mRNA_M-pyrifera_M_contig13551.5996.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13551.5996.1 vs. uniprot
Match: A0A6H5LAR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAR2_9PHAE) HSP 1 Score: 329 bits (844), Expect = 1.640e-108 Identity = 153/224 (68.30%), Postives = 181/224 (80.80%), Query Frame = 1
Query: 1 QALNPEVDWHSVEEAYLGNAPVELTYVDNFFSPKALAVLLDMARGSTFFFENKPNYLGAYPSDGMSHPLLYQIAEEAAERLPSRIVGRGTPGWPLVQSWIYIYGGNDGERCSRGIKVHADNAMVNMNVWLAPDSANLGSAETDDGGGLTVFHAKSPDNWTFRDFNENPSSVRDFLEHNDAGNTSTPHRQNRALLFDSSLFHQSDPFRFKKGFENKRINLTLLFG 672
+ALNP VDW++VEEAYL N V++ ++D FFS KALA LLD+A GS+ F + + NYLGAYP +GMSHPLLYQIAEEAA RLP RI+GR TPGWPL Q+W YIYGGNDGERC RGI+VHAD A +N+N+WL DSANLGS ETDDGGGLTVFHAK P +W F++FN++P +++ FLE NDAGNTS P+RQNRAL+FDS LFHQSDPFRFKKG L FG
Sbjct: 247 EALNPNVDWNAVEEAYLVNGAVKIVHIDGFFSQKALAALLDIAHGSSIFVDVRENYLGAYPGEGMSHPLLYQIAEEAAVRLP-RILGRDTPGWPLAQTWFYIYGGNDGERCMRGIRVHADTAEINLNIWLTDDSANLGSVETDDGGGLTVFHAKPPGDWGFQEFNQDPDAIQAFLEANDAGNTSVPYRQNRALMFDSMLFHQSDPFRFKKGILRLATKLLTCFG 469
BLAST of mRNA_M-pyrifera_M_contig13551.5996.1 vs. uniprot
Match: D7G5E2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E2_ECTSI) HSP 1 Score: 333 bits (854), Expect = 2.440e-103 Identity = 154/224 (68.75%), Postives = 181/224 (80.80%), Query Frame = 1
Query: 1 QALNPEVDWHSVEEAYLGNAPVELTYVDNFFSPKALAVLLDMARGSTFFFENKPNYLGAYPSDGMSHPLLYQIAEEAAERLPSRIVGRGTPGWPLVQSWIYIYGGNDGERCSRGIKVHADNAMVNMNVWLAPDSANLGSAETDDGGGLTVFHAKSPDNWTFRDFNENPSSVRDFLEHNDAGNTSTPHRQNRALLFDSSLFHQSDPFRFKKGFENKRINLTLLFG 672
+ALNP VDW++VEEAYLGN PVE+ ++D FFS KALA LLD+A GS+ F + + NYLGAY +GMSHPLLYQIAEE A RLP RI+GR TPGWPL Q+W YIYGGNDGERC+RGI+VHAD A +N+N+WL DSANLGS ETDDGGGLTVFHAK P +W F++FN+ P +++ FLE NDAGNTS P+RQNRAL+FDS LFHQSDPFRFKKG L FG
Sbjct: 988 EALNPNVDWNAVEEAYLGNGPVEIVHIDGFFSQKALAALLDIAHGSSIFVDVRENYLGAYLGEGMSHPLLYQIAEEVAVRLP-RILGRDTPGWPLAQTWFYIYGGNDGERCTRGIRVHADTAEINLNIWLTDDSANLGSVETDDGGGLTVFHAKPPGDWGFQEFNQEPDAIQAFLEENDAGNTSVPYRQNRALMFDSMLFHQSDPFRFKKGIFRLAARLLTYFG 1210
BLAST of mRNA_M-pyrifera_M_contig13551.5996.1 vs. uniprot
