153/224 (68.30%), Postives = 181/224 (80.80%), Query Frame = 1
Query:    1 QALNPEVDWHSVEEAYLGNAPVELTYVDNFFSPKALAVLLDMARGSTFFFENKPNYLGAYPSDGMSHPLLYQIAEEAAERLPSRIVGRGTPGWPLVQSWIYIYGGNDGERCSRGIKVHADNAMVNMNVWLAPDSANLGSAETDDGGGLTVFHAKSPDNWTFRDFNENPSSVRDFLEHNDAGNTSTPHRQNRALLFDSSLFHQSDPFRFKKGFENKRINLTLLFG 672
            +ALNP VDW++VEEAYL N  V++ ++D FFS KALA LLD+A GS+ F + + NYLGAYP +GMSHPLLYQIAEEAA RLP RI+GR TPGWPL Q+W YIYGGNDGERC RGI+VHAD A +N+N+WL  DSANLGS ETDDGGGLTVFHAK P +W F++FN++P +++ FLE NDAGNTS P+RQNRAL+FDS LFHQSDPFRFKKG       L   FG
Sbjct:  247 EALNPNVDWNAVEEAYLVNGAVKIVHIDGFFSQKALAALLDIAHGSSIFVDVRENYLGAYPGEGMSHPLLYQIAEEAAVRLP-RILGRDTPGWPLAQTWFYIYGGNDGERCMRGIRVHADTAEINLNIWLTDDSANLGSVETDDGGGLTVFHAKPPGDWGFQEFNQDPDAIQAFLEANDAGNTSVPYRQNRALMFDSMLFHQSDPFRFKKGILRLATKLLTCFG 469          
BLAST of mRNA_M-pyrifera_M_contig13551.5996.1 vs. uniprot
Match: D7G5E2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E2_ECTSI)

HSP 1 Score: 333 bits (854), Expect = 2.440e-103
Identity = 154/224 (68.75%), Postives = 181/224 (80.80%), Query Frame = 1
Query:    1 QALNPEVDWHSVEEAYLGNAPVELTYVDNFFSPKALAVLLDMARGSTFFFENKPNYLGAYPSDGMSHPLLYQIAEEAAERLPSRIVGRGTPGWPLVQSWIYIYGGNDGERCSRGIKVHADNAMVNMNVWLAPDSANLGSAETDDGGGLTVFHAKSPDNWTFRDFNENPSSVRDFLEHNDAGNTSTPHRQNRALLFDSSLFHQSDPFRFKKGFENKRINLTLLFG 672
            +ALNP VDW++VEEAYLGN PVE+ ++D FFS KALA LLD+A GS+ F + + NYLGAY  +GMSHPLLYQIAEE A RLP RI+GR TPGWPL Q+W YIYGGNDGERC+RGI+VHAD A +N+N+WL  DSANLGS ETDDGGGLTVFHAK P +W F++FN+ P +++ FLE NDAGNTS P+RQNRAL+FDS LFHQSDPFRFKKG       L   FG
Sbjct:  988 EALNPNVDWNAVEEAYLGNGPVEIVHIDGFFSQKALAALLDIAHGSSIFVDVRENYLGAYLGEGMSHPLLYQIAEEVAVRLP-RILGRDTPGWPLAQTWFYIYGGNDGERCTRGIRVHADTAEINLNIWLTDDSANLGSVETDDGGGLTVFHAKPPGDWGFQEFNQEPDAIQAFLEENDAGNTSVPYRQNRALMFDSMLFHQSDPFRFKKGIFRLAARLLTYFG 1210          
BLAST of mRNA_M-pyrifera_M_contig13551.5996.1 vs. uniprot
Match: UPI00164B9922 (hypothetical protein n=1 Tax=Undibacterium hunanense TaxID=2762292 RepID=UPI00164B9922)

HSP 1 Score: 183 bits (464), Expect = 3.000e-52
Identity = 104/225 (46.22%), Postives = 134/225 (59.56%), Query Frame = 1
Query:    4 ALNPEVDWHSVEEAYLGNAPVELTYVDNFFSPKALAVLLDMARGSTFFFENK--PNYLGAYPSDGMSHPLLYQIAEEAAERLPSRIVGRGTPGWPLVQSWIYIYGGNDGERCSRGIKVHADNAMVNMNVWLAPDSANLGSAETDDGGGLTVFHAKSPDNWTFRDFNENPSSVRDFLEHNDAGNTSTPHRQNRALLFDSSLFHQSDPFRFKKGFENKRINLTLLFG 672
            ALN ++DW +VE+AY  NAP  +TY+DNF  P+AL  L      ST +F+ +    Y+G    DG   PLL QIAEE    +P RI G       +   W Y Y   D ER   GI +HAD A +N+N WLAPD ANL      D GGL ++  ++P NW F D+N N   +  FL+   A     PHRQNRA LF+S LFH++D FRFK G+EN+RIN+T+LFG
