mRNA_M-pyrifera_M_contig128642.5751.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig128642.5751.1 vs. uniprot
Match: A0A1E3PIU9_9ASCO (Dolichyldiphosphatase n=1 Tax=Nadsonia fulvescens var. elongata DSM 6958 TaxID=857566 RepID=A0A1E3PIU9_9ASCO) HSP 1 Score: 69.3 bits (168), Expect = 8.340e-12 Identity = 45/120 (37.50%), Postives = 66/120 (55.00%), Query Frame = 1
Query: 1 GNPSNHAQFMGYAATWVVLWLLVAGGRHWSTFEKFGVSLVAVLGGMS--VCASRVLLEYHYLHQVVLGWVLGVGVGLGWTWIDRRLLHPYIFPALSSLSLFRYLNFRDLSAPPPSTGKKE 354
G PS HAQF+ Y AT++ LW+L ++S K V+ V L G+S V SRV L YH QV++G+VLG+ + +GW + L I L S+ R+L +D +A S ++E
Sbjct: 106 GMPSAHAQFVSYYATFITLWILFRVRYNFSFTRK--VTRVGSLIGLSLVVAYSRVYLHYHSGAQVLIGYVLGIVLAIGWFIVVCLLRDLGIIDLLLDTSIARWLYIKDTAAEKSSFVREE 223
BLAST of mRNA_M-pyrifera_M_contig128642.5751.1 vs. uniprot
Match: PDF1_SCHPO (Palmitoyl-protein thioesterase-dolichyl pyrophosphate phosphatase fusion 1 n=1 Tax=Schizosaccharomyces pombe (strain 972 / ATCC 24843) TaxID=284812 RepID=PDF1_SCHPO) HSP 1 Score: 67.8 bits (164), Expect = 8.780e-11 Identity = 34/106 (32.08%), Postives = 57/106 (53.77%), Query Frame = 1
Query: 1 GNPSNHAQFMGYAATWVVLWLLVAGGRHWSTFEKFGVSLVAVLGGMSVCASRVLLEYHYLHQVVLGWVLGVGVGLGWTWIDRRLLHPYIFPALSSLSLFRYLNFRD 318
G PS+H+QFMG+ + +++ W + F + + VC+SR LL++HYL QVV G+++G GVGL W ++ +L + L SL ++ +D
Sbjct: 492 GMPSSHSQFMGFFSAYMIAWDYKYRRSQCFSMLSFAKYAIYLTLSTFVCSSRYLLDFHYLTQVVYGYMIGFGVGLFWVYLVGKLRSLGVTKWLLSLPPLQFFYIKD 597
BLAST of mRNA_M-pyrifera_M_contig128642.5751.1 vs. uniprot
Match: A0A6P8H9C4_ACTTE (Dolichyldiphosphatase n=2 Tax=Actiniaria TaxID=6103 RepID=A0A6P8H9C4_ACTTE) HSP 1 Score: 65.9 bits (159), Expect = 2.060e-10 Identity = 39/120 (32.50%), Postives = 63/120 (52.50%), Query Frame = 1
Query: 1 GNPSNHAQFMGYAATWVVLWLLVAGGRHWST---------FEKFGVSLVAVLGGMSVCASRVLLEYHYLHQVVLGWVLGVGVGLGWTWIDRRLLHPYIFPALSSLSLFRYLNFRDLSAPP 333
G PSNH+QFMG+ A ++VL++ ST K V+ +L ++V SRV L YH ++Q+ G V+G +G+ W + +L P +FP +++ + YL RD + P
Sbjct: 113 GMPSNHSQFMGFFAVYMVLFIYCRLHYSQSTTMWDDLLDNLWKHAVATGTILLSLAVAFSRVYLRYHDINQISAGLVIGGAMGVAWFIFTQTVLTP-LFPVITAWPVAEYLMIRDSTLIP 231
BLAST of mRNA_M-pyrifera_M_contig128642.5751.1 vs. uniprot
Match: A0A1V8SKB0_9PEZI (Dolichyldiphosphatase n=4 Tax=Rachicladosporium TaxID=470018 RepID=A0A1V8SKB0_9PEZI) HSP 1 Score: 65.1 bits (157), Expect = 2.900e-10 Identity = 43/121 (35.54%), Postives = 59/121 (48.76%), Query Frame = 1
Query: 1 GNPSNHAQFMGYAATWVVLWLLVAGGRHWSTFEK------FGVS--------LVAVLGGMSVCASRVLLEYHYLHQVVLGWVLGVGVGLGWTWIDRRLLHPYIFPALSSLSLFRYLNFRDL 321
G PS+HAQFM Y A ++ LW++V RH EK G++ L A + +V ASRV L YHY HQV +G+ LG L W + + + L L ++L RDL