Match: UPI00164B9922 (hypothetical protein n=1 Tax=Undibacterium hunanense TaxID=2762292 RepID=UPI00164B9922) HSP 1 Score: 183 bits (464), Expect = 3.000e-52 Identity = 104/225 (46.22%), Postives = 134/225 (59.56%), Query Frame = 1
Query: 4 ALNPEVDWHSVEEAYLGNAPVELTYVDNFFSPKALAVLLDMARGSTFFFENK--PNYLGAYPSDGMSHPLLYQIAEEAAERLPSRIVGRGTPGWPLVQSWIYIYGGNDGERCSRGIKVHADNAMVNMNVWLAPDSANLGSAETDDGGGLTVFHAKSPDNWTFRDFNENPSSVRDFLEHNDAGNTSTPHRQNRALLFDSSLFHQSDPFRFKKGFENKRINLTLLFG 672
ALN ++DW +VE+AY NAP +TY+DNF P+AL L ST +F+ + Y+G DG PLL QIAEE +P RI G + W Y Y D ER GI +HAD A +N+N WLAPD ANL D GGL ++ ++P NW F D+N N + FL+ A PHRQNRA LF+S LFH++D FRFK G+EN+RIN+T+LFG
Sbjct: 211 ALNSDIDWAAVEDAYFANAP-GMTYIDNFLKPEALTSLRRFCLESTLWFDYQYFGEYVGCTIEDGFVCPLLLQIAEEQKAAMP-RIFGDHR----IHGMWGYKY---DSERT--GISIHADFAAINVNFWLAPDDANL----DPDSGGLVIWDKEAPLNWEFDDYNNNTEKITAFLQETGAKTFVVPHRQNRAALFNSDLFHKTDNFRFKPGYENRRINVTMLFG 420
BLAST of mRNA_M-pyrifera_M_contig13551.5996.1 vs. uniprot
Match: UPI0019A93A48 (Uncharacterized protein n=1 Tax=Undibacterium terreum TaxID=1224302 RepID=UPI0019A93A48) HSP 1 Score: 176 bits (445), Expect = 1.090e-49 Identity = 101/225 (44.89%), Postives = 134/225 (59.56%), Query Frame = 1
Query: 4 ALNPEVDWHSVEEAYLGNAPVELTYVDNFFSPKALAVLLDMARGSTFFFENK--PNYLGAYPSDGMSHPLLYQIAEEAAERLPSRIVGRGTPGWPLVQSWIYIYGGNDGERCSRGIKVHADNAMVNMNVWLAPDSANLGSAETDDGGGLTVFHAKSPDNWTFRDFNENPSSVRDFLEHNDAGNTSTPHRQNRALLFDSSLFHQSDPFRFKKGFENKRINLTLLFG 672
ALN + DW ++E AY NAP +TY+DNF P+ALA L ST +F+ + Y+G DG PLL QIAEE LPS I G + W Y Y D E GI VHAD A +N+N WLAPD ANL +GGGL ++ ++P +W F D+N N + +FL + A PHRQNR +LF+S LFH++D F+FK G+EN+RIN+T+L+G
Sbjct: 185 ALNQDQDWAAIESAYFANAP-GMTYIDNFLKPEALASLRRFCLESTIWFDGRYGDGYVGCTCEDGFICPLLAQIAEEQRLALPS-IFGEHR----ISGLWGYKY---DSELT--GISVHADYAAINVNFWLAPDDANL----DPNGGGLVIWDKEAPLDWNFDDYNNNLPLIAEFLRTSGAKEFVVPHRQNRVVLFNSDLFHKTDSFKFKPGYENRRINVTMLYG 394
BLAST of mRNA_M-pyrifera_M_contig13551.5996.1 vs. uniprot
Match: UPI0016673694 (tetratricopeptide repeat protein n=1 Tax=Undibacterium terreum TaxID=1224302 RepID=UPI0016673694) HSP 1 Score: 176 bits (445), Expect = 8.600e-49 Identity = 101/225 (44.89%), Postives = 134/225 (59.56%), Query Frame = 1