Sbjct:  211 ALNSDIDWAAVEDAYFANAP-GMTYIDNFLKPEALTSLRRFCLESTLWFDYQYFGEYVGCTIEDGFVCPLLLQIAEEQKAAMP-RIFGDHR----IHGMWGYKY---DSERT--GISIHADFAAINVNFWLAPDDANL----DPDSGGLVIWDKEAPLNWEFDDYNNNTEKITAFLQETGAKTFVVPHRQNRAALFNSDLFHKTDNFRFKPGYENRRINVTMLFG 420          
BLAST of mRNA_M-pyrifera_M_contig13551.5996.1 vs. uniprot
Match: UPI0019A93A48 (Uncharacterized protein n=1 Tax=Undibacterium terreum TaxID=1224302 RepID=UPI0019A93A48)

HSP 1 Score: 176 bits (445), Expect = 1.090e-49
Identity = 101/225 (44.89%), Postives = 134/225 (59.56%), Query Frame = 1
Query:    4 ALNPEVDWHSVEEAYLGNAPVELTYVDNFFSPKALAVLLDMARGSTFFFENK--PNYLGAYPSDGMSHPLLYQIAEEAAERLPSRIVGRGTPGWPLVQSWIYIYGGNDGERCSRGIKVHADNAMVNMNVWLAPDSANLGSAETDDGGGLTVFHAKSPDNWTFRDFNENPSSVRDFLEHNDAGNTSTPHRQNRALLFDSSLFHQSDPFRFKKGFENKRINLTLLFG 672
            ALN + DW ++E AY  NAP  +TY+DNF  P+ALA L      ST +F+ +    Y+G    DG   PLL QIAEE    LPS I G       +   W Y Y   D E    GI VHAD A +N+N WLAPD ANL      +GGGL ++  ++P +W F D+N N   + +FL  + A     PHRQNR +LF+S LFH++D F+FK G+EN+RIN+T+L+G
Sbjct:  185 ALNQDQDWAAIESAYFANAP-GMTYIDNFLKPEALASLRRFCLESTIWFDGRYGDGYVGCTCEDGFICPLLAQIAEEQRLALPS-IFGEHR----ISGLWGYKY---DSELT--GISVHADYAAINVNFWLAPDDANL----DPNGGGLVIWDKEAPLDWNFDDYNNNLPLIAEFLRTSGAKEFVVPHRQNRVVLFNSDLFHKTDSFKFKPGYENRRINVTMLYG 394          
BLAST of mRNA_M-pyrifera_M_contig13551.5996.1 vs. uniprot
Match: UPI0016673694 (tetratricopeptide repeat protein n=1 Tax=Undibacterium terreum TaxID=1224302 RepID=UPI0016673694)

HSP 1 Score: 176 bits (445), Expect = 8.600e-49
Identity = 101/225 (44.89%), Postives = 134/225 (59.56%), Query Frame = 1
Query:    4 ALNPEVDWHSVEEAYLGNAPVELTYVDNFFSPKALAVLLDMARGSTFFFENK--PNYLGAYPSDGMSHPLLYQIAEEAAERLPSRIVGRGTPGWPLVQSWIYIYGGNDGERCSRGIKVHADNAMVNMNVWLAPDSANLGSAETDDGGGLTVFHAKSPDNWTFRDFNENPSSVRDFLEHNDAGNTSTPHRQNRALLFDSSLFHQSDPFRFKKGFENKRINLTLLFG 672
            ALN + DW ++E AY  NAP  +TY+DNF  P+ALA L      ST +F+ +    Y+G    DG   PLL QIAEE    LPS I G       +   W Y Y   D E    GI VHAD A +N+N WLAPD ANL      +GGGL ++  ++P +W F D+N N   + +FL  + A     PHRQNR +LF+S LFH++D F+FK G+EN+RIN+T+L+G
Sbjct:  285 ALNQDQDWAAIESAYFANAP-GMTYIDNFLKPEALASLRRFCLESTIWFDGRYGDGYVGCTCEDGFICPLLAQIAEEQRLALPS-IFGEHR----ISGLWGYKY---DSELT--GISVHADYAAINVNFWLAPDDANL----DPNGGGLVIWDKEAPLDWNFDDYNNNLPLIAEFLRTSGAKEFVVPHRQNRVVLFNSDLFHKTDSFKFKPGYENRRINVTMLYG 494          
BLAST of mRNA_M-pyrifera_M_contig13551.5996.1 vs. uniprot
Match: UPI001A0C64B8 (Tetratricopeptide repeat protein n=1 Tax=Candidatus Sericytochromatia bacterium TaxID=2762020 RepID=UPI001A0C64B8)