Sbjct: 89 GMPSSHAQFMAYWAVYLGLWVVV---RHRPALEKRREGGYVGIAVWQRGVLGLAAFVLSAAVGASRVELNYHYPHQVYVGFALGTACALAWFVVTAGARYYGLLDWLLELPPMQWLRMRDL 206
BLAST of mRNA_M-pyrifera_M_contig128642.5751.1 vs. uniprot
Match: A7RWC1_NEMVE (Dolichyldiphosphatase n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RWC1_NEMVE) HSP 1 Score: 65.1 bits (157), Expect = 3.950e-10 Identity = 38/120 (31.67%), Postives = 64/120 (53.33%), Query Frame = 1
Query: 1 GNPSNHAQFMGYAATWVVLWLLVAGGRHWST---------FEKFGVSLVAVLGGMSVCASRVLLEYHYLHQVVLGWVLGVGVGLGWTWIDRRLLHPYIFPALSSLSLFRYLNFRDLSAPP 333
G PS+H+QFMG+ A ++VL++ ST K V+L ++ ++V SRV L YH ++QV G ++G +G+ W + +L P +FP +++ + YL RD + P
Sbjct: 113 GMPSDHSQFMGFFAVYMVLFIYCRLHYSQSTTMWDDLLDNLWKHAVALGSIALSLAVAFSRVYLRYHDINQVAAGLLIGGAMGVAWFMFTQTVLTP-LFPVITAWPVAEYLMIRDSTLIP 231
BLAST of mRNA_M-pyrifera_M_contig128642.5751.1 vs. uniprot
Match: A0A5A8DJ10_CAFRO (Multifunctional fusion protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DJ10_CAFRO) HSP 1 Score: 65.9 bits (159), Expect = 4.170e-10 Identity = 40/108 (37.04%), Postives = 60/108 (55.56%), Query Frame = 1
Query: 1 GNPSNHAQFMGYAATWVVLWLLVAGGRHWSTFEKFGVSLVAVLGGMSVCASRVLLEYHYLHQVVLGWVLGVGVGLGWTWIDRRLLHPYIFPALSSLSLFRYLNFRDLS 324
G PS+HAQFM +AA +V+L+ + G+ + + G L AV +V SRV L YH Q+++G ++G G+ W + LL P F A++ L R+L RD S
Sbjct: 99 GMPSDHAQFMFFAAAYVLLFASLRWGQP--LYARAGWCLAAVCFAAAVALSRVYLMYHTPEQILVGALVGSVAGVAWFAVTEALLQPS-FRAVAETPLARWLLVRDCS 203
BLAST of mRNA_M-pyrifera_M_contig128642.5751.1 vs. uniprot
Match: A0A484DVE3_BRELC (Dolichyldiphosphatase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DVE3_BRELC) HSP 1 Score: 63.5 bits (153), Expect = 1.010e-9 Identity = 41/113 (36.28%), Postives = 62/113 (54.87%), Query Frame = 1
Query: 1 GNPSNHAQFMGYAATWVVLWLL--VAGGRH---WSTFEKFGVSLVAVLGGMSVCASRVLLEYHYLHQVVLGWVLGVGVGLGWTWIDRRLLHPYIFPALSSLSLFRYLNFRDLS 324
G PS H+QFMG+ AT+ V++ + RH W T GV +AVL C SR+ L+YH + QVV+G G+ +G+ W + R + P +FP ++ R+ RD+S
Sbjct: 88 GMPSAHSQFMGFFATYSVVYTAKRLNERRHLEQWITI--CGVIFMAVL----TCYSRIHLKYHSIDQVVVGAFFGILIGIFWYALVAR-ISPKLFPLVTETRFARFFYMRDIS 193
BLAST of mRNA_M-pyrifera_M_contig128642.5751.1 vs. uniprot
Match: A0A482R6Q2_9ARCH (Phosphatase PAP2 family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482R6Q2_9ARCH) HSP 1 Score: 61.6 bits (148), Expect = 2.190e-9 Identity = 34/108 (31.48%), Postives = 54/108 (50.00%), Query Frame = 1
Query: 1 GNPSNHAQFMGYAATWVVLWLLVAGGRHWSTFEKFGVSLVAVL--GGMSVCASRVLLEYHYLHQVVLGWVLGVGVGLGWTWIDRRLLHPYIFPALSSLSLFRYLNFRD 318
G PSNHAQFMG+AA ++ LW + W + +L+ + +V SRV L YH + QV++G+ +G W + + P F +++ + R L RD