Query: 4 ALNPEVDWHSVEEAYLGNAPVELTYVDNFFSPKALAVLLDMARGSTFFFENK--PNYLGAYPSDGMSHPLLYQIAEEAAERLPSRIVGRGTPGWPLVQSWIYIYGGNDGERCSRGIKVHADNAMVNMNVWLAPDSANLGSAETDDGGGLTVFHAKSPDNWTFRDFNENPSSVRDFLEHNDAGNTSTPHRQNRALLFDSSLFHQSDPFRFKKGFENKRINLTLLFG 672
ALN + DW ++E AY NAP +TY+DNF P+ALA L ST +F+ + Y+G DG PLL QIAEE LPS I G + W Y Y D E GI VHAD A +N+N WLAPD ANL +GGGL ++ ++P +W F D+N N + +FL + A PHRQNR +LF+S LFH++D F+FK G+EN+RIN+T+L+G
Sbjct: 285 ALNQDQDWAAIESAYFANAP-GMTYIDNFLKPEALASLRRFCLESTIWFDGRYGDGYVGCTCEDGFICPLLAQIAEEQRLALPS-IFGEHR----ISGLWGYKY---DSELT--GISVHADYAAINVNFWLAPDDANL----DPNGGGLVIWDKEAPLDWNFDDYNNNLPLIAEFLRTSGAKEFVVPHRQNRVVLFNSDLFHKTDSFKFKPGYENRRINVTMLYG 494
BLAST of mRNA_M-pyrifera_M_contig13551.5996.1 vs. uniprot
Match: UPI001A0C64B8 (Tetratricopeptide repeat protein n=1 Tax=Candidatus Sericytochromatia bacterium TaxID=2762020 RepID=UPI001A0C64B8) HSP 1 Score: 170 bits (430), Expect = 1.120e-46 Identity = 98/226 (43.36%), Postives = 130/226 (57.52%), Query Frame = 1
Query: 1 QALNPEVDWHSVEEAYLGNAPVELTYVDNFFSPKALAVLLDMARGSTFFFEN-KPN-YLGAYPSDGMSHPLLYQIAEEAAERLPSRIVGRGTPGWPLVQSWIYIYGGNDGERCSRGIKVHADNAMVNMNVWLAPDSANLGSAETDDGGGLTVFHAKSPDNWTFRDFNENPSSVRDFLEHNDAGNTSTPHRQNRALLFDSSLFHQSDPFRFKKGFENKRINLTLLFG 672
+ LNP +DW +++ YL P L +D+ P A LL + S + ++ +P YLGAY DG + LLYQ+AE + LP I G PL W Y Y D E +GI+VHAD A +N+N W+ PDSAN + ET GGL V+HAK+P +W F D+N + FL AG T P+RQNRA+LFDS LFH +D F F + N RIN+TLL+G
Sbjct: 278 KVLNPALDWARIQQDYLSAEP-GLVVIDDLLQPDATEALLHFCQKSAIWHDDARPGAYLGAYMDDGFNCGLLYQVAEAVQQALPEVIQGA-----PLKHMWAYKY---DSE-AQQGIQVHADGARINLNFWVTPDSANR-NPET---GGLLVYHAKAPADWDFEDYNHDTDRTEAFLAAQQAGVTRVPYRQNRAVLFDSRLFHATDSFDFAPEYLNWRINITLLYG 489
BLAST of mRNA_M-pyrifera_M_contig13551.5996.1 vs. uniprot
Match: UPI001667A5FA (tetratricopeptide repeat protein n=2 Tax=Undibacterium terreum TaxID=1224302 RepID=UPI001667A5FA) HSP 1 Score: 169 bits (428), Expect = 1.830e-46 Identity = 96/230 (41.74%), Postives = 132/230 (57.39%), Query Frame = 1
Query: 4 ALNPEVDWHSVEEAYLGNAPVELTYVDNFFSPKALAVLLDMARGSTFFFENKPN--YLGAYPSDGMSHPLLYQIAEEAAERLP-----SRIVGRGTPGWPLVQSWIYIYGGNDGERCSRGIKVHADNAMVNMNVWLAPDSANLGSAETDDGGGLTVFHAKSPDNWTFRDFNENPSSVRDFLEHNDAGNTSTPHRQNRALLFDSSLFHQSDPFRFKKGFENKRINLTLLFG 672