HSP 1 Score: 170 bits (430), Expect = 1.120e-46
Identity = 98/226 (43.36%), Postives = 130/226 (57.52%), Query Frame = 1
Query:    1 QALNPEVDWHSVEEAYLGNAPVELTYVDNFFSPKALAVLLDMARGSTFFFEN-KPN-YLGAYPSDGMSHPLLYQIAEEAAERLPSRIVGRGTPGWPLVQSWIYIYGGNDGERCSRGIKVHADNAMVNMNVWLAPDSANLGSAETDDGGGLTVFHAKSPDNWTFRDFNENPSSVRDFLEHNDAGNTSTPHRQNRALLFDSSLFHQSDPFRFKKGFENKRINLTLLFG 672
            + LNP +DW  +++ YL   P  L  +D+   P A   LL   + S  + ++ +P  YLGAY  DG +  LLYQ+AE   + LP  I G      PL   W Y Y   D E   +GI+VHAD A +N+N W+ PDSAN  + ET   GGL V+HAK+P +W F D+N +      FL    AG T  P+RQNRA+LFDS LFH +D F F   + N RIN+TLL+G
Sbjct:  278 KVLNPALDWARIQQDYLSAEP-GLVVIDDLLQPDATEALLHFCQKSAIWHDDARPGAYLGAYMDDGFNCGLLYQVAEAVQQALPEVIQGA-----PLKHMWAYKY---DSE-AQQGIQVHADGARINLNFWVTPDSANR-NPET---GGLLVYHAKAPADWDFEDYNHDTDRTEAFLAAQQAGVTRVPYRQNRAVLFDSRLFHATDSFDFAPEYLNWRINITLLYG 489          
BLAST of mRNA_M-pyrifera_M_contig13551.5996.1 vs. uniprot
Match: UPI001667A5FA (tetratricopeptide repeat protein n=2 Tax=Undibacterium terreum TaxID=1224302 RepID=UPI001667A5FA)

HSP 1 Score: 169 bits (428), Expect = 1.830e-46
Identity = 96/230 (41.74%), Postives = 132/230 (57.39%), Query Frame = 1
Query:    4 ALNPEVDWHSVEEAYLGNAPVELTYVDNFFSPKALAVLLDMARGSTFFFENKPN--YLGAYPSDGMSHPLLYQIAEEAAERLP-----SRIVGRGTPGWPLVQSWIYIYGGNDGERCSRGIKVHADNAMVNMNVWLAPDSANLGSAETDDGGGLTVFHAKSPDNWTFRDFNENPSSVRDFLEHNDAGNTSTPHRQNRALLFDSSLFHQSDPFRFKKGFENKRINLTLLFG 672
            ALN + DW ++E AY+ NAP  + ++DNF  P+ALA L      ST +FEN+ +  YLG     G   PLL QIAEE    LP     SR+ G           W Y Y     +    GI VHAD A VN+N W+ PDSANL      + GGL V+  ++P +W F D+N N   +  FL+ + A     PH+QNR  +F+S LFH++D + FK+G+EN+RIN+T+L+G
Sbjct:  265 ALNQDQDWAAIEAAYVTNAP-GIIFIDNFLKPEALASLRRFCLESTIWFENRYSNGYLGCVDEQGFGCPLLAQIAEEQRLALPGIFDDSRLTGL----------WGYKY-----DSKMSGISVHADYAAVNVNFWITPDSANL----NPERGGLIVWDKEAPRDWDFSDYNGNAPRIDKFLQESGANPVVIPHKQNRVAIFNSDLFHRTDDYHFKEGYENRRINITMLYG 474          
BLAST of mRNA_M-pyrifera_M_contig13551.5996.1 vs. uniprot
Match: A0A7S1YH78_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YH78_9STRA)

HSP 1 Score: 162 bits (409), Expect = 2.380e-46
Identity = 91/213 (42.72%), Postives = 121/213 (56.81%), Query Frame = 1
Query:   52 GNAPVELTYVDNFFSPKALAVLLDMARGSTFFFENKP-----NYLGAYPSDGMSHPLLYQIAEEAAERLPSRIVGRGTPGWPLVQSWIYIYGGNDGERCSRGIKVHADNAMVNMNVWLAPDSANLGSAETDDGGGLTVFHAKSPDNWTFRDFNENPSSV-RDFLEHNDAGNTSTPHRQNRALLFDSSLFHQSDPFRFKKGFENKRINLTLLFG 672
            G A   +  +D+  SP+AL+ +  +   ST F++ K       Y+GAY  DG+   +L Q+A E  ++LP     R   G PL   W Y Y  +       GI +HAD A VN+N+WL PDSANL      D GGL +F AK P NW F  +N +   V    L      N + PHRQNRA++FDS+LFH +D F+FKKGFEN RINLT+L+G
