mRNA_M-pyrifera_M_contig13123.5855.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13123.5855.1 vs. uniprot
Match: D8LCC2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCC2_ECTSI) HSP 1 Score: 258 bits (659), Expect = 2.350e-80 Identity = 114/173 (65.90%), Postives = 139/173 (80.35%), Query Frame = 1
Query: 1 GELIFVLFQLLPVDYVRESWWLSEISPWFAGAMLFQSLWCASFRPWARDAGLLWVPTLMLGGVAVALGGVHSRLRNAWFAKDMDVSQYFLAHVPISLHFGWITCASLVNLNGFFASIPRLSDRFKLVASLCTVTAATVVGAVISYSREDPLFEAVLAWALWAVGSPAGWSDLK 519
GE I+V FQL+P+ +R SWWLS+ISPWFAGAMLFQ+LWC SFRPWARD+GLLW+P L+LGG VALGGVH LR AWF DM V QY HVP+SLH GWI+CA+LVNLNG+FA+I +LS+R KL +L +V AA +G I+ REDP++ AV+AWALWAVGSPAGW +L+
Sbjct: 364 GEAIYVAFQLMPLPSIRGSWWLSDISPWFAGAMLFQALWCFSFRPWARDSGLLWLPALLLGGTGVALGGVHRILREAWFTSDMTVLQYLAVHVPLSLHLGWISCATLVNLNGYFATINKLSNRVKLGLALGSVVAAVALGVAITLLREDPIYAAVVAWALWAVGSPAGWDELR 536
BLAST of mRNA_M-pyrifera_M_contig13123.5855.1 vs. uniprot
Match: A0A835Z9R9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9R9_9STRA) HSP 1 Score: 189 bits (480), Expect = 1.310e-56 Identity = 87/175 (49.71%), Postives = 120/175 (68.57%), Query Frame = 1
Query: 1 GELIFVLFQLLPVDYVRESWWLSEISPWFAGAMLFQSLWCASFRPWARDAGL--LWVPTLMLGGVAVALGGVHSRLRNAWFAKDMDVSQYFLAHVPISLHFGWITCASLVNLNGFFASIPRLSDRFKLVASLCTVTAATVVGAVISYSREDPLFEAVLAWALWAVGSPAGWSDLK 519
GEL+FV++Q LP+ VR SWWL+E+SP+F+GAML Q+LWC +FRPWAR AGL W+P L+LG A ALGG H L A ++ Y LA VP++LHFGW+T A+LVN NGF A+ S K A++ ++ A +VGA ++++R DP++ AV+AWAL A+ A W L+
Sbjct: 91 GELLFVIYQALPLARVRTSWWLAELSPYFSGAMLLQTLWCGAFRPWARAAGLNLQWIPALLLGLGAAALGGAHGILVQALEDSELSPLSYALAFVPLALHFGWLTAAALVNANGFVAAAAPRSHAVKASAAIASIYLAVLVGAAVTFARRDPIYAAVIAWALAAIADEAAWGKLR 265
BLAST of mRNA_M-pyrifera_M_contig13123.5855.1 vs. uniprot
Match: D7FS55_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS55_ECTSI) HSP 1 Score: 173 bits (438), Expect = 1.420e-50 Identity = 80/174 (45.98%), Postives = 113/174 (64.94%), Query Frame = 1
Query: 1 GELIFVLFQLLPVDYVRES-WWLSEISPWFAGAMLFQSLWCASFRPWARDAGLLWVPTLMLGGVAVALGGVHSRLRNAWFAKDMDVSQYFLAHVPISLHFGWITCASLVNLNGFFASIPRLSDRFKLVASLCTVTAATVVGAVISYSREDPLFEAVLAWALWAVGSPAGWSDLK 519
GE ++Q LP++ V + WLS++SPW + A L QS WC SFR WARD+GLLW P +LGG A LGG H +R A A +M QY L H+P+SLHFGW++CA+LVN N + + +P SD+ KL SL ++ +A + ++ + DP++ V+AWAL AV S GW+ +K
Sbjct: 106 GEAALAVYQTLPLEGVSAAAGWLSKLSPWLSSAFLVQSCWCLSFREWARDSGLLWFPAALLGGTAACLGGAHHVVRGALAAGEMSNLQYGLVHLPVSLHFGWVSCATLVNFNNYISLLP-FSDKGKLNFSLASIASAVGLAVAVTGTTGDPVYAGVVAWALSAVASEKGWAKMK 278
BLAST of mRNA_M-pyrifera_M_contig13123.5855.1 vs. uniprot
Match: A0A7S2UXB1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXB1_9STRA) HSP 1 Score: 159 bits (401), Expect = 1.200e-44 Identity = 71/173 (41.04%), Postives = 116/173 (67.05%), Query Frame = 1
Query: 1 GELIFVLFQLLPVDYVRESWWLSEISPWFAGAMLFQSLWCASFRPWARDAGLLWVPTLMLGGVAVALGGVHSRLRNAWFAKDMDVSQYFLAHVPISLHFGWITCASLVNLNGFFASIPRLSDRFKLVASLCTVTAATVVGAVISYSREDPLFEAVLAWALWAVGSPAGWSDLK 519