ALN + DW ++E AY+ NAP + ++DNF P+ALA L ST +FEN+ + YLG G PLL QIAEE LP SR+ G W Y Y + GI VHAD A VN+N W+ PDSANL + GGL V+ ++P +W F D+N N + FL+ + A PH+QNR +F+S LFH++D + FK+G+EN+RIN+T+L+G
Sbjct: 265 ALNQDQDWAAIEAAYVTNAP-GIIFIDNFLKPEALASLRRFCLESTIWFENRYSNGYLGCVDEQGFGCPLLAQIAEEQRLALPGIFDDSRLTGL----------WGYKY-----DSKMSGISVHADYAAVNVNFWITPDSANL----NPERGGLIVWDKEAPRDWDFSDYNGNAPRIDKFLQESGANPVVIPHKQNRVAIFNSDLFHRTDDYHFKEGYENRRINITMLYG 474
BLAST of mRNA_M-pyrifera_M_contig13551.5996.1 vs. uniprot
Match: A0A7S1YH78_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YH78_9STRA) HSP 1 Score: 162 bits (409), Expect = 2.380e-46 Identity = 91/213 (42.72%), Postives = 121/213 (56.81%), Query Frame = 1
Query: 52 GNAPVELTYVDNFFSPKALAVLLDMARGSTFFFENKP-----NYLGAYPSDGMSHPLLYQIAEEAAERLPSRIVGRGTPGWPLVQSWIYIYGGNDGERCSRGIKVHADNAMVNMNVWLAPDSANLGSAETDDGGGLTVFHAKSPDNWTFRDFNENPSSV-RDFLEHNDAGNTSTPHRQNRALLFDSSLFHQSDPFRFKKGFENKRINLTLLFG 672
G A + +D+ SP+AL+ + + ST F++ K Y+GAY DG+ +L Q+A E ++LP R G PL W Y Y + GI +HAD A VN+N+WL PDSANL D GGL +F AK P NW F +N + V L N + PHRQNRA++FDS+LFH +D F+FKKGFEN RINLT+L+G
Sbjct: 5 GYATPGIVVIDDILSPQALSRIRQILLESTVFYQTKMPLRFGGYVGAYIDDGLHDRILLQLAFELHQKLP-----RIMKGHPLKYLWAYKYDSD-----YSGINIHADQAAVNVNLWLTPDSANL----DPDSGGLVIFTAKPPANWNFEKYNTDTEFVVEQLLRPTGFANVTVPHRQNRAVMFDSALFHHTDRFKFKKGFENHRINLTILYG 203
BLAST of mRNA_M-pyrifera_M_contig13551.5996.1 vs. uniprot
Match: A0A7S1VKH0_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VKH0_9STRA) HSP 1 Score: 165 bits (418), Expect = 3.400e-46 Identity = 98/237 (41.35%), Postives = 130/237 (54.85%), Query Frame = 1
Query: 1 QALNPEVD-------WHSVEEAYLGNAPVELTYVDNFFSPKALAVLLDMARGSTFFFENKP-----NYLGAYPSDGMSHPLLYQIAEEAAERLPSRIVGRGTPGWPLVQSWIYIYGGNDGERCSRGIKVHADNAMVNMNVWLAPDSANLGSAETDDGGGLTVFHAKSPDNWTFRDFNENPSSV-RDFLEHNDAGNTSTPHRQNRALLFDSSLFHQSDPFRFKKGFENKRINLTLLFG 672
Q LN ++D W EE Y A + +D+ SP+AL+ + + ST F++ K Y+GAY DG+ +L Q+A E ++LP R G PL W Y Y + GI +HAD A VN+N+WL PDSANL D GGL +F AK P NW F +N + V L N + PHRQNRA++FDS+LFH +D F+FKKGFEN RINLT+L+G
Sbjct: 113 QLLNWDLDVDKLQRQWFGEEEGY---ATPGIVVIDDILSPQALSRIRQILLESTVFYQTKMPLRFGGYVGAYIDDGLHDRILLQLAFELHQKLP-----RIMKGHPLKYLWAYKYDSD-----YSGINIHADQAAVNVNLWLTPDSANL----DPDSGGLVIFTAKPPANWNFEKYNTDTEFVVEQLLRPTGFANVTVPHRQNRAVMFDSALFHHTDRFKFKKGFENHRINLTILYG 332