Sbjct:    5 GYATPGIVVIDDILSPQALSRIRQILLESTVFYQTKMPLRFGGYVGAYIDDGLHDRILLQLAFELHQKLP-----RIMKGHPLKYLWAYKYDSD-----YSGINIHADQAAVNVNLWLTPDSANL----DPDSGGLVIFTAKPPANWNFEKYNTDTEFVVEQLLRPTGFANVTVPHRQNRAVMFDSALFHHTDRFKFKKGFENHRINLTILYG 203          
BLAST of mRNA_M-pyrifera_M_contig13551.5996.1 vs. uniprot
Match: A0A7S1VKH0_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VKH0_9STRA)

HSP 1 Score: 165 bits (418), Expect = 3.400e-46
Identity = 98/237 (41.35%), Postives = 130/237 (54.85%), Query Frame = 1
Query:    1 QALNPEVD-------WHSVEEAYLGNAPVELTYVDNFFSPKALAVLLDMARGSTFFFENKP-----NYLGAYPSDGMSHPLLYQIAEEAAERLPSRIVGRGTPGWPLVQSWIYIYGGNDGERCSRGIKVHADNAMVNMNVWLAPDSANLGSAETDDGGGLTVFHAKSPDNWTFRDFNENPSSV-RDFLEHNDAGNTSTPHRQNRALLFDSSLFHQSDPFRFKKGFENKRINLTLLFG 672
            Q LN ++D       W   EE Y   A   +  +D+  SP+AL+ +  +   ST F++ K       Y+GAY  DG+   +L Q+A E  ++LP     R   G PL   W Y Y  +       GI +HAD A VN+N+WL PDSANL      D GGL +F AK P NW F  +N +   V    L      N + PHRQNRA++FDS+LFH +D F+FKKGFEN RINLT+L+G
Sbjct:  113 QLLNWDLDVDKLQRQWFGEEEGY---ATPGIVVIDDILSPQALSRIRQILLESTVFYQTKMPLRFGGYVGAYIDDGLHDRILLQLAFELHQKLP-----RIMKGHPLKYLWAYKYDSD-----YSGINIHADQAAVNVNLWLTPDSANL----DPDSGGLVIFTAKPPANWNFEKYNTDTEFVVEQLLRPTGFANVTVPHRQNRAVMFDSALFHHTDRFKFKKGFENHRINLTILYG 332          
BLAST of mRNA_M-pyrifera_M_contig13551.5996.1 vs. uniprot
Match: A0A2E7DG36_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7DG36_9PROT)

HSP 1 Score: 169 bits (429), Expect = 4.920e-46
Identity = 94/225 (41.78%), Postives = 130/225 (57.78%), Query Frame = 1
Query:    4 ALNPEVDWHSVEEAYLGNAPVELTYVDNFFSPKALAVLLDMARGSTFFFENK-PNYLGAYPSDGMSHPLLYQIAEEAAERLPSRIVGRGTPGWPLVQSWIYIYGGNDGERCSRGIKVHADNAMVNMNVWLAPDSANLGSAETDDGGGLTVFHAKSPDNWTFRDFNENPSS-VRDFLEHNDAGNTSTPHRQNRALLFDSSLFHQSDPFRFKKGFENKRINLTLLFG 672
            ALNPE+DW  ++  YL + P  +  VD+F  P AL  L      ST +FE K   YLGAY  +G + PLL ++AE+    LP  + G      PL   W Y Y     E+  +GI  HAD A VN+N W+ PD ANL   ET   GGL ++   +P +WTF ++N  P + + + L          PHRQNRA++FDS LFH++D   F++GFEN+R+N+T+LFG
Sbjct:  348 ALNPELDWSGLQSDYLADDP-RIIVVDDFLRPDALVALRRFCLRSTMWFELKGAGYLGAYFREGFNDPLLIRVAEDLVHFLPGILAGH-----PLRMMWAYTY-----EQSMQGINPHADFARVNVNFWITPDEANL-DPET---GGLLIYRRPAPKDWTFDEYNAAPRARIMEHLGEEATRPIRIPHRQNRAVIFDSRLFHETDNLSFRQGFENRRLNVTMLFG 557          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13551.5996.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LAR2_9PHAE1.640e-10868.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5E2_ECTSI2.440e-10368.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI00164B99223.000e-5246.22hypothetical protein n=1 Tax=Undibacterium hunanen... [more]