GE +F FQLLP++ V+ S+ + +++ W+ A+ QSLWC++FRPWA+ +G LW+P +L AVALGG H L +A ++++ + +Y + ++P++LHFGWIT ASLV+ NG+ AS+ S K +AS ++ A + A++ ++R +P + V++WAL AV GWS L+
Sbjct: 112 GEALFAFFQLLPIETVQTSF-IPKLTVWWIPAVACQSLWCSAFRPWAKKSGFLWLPAALLTLTAVALGGAHKVLFDALHSEEVSMLEYIIVNIPLTLHFGWITAASLVSWNGYLASVTA-SISIKSLASSASIVAGVIAAALVGWNRIEPFYPLVVSWALAAVADKKGWSQLE 282
BLAST of mRNA_M-pyrifera_M_contig13123.5855.1 vs. uniprot
Match: A0A6V1K7Z9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1K7Z9_HETAK) HSP 1 Score: 133 bits (334), Expect = 3.730e-34 Identity = 66/175 (37.71%), Postives = 102/175 (58.29%), Query Frame = 1
Query: 1 GELIFVLFQLLPVDYVRESWWLSEISPWFAGAMLFQSLWCASFRPWARDAGLLWVPTLMLGGVAVALGGVHSRLRNA--WFAKDMDVSQYFLAHVPISLHFGWITCASLVNLNGFFASIPRLSDRFKLVASLCTVTAATVVGAVISYSREDPLFEAVLAWALWAVGSPAGWSDLK 519
GE IFV +Q LP++Y++ +L+ +SP++ A+ FQS+W RPWA + G W+ +L VAL GVH + + D+++ + +A +P+SLHFGW+ A LV++NG A P L+ R K + S +V ATV+G V++ R DP+ L+WAL + W LK
Sbjct: 154 GETIFVFYQALPINYIKNKDFLAMLSPFWIAAIGFQSIWTFCARPWAVENGYGWIQAALLVLTGVALSGVHKVMTSQPHTLVGDLNILDFIVAQIPLSLHFGWMMAAGLVSVNGVLARTP-LTIRAKHLFSDASVVVATVIGVVVAAKRTDPVVAFALSWALAGLADDKAWEKLK 327
BLAST of mRNA_M-pyrifera_M_contig13123.5855.1 vs. uniprot
Match: A0A7S0WI04_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WI04_9CHLO) HSP 1 Score: 132 bits (331), Expect = 5.620e-34 Identity = 70/176 (39.77%), Postives = 105/176 (59.66%), Query Frame = 1
Query: 4 ELIFVLFQLLPVDYVRESWWLSEISPWFAGAMLFQSLWCASFRPWARDAGLLWVPTLMLGGVAVALGGVHSRLRN------AWFAKDMDVSQYFLAHVPISLHFGWITCASLVNLNGFFASIPR---LSDRFKLVASLCTVTAATVVGAVISYSREDPLFEAVLAWALWAVGSPAG 504
E IF + QLLP + + WL ++SPW+ A ++QSLWCA+FR WAR +G+ W+ +L A+AL G + + +W A V Q LA +P+SLHFGW+T ASLVN N FFA + R +S R ++ + ++ A +VG++++ R D L+ LAWAL A+ + G
Sbjct: 133 ESIFTVVQLLPS--MTDVTWLLDVSPWWVAANIYQSLWCAAFRDWARPSGVFWISAALLTATAIALAGAEAVVTGPSVGTGSWTA----VGQRVLAQMPLSLHFGWVTAASLVNWNSFFAVLYRDAHISLRTQIWLAFASLHLAYIVGSIVAVVRMDFLYSLTLAWALTAIKTDKG 302
BLAST of mRNA_M-pyrifera_M_contig13123.5855.1 vs. uniprot
Match: A0A4D9D883_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D883_9STRA) HSP 1 Score: 126 bits (316), Expect = 2.490e-31 Identity = 67/164 (40.85%), Postives = 95/164 (57.93%), Query Frame = 1
Query: 1 GELIFVLFQLLPVDYVRESW-WLSEISPWFAGAMLFQSLWCASFRPWARDAGLLWVPTLMLGGVAVALGGVHSRLRNAWFAKDMDVSQYFLAHVPISLHFGWITCASLVNLNGFFASIPRLSDRFKLVASLCTVTAATVVGAVISYSREDPLFEAVLAWALWAV 489
GE + +QL +L+ ++P A A QSLWC +FRPW + +VP+ +L AV L VH+ LR A A M Y + H+P+SLHFGWITCA+LVNLNG+FA P L KL +L ++ A +G+ ++ + DP+ V+AWAL+AV
Sbjct: 169 GEFLLTFYQLASSRLAPALQPYLARLAPPLAQAFAAQSLWCVAFRPWVGR--MQFVPSALLAMTAVGLSRVHTVLREAVAAGAMRPWDYLIVHLPLSLHFGWITCATLVNLNGWFAVAPTLRTGDKLGLALASINVAVTLGSQVTLASGDPVIALVVAWALYAV 330
BLAST of mRNA_M-pyrifera_M_contig13123.5855.1 vs. uniprot
Match: A4S135_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S135_OSTLU) HSP 1 Score: 115 bits (288), Expect = 1.910e-28 Identity = 60/144 (41.67%), Postives = 85/144 (59.03%), Query Frame = 1
Query: 73 ISPWFAGAMLFQSLWCASFRPWARDAGLLWVPTLMLGGVAVALGGVHSRLRNAWFAKDMDVSQYFLAHVPISLHFGWITCASLVNLNGFFASIPRLSDRFKLVASLCTVTAATVVGAVISYSREDPLFEAVLAWALWAVGSPAG 504