BLAST of mRNA_M-pyrifera_M_contig13551.5996.1 vs. uniprot
Match: A0A2E7DG36_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7DG36_9PROT) HSP 1 Score: 169 bits (429), Expect = 4.920e-46 Identity = 94/225 (41.78%), Postives = 130/225 (57.78%), Query Frame = 1
Query: 4 ALNPEVDWHSVEEAYLGNAPVELTYVDNFFSPKALAVLLDMARGSTFFFENK-PNYLGAYPSDGMSHPLLYQIAEEAAERLPSRIVGRGTPGWPLVQSWIYIYGGNDGERCSRGIKVHADNAMVNMNVWLAPDSANLGSAETDDGGGLTVFHAKSPDNWTFRDFNENPSS-VRDFLEHNDAGNTSTPHRQNRALLFDSSLFHQSDPFRFKKGFENKRINLTLLFG 672
ALNPE+DW ++ YL + P + VD+F P AL L ST +FE K YLGAY +G + PLL ++AE+ LP + G PL W Y Y E+ +GI HAD A VN+N W+ PD ANL ET GGL ++ +P +WTF ++N P + + + L PHRQNRA++FDS LFH++D F++GFEN+R+N+T+LFG
Sbjct: 348 ALNPELDWSGLQSDYLADDP-RIIVVDDFLRPDALVALRRFCLRSTMWFELKGAGYLGAYFREGFNDPLLIRVAEDLVHFLPGILAGH-----PLRMMWAYTY-----EQSMQGINPHADFARVNVNFWITPDEANL-DPET---GGLLIYRRPAPKDWTFDEYNAAPRARIMEHLGEEATRPIRIPHRQNRAVIFDSRLFHETDNLSFRQGFENRRLNVTMLFG 557 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13551.5996.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13551.5996.1 >prot_M-pyrifera_M_contig13551.5996.1 ID=prot_M-pyrifera_M_contig13551.5996.1|Name=mRNA_M-pyrifera_M_contig13551.5996.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=224bp QALNPEVDWHSVEEAYLGNAPVELTYVDNFFSPKALAVLLDMARGSTFFFback to top mRNA from alignment at M-pyrifera_M_contig13551:4819..8553- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13551.5996.1 ID=mRNA_M-pyrifera_M_contig13551.5996.1|Name=mRNA_M-pyrifera_M_contig13551.5996.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3735bp|location=Sequence derived from alignment at M-pyrifera_M_contig13551:4819..8553- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13551:4819..8553- >mRNA_M-pyrifera_M_contig13551.5996.1 ID=mRNA_M-pyrifera_M_contig13551.5996.1|Name=mRNA_M-pyrifera_M_contig13551.5996.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1344bp|location=Sequence derived from alignment at M-pyrifera_M_contig13551:4819..8553- (Macrocystis pyrifera P11B4 male)back to top |