UPI0019A93A481.090e-4944.89Uncharacterized protein n=1 Tax=Undibacterium terr... [more]
UPI00166736948.600e-4944.89tetratricopeptide repeat protein n=1 Tax=Undibacte... [more]
UPI001A0C64B81.120e-4643.36Tetratricopeptide repeat protein n=1 Tax=Candidatu... [more]
UPI001667A5FA1.830e-4641.74tetratricopeptide repeat protein n=2 Tax=Undibacte... [more]
A0A7S1YH78_9STRA2.380e-4642.72Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S1VKH0_9STRA3.400e-4641.35Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A2E7DG36_9PROT4.920e-4641.78Uncharacterized protein n=1 Tax=Rhodospirillaceae ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13551contigM-pyrifera_M_contig13551:4819..8553 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score333.6
Seed ortholog evalue7.3e-89
Seed eggNOG ortholog2880.D7G5E2
Hectar predicted targeting categoryother localisation
EggNOG OGs2CY2I@1,2S1H1@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size672
Cds size672
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13551.5996.1prot_M-pyrifera_M_contig13551.5996.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig13551 4819..8553 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815820.1747413-CDS-M-pyrifera_M_contig13551:4818..48591622815820.1747413-CDS-M-pyrifera_M_contig13551:4818..4859Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13551 4819..4859 -
1692277587.606537-CDS-M-pyrifera_M_contig13551:4818..48591692277587.606537-CDS-M-pyrifera_M_contig13551:4818..4859Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13551 4819..4859 -
1622815820.1881304-CDS-M-pyrifera_M_contig13551:5468..56301622815820.1881304-CDS-M-pyrifera_M_contig13551:5468..5630Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13551 5469..5630 -
1692277587.6183708-CDS-M-pyrifera_M_contig13551:5468..56301692277587.6183708-CDS-M-pyrifera_M_contig13551:5468..5630Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13551 5469..5630 -
1622815820.1983984-CDS-M-pyrifera_M_contig13551:6532..66531622815820.1983984-CDS-M-pyrifera_M_contig13551:6532..6653Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13551 6533..6653 -
1692277587.6285734-CDS-M-pyrifera_M_contig13551:6532..66531692277587.6285734-CDS-M-pyrifera_M_contig13551:6532..6653Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13551 6533..6653 -