Sbjct: 26 GMPSNHAQFMGFAAVYISLWAC----KRWRVTARAKAALIVAVQAAAAAVMVSRVYLVYHSVEQVLVGYAVGAAAACTWFALVETVARPR-FRTVAASAWARALRLRD 128
BLAST of mRNA_M-pyrifera_M_contig128642.5751.1 vs. uniprot
Match: S3BRB4_OPHP1 (Dolichyldiphosphatase n=1 Tax=Ophiostoma piceae (strain UAMH 11346) TaxID=1262450 RepID=S3BRB4_OPHP1) HSP 1 Score: 60.8 bits (146), Expect = 1.750e-8 Identity = 42/136 (30.88%), Postives = 60/136 (44.12%), Query Frame = 1
Query: 1 GNPSNHAQFMGYAATWVVLWLLVAGGRHWSTF----------------------------EKFGVSLVAVLGGMSVCASRVLLEYHYLHQVVLGWVLGVGVGLGWTWIDRRLLHPYIFPALSSLSLFRYLNFRDLS 324
G PS+HAQF GY A + L+LLV + +T ++ G+S+VA + + SRV L YH QV +G+V G+ VG GW + + SL L +YL RDL+
Sbjct: 136 GMPSSHAQFAGYWALTIALFLLVRYQKTQNTXXXXXXXXXXGAKKTTSSAATRRDTLTLTQRVGISVVAFVVAFLIAGSRVYLHYHTPKQVTVGFVAGLVVGAGWFAATAVVRQLGLLDWALSLPLAQYLRLRDLA 271
BLAST of mRNA_M-pyrifera_M_contig128642.5751.1 vs. uniprot
Match: F0X971_GROCL (Dynein heavy chain, cytoplasmic n=1 Tax=Grosmannia clavigera (strain kw1407 / UAMH 11150) TaxID=655863 RepID=F0X971_GROCL) HSP 1 Score: 60.1 bits (144), Expect = 4.800e-8 Identity = 43/129 (33.33%), Postives = 61/129 (47.29%), Query Frame = 1
Query: 1 GNPSNHAQFMGYAATWVVLWLLV----------------AGGRHWSTFEKFGVSLVAVLGGMSVCASRVLLEYHYLHQVVLGWVLGVGVGLGW----TWIDRRLLHPYIFPALSSLSLFRYLNFRDLSA 327
G PS+HAQF GY A + L+LLV + WS E+ S A + + V SRV L YH QV++G+ G+ VG W T++ R L ++ +L R+L RDL+A
Sbjct: 4578 GMPSSHAQFAGYWAVTIALFLLVRYRGQNRIPQNRQRQESPQNSWSLAERVATSTAAFVVAVLVAWSRVYLHYHTPRQVLVGFAAGLLVGFAWFAATTFVRRCGLLRWVL----ALPPARWLRIRDLAA 4702 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128642.5751.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig128642.5751.1 >prot_M-pyrifera_M_contig128642.5751.1 ID=prot_M-pyrifera_M_contig128642.5751.1|Name=mRNA_M-pyrifera_M_contig128642.5751.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=111bp MGYAATWVVLWLLVAGGRHWSTFEKFGVSLVAVLGGMSVCASRVLLEYHYback to top mRNA from alignment at M-pyrifera_M_contig128642:127..486- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig128642.5751.1 ID=mRNA_M-pyrifera_M_contig128642.5751.1|Name=mRNA_M-pyrifera_M_contig128642.5751.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=360bp|location=Sequence derived from alignment at M-pyrifera_M_contig128642:127..486- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig128642:127..486- >mRNA_M-pyrifera_M_contig128642.5751.1 ID=mRNA_M-pyrifera_M_contig128642.5751.1|Name=mRNA_M-pyrifera_M_contig128642.5751.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=666bp|location=Sequence derived from alignment at M-pyrifera_M_contig128642:127..486- (Macrocystis pyrifera P11B4 male)back to top |