++P +A A FQ+LWCA+FRPWA+ WV + +L AVALG H LR A A + Y+ HVP+S+HFGWI+CA+LVNLN A + +L + + A +GA ++ + DP++ V+AWAL AV S G
Sbjct: 77 VAPSWALACAFQALWCAAFRPWAKAPRHFWVSSALLVAEAVALGSAHRALRAA--ASAASKAWYWTTHVPLSMHFGWISCAALVNLNSHVAK--TCAPDTQLATAFLSAFGAGGLGAAVTLTTGDPVYALVIAWALTAVASDGG 216
BLAST of mRNA_M-pyrifera_M_contig13123.5855.1 vs. uniprot
Match: A0A7S2LK24_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LK24_9STRA) HSP 1 Score: 113 bits (283), Expect = 4.990e-27 Identity = 68/168 (40.48%), Postives = 93/168 (55.36%), Query Frame = 1
Query: 1 GELIFVLFQLLPVDYVRESWWLSEISPWFAGAMLFQSLWCASFRPWARDAGLLWVPTLMLGGVAVALGGVHSRLRNAWFAK---DMDVSQYFLAHVPISLHFGWITCASLVNLNGFFASIPRLSDRFKL--VASLCTVTAATVVGAVISYSREDPLFEAVLAWALWAV 489
GEL FV+ Q D + + IS F A LFQ+LWCA+FRP L+W+ T MLGGVA L H+ +A + +Y + +PISLHFGW T A+LVNLNG A + L V +V AAT +G I++SR+ P++ V++WAL+AV
Sbjct: 121 GELAFVISQFFVKDKQLLASQIQSISAPFVIAQLFQTLWCAAFRP-KYTGNLMWISTGMLGGVAYYLSKAHAVFTSASSVRMIPGFSWWEYAIHFLPISLHFGWTTAATLVNLNGAVAVADYRTSSNALINVVGHASVVAATALGVAITFSRQAPVYGGVISWALFAV 287
BLAST of mRNA_M-pyrifera_M_contig13123.5855.1 vs. uniprot
Match: A0A7S2UG41_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UG41_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.930e-25 Identity = 68/165 (41.21%), Postives = 88/165 (53.33%), Query Frame = 1
Query: 1 GELIFVLFQLLPVDYVRESWW-LSEISPWFAGAMLFQSLWCASFRPWARDAGLLWVPTLMLGGVAVALGGVHSRLR-NAWFAKDMDVSQYFLAHVPISLHFGWITCASLVNLNGFFASIPRLSDRFKLVASLCTVTAATVVGAVISYSREDPLFEAVLAWALWAV 489
GE+ V Q L +D + L + S F A +FQSLWCASFRP + +++ ML G A +L VH ++ + QY L +P+SLHFGW T ASLVNLNG A P S R TV A+ +GA IS +R P+F V+AWAL AV
Sbjct: 109 GEMAMVASQWLLLDESSPTRAILQKASAPFVVANVFQSLWCASFRPKYKKGYYMYLSWAMLTGTAYSLSKVHETYSYSSSINSGVSFGQYCLYFLPLSLHFGWTTAASLVNLNGAVALNPSASPRVVAWVGHATVIGASALGAAISLTRSAPVFGGVIAWALLAV 273 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13123.5855.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13123.5855.1 >prot_M-pyrifera_M_contig13123.5855.1 ID=prot_M-pyrifera_M_contig13123.5855.1|Name=mRNA_M-pyrifera_M_contig13123.5855.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=180bp GELIFVLFQLLPVDYVRESWWLSEISPWFAGAMLFQSLWCASFRPWARDAback to top mRNA from alignment at M-pyrifera_M_contig13123:5003..8717+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13123.5855.1 ID=mRNA_M-pyrifera_M_contig13123.5855.1|Name=mRNA_M-pyrifera_M_contig13123.5855.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3715bp|location=Sequence derived from alignment at M-pyrifera_M_contig13123:5003..8717+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13123:5003..8717+ >mRNA_M-pyrifera_M_contig13123.5855.1 ID=mRNA_M-pyrifera_M_contig13123.5855.1|Name=mRNA_M-pyrifera_M_contig13123.5855.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1080bp|location=Sequence derived from alignment at M-pyrifera_M_contig13123:5003..8717+ (Macrocystis pyrifera P11B4 male)back to top |