1622815820.2101438-CDS-M-pyrifera_M_contig13551:7298..73981622815820.2101438-CDS-M-pyrifera_M_contig13551:7298..7398Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13551 7299..7398 -
1692277587.6445346-CDS-M-pyrifera_M_contig13551:7298..73981692277587.6445346-CDS-M-pyrifera_M_contig13551:7298..7398Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13551 7299..7398 -
1622815820.221237-CDS-M-pyrifera_M_contig13551:7968..80581622815820.221237-CDS-M-pyrifera_M_contig13551:7968..8058Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13551 7969..8058 -
1692277587.6585603-CDS-M-pyrifera_M_contig13551:7968..80581692277587.6585603-CDS-M-pyrifera_M_contig13551:7968..8058Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13551 7969..8058 -
1622815820.2343097-CDS-M-pyrifera_M_contig13551:8395..85531622815820.2343097-CDS-M-pyrifera_M_contig13551:8395..8553Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13551 8396..8553 -
1692277587.6716201-CDS-M-pyrifera_M_contig13551:8395..85531692277587.6716201-CDS-M-pyrifera_M_contig13551:8395..8553Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13551 8396..8553 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig13551.5996.1

>prot_M-pyrifera_M_contig13551.5996.1 ID=prot_M-pyrifera_M_contig13551.5996.1|Name=mRNA_M-pyrifera_M_contig13551.5996.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=224bp
QALNPEVDWHSVEEAYLGNAPVELTYVDNFFSPKALAVLLDMARGSTFFF
ENKPNYLGAYPSDGMSHPLLYQIAEEAAERLPSRIVGRGTPGWPLVQSWI
YIYGGNDGERCSRGIKVHADNAMVNMNVWLAPDSANLGSAETDDGGGLTV
FHAKSPDNWTFRDFNENPSSVRDFLEHNDAGNTSTPHRQNRALLFDSSLF
HQSDPFRFKKGFENKRINLTLLFG
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mRNA from alignment at M-pyrifera_M_contig13551:4819..8553-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig13551.5996.1 ID=mRNA_M-pyrifera_M_contig13551.5996.1|Name=mRNA_M-pyrifera_M_contig13551.5996.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3735bp|location=Sequence derived from alignment at M-pyrifera_M_contig13551:4819..8553- (Macrocystis pyrifera P11B4 male)
CAGGCGCTGAATCCGGAAGTGGACTGGCATTCCGTGGAGGAGGCTTATCT CGGCAATGCCCCGGTAGAGCTTACGTACGTCGACAACTTCTTTTCTCCCA AGGCGTTAGCGGTGCTGCTAGACATGGCCCGTGGGTCCACCTTCTTCTTC GAAAATAAGTGAGTAGGGTTTCTTGACGAGTCTCGAGTGGGTTCGTTGGT CGATTGGTCGCGGGGGTTCAGCAACGGTTTTGTCTCCTCGTATAAAAACA AATATCTATCAACATCATAGCTTAACTCCGAAGGCAGATGATGACGGGGA CGCTGTTTTGTTTTCGTGGATGTTTGTCACAATTCCGTGGTTAAGTATCG ATGTTTCAATTGAGCATACCCGGCCGATAGTCGTGTTTATGAGCGCACAT CAGGAGAGTTCGGATTCGACAGTGTGGCTATTGCCGTTGCTAACCTGGCG ACAGCTTCATCGTCGTCTTGTTTTCGCCGCACGCGCGCAAGGAAGGCCAA ACTATCTCGGGGCGTACCCAAGTGACGGCATGAGCCACCCTCTCCTGTAC CAGATAGCAGAAGAGGCAGCGGAACGCCTGCCAAGGTGAGGACGACGAGT CTGTTGGATTCACTGTCGCGCAGCATGACTTTCCTGGTGGTCCTGTCAAA GTCACCTAGAGTATTTTCATGGCTTGAGCAACAAGCACAAAGCTCAGTTA ACGAGCTCTCGGATGCAGAAACCATTGGAAATCGTGTAAAAATACGCAAG TCAGTCTATGGCCGCTATTTAGTCGAATCACGCTTGATTCCGTGTCACAC ACCAACAAGAACAGCAGTTTTAAACCTGTTCGGAAGCATCTTGTTGAAGT GACGCGTATATACGTACTTCGTTTACAAAATTATTTGGGTCGGCCTCGAT CCGCCGTGATGTCCCACAATCCCGACCTGTAGATCGCAAGCGTACACCTT TGAGCAATTTAGTTTTTTCCCGCGTCTCGAGGATTTTCGATGACCGCCCG CCATTTGCTCATGACTTGCTTTGCCAACCAACCAAACAATCTGTTTTTCA CTGCGAGTATTTAAAAGTTGATACGCCGAACACTTGCAGCCGGCTCGCGG TAAACGCACCGACCACCATTGCCTATCCCTTGGGACGGCGTTTTTTTTTC CGGAGCAGGATCGTGGGACGCGGCACCCCAGGCTGGCCGCTCGTGCAGTC TTGGATCTATATCTACGGAGGCAACGACGGGGAGCGGTGTTCTCGTGGAA TCAAGGTGCAGCAGGATTTCCGCGACCCACCCGCCTGCTTTATATCTCGC CCGCCGCTAGTCGCTGCAACCTTTTGCCGTATGTGGTGGTACTGTCCAAA ATTCCGTAGGTTGGCATTGCCCCGAGCTCCCACAACCTGCCCTGTCACGG TGTAGTAAGCTGTACCTGGTAGCTCATGGTGCACAGCCTTGGCGAGAGCG AAGGCAAATGCTGCGGGAGCCTTAGCCACGCCCTGAACTTTCGTCGGATA CTGCCTCCAACGTCTGGAAGGGAAGCGGCAATAAGTTGCCAAGCACGTGG TGCATGCTTTGAGACCCGACTTGGCCTACATACAAGGTTTGCAACCGCTG AGACGTGGCAGCCGGAAACGCCGATCTTAAGGTGTGCCCTCGTTCGAGCA AAAACGCTAAAATTTTCGATCCTTCGCGAGTGGCGTGGGTACGGAAAACA TGACGGGTACATCCTTCGATTTCAAGCAATGAAATGCCCCCCTGCCAGCC CCACTCTTTCCCTCGCCGTAGAGAGCGCATCGTCTCGACCGAATCACGGC CATCCCTTCACGGGTACCACGTGCTTTGCGTTTACAACTCACGTATGACG TGTCCCAACCCTGCAAACAACCGGGCGTCGTGTGTGCCTTGCGTCTAAAG GTGCACGCCGACAACGCAATGGTGAACATGAACGTGTGGCTTGCCCCCGA CTCGGCCAACCTGGGCAGCGCCGAGACGGACGACGGAGGCGGACTGACGG TTTTTCACGCCAAATCTCCAGGTCAAGCAAAAAAATCGAACGAGCGTTTG GAGCAACTGAGAGTAAAAATACGAATGCCGTCCTACAGTAGTGGAAGGAA CAACCGCCGACCTGGTATTTGTGCAGAAAAAAAAACTGTGTCCACGCAGA AGCGCCGGAAAAAAAAAATGACCCGCCGCAGAATATGTTTTCGCTAGACA AGGGGGGGGACTAAAACCAAGTTAAAATCAACGAAAATAAACAATTAAAA AGTCCTTGTTTCATCTTGTGATCACAACGGTTACAACGGTTTTCCGTTCC GACCTATGGGGGTGTGGTGTGTTGTTTGTTTCTTTTTTTTTCGCGAGGCG CCCCTGGTTCACGCCGCCAGTGTTTTCTCTGGGGTTTCGACATACCGAAC TCTATGTTTAAGCCCACTGCTGTGCGATACGCGCTCTCGTAGCAGTCCAT TATTTATGGTATACACGCTACAACACGCCCCAAATCATAGGAGCAGTTAG CATACATAAGTATATATATAATCCAAACGGCCCTTACAGTTCGGTTCATT TAGTGGTATTTTGTTGGGGTGTGCAGTTCTAAACGGAATAGGGTGCCGTG TTCCGACGTGTGACCTGCCTCCTTTTCTCCAATTTGTTTTCATCGTTTTT CGGTCGCCACCCCGTCTTCCATACTGTGTGCCCTGTAGGCGAATTGGCAT GAATTATTTAGTTTATTGCCCGTTGTGGATTAGTGTGGTGATTCCCCTGG ATGCTACCCGTGTCAACAGGACAATGTTCCATGCCCATGCTGCGCACTGG TACTATATAACCCGAACAGAGGAAAAGCTTCAGATAAAATATAAACTGAA TTCACTGGGAATACGTACAAAACATATTGATACATGTACTAACCTGGTAT GTTCTCTTCTCTCGCCTGTTCAGACAACTGGACCTTTCGGGACTTTAACG AAAACCCGAGCAGCGTGAGGGACTTCTTGGAACACAACGACGCGGGCAAC ACCTCCACTCCCCACAGGCAAAACAGAGCTCTTCTGTTCGACTCCTCGCT GTTCCACCAGAGCGACCCCTTCCGCTTCAAGAAGGGTGGGGGGAGGCGTT CTACGATAGAGGTCCTCCCTTTTTATTCTGAGGCTCCTCACTTGACCTTA AGGAGCTAAATACCTCACACGAAAACTGACTTCAGCAAAAATCAATTTGC ATCCCATTGAATAATCCCATGGCCCAAGTAGAAAAGAACGTCATTTTTCG AAACAAGATTGGCATTCCGACGATTTTGGGTTAAGAAACCCCGTCATTCA GAAAAAAAATAGCGGAAATGTGCTACCTCTATCGTAGAACGCGTCGGTGC GGTATGCTACTAGCACCGGCTGGCGATCGAATAATGCTGCCGCACTGCTG TTCTGTTGTATTATACACCCGTCTGAGAGAGAGAAAGCTGCACGGTGATG ACTATGATAGTGAAATCCCCAGAACAGGACGCTATAGCCTTATACTTCGT ACGTATATATAACGGTTGAAGACCGCGGATGCGTTTTTCTGGCCTCAACC CCGTGACAACCTTTACGCCTATGACTTCAAGAGAAGGAATTGAGCAGAGC GGCCGCTTTCTTGCTCGGGAAAAATCGACGCGCTCGTGGCTCATGCTCCC CCTCATCCTTTTGCGCATTCTCCCGAAGTTTCGCTCGATGCAAGGCTTCG AGAACAAGCGCATTAACCTCACCCTACTGTTCGGT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig13551:4819..8553-

>mRNA_M-pyrifera_M_contig13551.5996.1 ID=mRNA_M-pyrifera_M_contig13551.5996.1|Name=mRNA_M-pyrifera_M_contig13551.5996.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1344bp|location=Sequence derived from alignment at M-pyrifera_M_contig13551:4819..8553- (Macrocystis pyrifera P11B4 male)
CAGGCGCTGAATCCGGAAGTGGACTGGCATTCCGTGGAGGAGGCTTATCT
CGGCAATGCCCCGGTAGAGCTTACGTACGTCGACAACTTCTTTTCTCCCA
AGGCGTTAGCGGTGCTGCTAGACATGGCCCGTGGGTCCACCTTCTTCTTC
GAAAATAACAGGCGCTGAATCCGGAAGTGGACTGGCATTCCGTGGAGGAG
GCTTATCTCGGCAATGCCCCGGTAGAGCTTACGTACGTCGACAACTTCTT
TTCTCCCAAGGCGTTAGCGGTGCTGCTAGACATGGCCCGTGGGTCCACCT
TCTTCTTCGAAAATAAGCCAAACTATCTCGGGGCGTACCCAAGTGACGGC
ATGAGCCACCCTCTCCTGTACCAGATAGCAGAAGAGGCAGCGGAACGCCT
GCCAAGGCCAAACTATCTCGGGGCGTACCCAAGTGACGGCATGAGCCACC
CTCTCCTGTACCAGATAGCAGAAGAGGCAGCGGAACGCCTGCCAAGCAGG
ATCGTGGGACGCGGCACCCCAGGCTGGCCGCTCGTGCAGTCTTGGATCTA
TATCTACGGAGGCAACGACGGGGAGCGGTGTTCTCGTGGAATCAAGCAGG
ATCGTGGGACGCGGCACCCCAGGCTGGCCGCTCGTGCAGTCTTGGATCTA
TATCTACGGAGGCAACGACGGGGAGCGGTGTTCTCGTGGAATCAAGGTGC
ACGCCGACAACGCAATGGTGAACATGAACGTGTGGCTTGCCCCCGACTCG
GCCAACCTGGGCAGCGCCGAGACGGACGACGGAGGCGGACTGACGGTTTT
TCACGCCAAATCTCCAGGTGCACGCCGACAACGCAATGGTGAACATGAAC
GTGTGGCTTGCCCCCGACTCGGCCAACCTGGGCAGCGCCGAGACGGACGA
CGGAGGCGGACTGACGGTTTTTCACGCCAAATCTCCAGACAACTGGACCT
TTCGGGACTTTAACGAAAACCCGAGCAGCGTGAGGGACTTCTTGGAACAC
AACGACGCGGGCAACACCTCCACTCCCCACAGGCAAAACAGAGCTCTTCT
GTTCGACTCCTCGCTGTTCCACCAGAGCGACCCCTTCCGCTTCAAGAAGG
ACAACTGGACCTTTCGGGACTTTAACGAAAACCCGAGCAGCGTGAGGGAC
TTCTTGGAACACAACGACGCGGGCAACACCTCCACTCCCCACAGGCAAAA
CAGAGCTCTTCTGTTCGACTCCTCGCTGTTCCACCAGAGCGACCCCTTCC
GCTTCAAGAAGGGCTTCGAGAACAAGCGCATTAACCTCACCCTACTGTTC
GGTGCTTCGAGAACAAGCGCATTAACCTCACCCTACTGTTCGGT
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