mRNA_M-pyrifera_M_contig128588.5742.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig128588.5742.1 vs. uniprot
Match: A0A7S4MIW0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MIW0_9EUKA) HSP 1 Score: 158 bits (400), Expect = 5.870e-42 Identity = 80/153 (52.29%), Postives = 109/153 (71.24%), Query Frame = 1
Query: 7 LDNVVTCSPTDTLEHTITKSLAAKIHRVWVVDADNKPLGVVTLSDMMNVLRGLDEDLHSRQLAVYGRQAMRQLTVSNILISGMNGLGAEITKNVILAGVRGVTLHDTAKTTIGDLGSHFYLREEDVGKNRALACLKKMRELNPSVKVEAHDGE 465
++ +TC +DTL +++ + + VWVV+ + P+ VTLSD++N ++G++EDL SR LAVYGR AM++L + +LISG+NGLGAEI KNVILA V VTLHD+ T+ DL SHFYL E DVGKNRA +CL ++ ELNPSV+V E
Sbjct: 250 VEKPLTCVRSDTLGDIMSRLVDTHHNHVWVVNGETLPVSSVTLSDIVNRMQGINEDLQSRALAVYGRGAMKKLFATKVLISGLNGLGAEIAKNVILANVNSVTLHDSNNTSFADLNSHFYLSESDVGKNRAESCLAQLAELNPSVRVTTCTAE 402
BLAST of mRNA_M-pyrifera_M_contig128588.5742.1 vs. uniprot
Match: A0A843WZ79_COLES (ThiF domain-containing protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843WZ79_COLES) HSP 1 Score: 132 bits (331), Expect = 6.850e-36 Identity = 64/103 (62.14%), Postives = 83/103 (80.58%), Query Frame = 1
Query: 163 LDEDLHSRQLAVYGRQAMRQLTVSNILISGMNGLGAEITKNVILAGVRGVTLHDTAKTTIGDLGSHFYLREEDVGKNRALACLKKMRELNPSVKVEAHDGELN 471
+DEDLHSRQLAVYGR+ MR+L SN+LISG+NGLGAEI KN++LAGV+ VTLHD + DL S+F+L EEDVGKNRALAC++K++ELN +V + +L+
Sbjct: 74 IDEDLHSRQLAVYGRETMRRLFASNVLISGINGLGAEIAKNLVLAGVKSVTLHDDEAVDLWDLSSNFFLSEEDVGKNRALACVQKLQELNNAVLISTLTTKLS 176
BLAST of mRNA_M-pyrifera_M_contig128588.5742.1 vs. uniprot
Match: A0A6J5XVR8_PRUAR (ThiF domain-containing protein n=1 Tax=Prunus armeniaca TaxID=36596 RepID=A0A6J5XVR8_PRUAR) HSP 1 Score: 127 bits (320), Expect = 4.110e-35 Identity = 61/102 (59.80%), Postives = 80/102 (78.43%), Query Frame = 1
Query: 163 LDEDLHSRQLAVYGRQAMRQLTVSNILISGMNGLGAEITKNVILAGVRGVTLHDTAKTTIGDLGSHFYLREEDVGKNRALACLKKMRELNPSVKVEAHDGEL 468
+DEDLHSRQLAVYGR+ MR+L SNIL+SG+ GLGAEI KN++LAGV+ VTLHD + DL S+F+ E+D+GKNRALAC++K++ELN +V + EL
Sbjct: 11 IDEDLHSRQLAVYGRETMRRLFASNILVSGLQGLGAEIAKNLVLAGVKSVTLHDDGVVELWDLSSNFFFSEDDIGKNRALACVQKLQELNNAVIISTLTTEL 112
BLAST of mRNA_M-pyrifera_M_contig128588.5742.1 vs. uniprot
Match: A0A0L0DMQ1_THETB (Ubiquitin-activating enzyme E1 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DMQ1_THETB) HSP 1 Score: 137 bits (344), Expect = 2.020e-34 Identity = 69/102 (67.65%), Postives = 82/102 (80.39%), Query Frame = 1
Query: 163 LDEDLHSRQLAVYGRQAMRQLTVSNILISGMNGLGAEITKNVILAGVRGVTLHDTAKTTIGDLGSHFYLREEDVGKNRALACLKKMRELNPSVKVEAHDGEL 468
+DEDL SRQLAVYGR+AM +L S +LI+GM+GLGAEI KNVILA V VTLHDTA+ I DLG+HFYL+EEDVGKNRA ACL +++ELNPSV A +L
Sbjct: 22 IDEDLQSRQLAVYGREAMMRLAKSKVLITGMDGLGAEIAKNVILANVGSVTLHDTAEVAIADLGAHFYLKEEDVGKNRAEACLGELQELNPSVMTVASQRDL 123
BLAST of mRNA_M-pyrifera_M_contig128588.5742.1 vs. uniprot
Match: A0A2C9WIK8_MANES (ThiF domain-containing protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9WIK8_MANES) HSP 1 Score: 128 bits (322), Expect = 2.540e-34 Identity = 70/133 (52.63%), Postives = 92/133 (69.17%), Query Frame = 1
Query: 49 HTITKSLAAKIHRVWVVDADNKPLGVVTLSDMMNVLRGLDEDLHSRQLAVYGRQAMRQLTVSNILISGMNGLGAEITKNVILAGVRGVTLHDTAKTTIGDLGSHFYLREEDVGKNRALACLKKMRELNPSVKV 447
H IT + + I+ VV + N+ G++ N L +DEDLHSRQLAVYGR+ MR+L SN+L+SGM GLGAEI KN+ILAGV+ +TLHD + DL S+F E DVGKNRALA ++K++ELN +V V
Sbjct: 43 HAITSATSTTINNCSVVGS-NRSSGLIMAPGDAN-LSDIDEDLHSRQLAVYGRETMRRLFASNVLVSGMQGLGAEIAKNLILAGVKSITLHDEQTVELWDLSSNFIFSENDVGKNRALASVQKLQELNNAVVV 173
BLAST of mRNA_M-pyrifera_M_contig128588.5742.1 vs. uniprot
Match: A0A835XLJ1_9CHLO (UBA_e1_C domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XLJ1_9CHLO) HSP 1 Score: 136 bits (342), Expect = 3.720e-34 Identity = 66/103 (64.08%), Postives = 84/103 (81.55%), Query Frame = 1
Query: 163 LDEDLHSRQLAVYGRQAMRQLTVSNILISGMNGLGAEITKNVILAGVRGVTLHDTAKTTIGDLGSHFYLREEDVGKNRALACLKKMRELNPSVKVEAHDGELN 471
+DE+LHSRQLAVYGR+AM+++ S++LI GMNGLG E+ KNVILAGV+ VT+HDTAK T+ DL + FYL E+DVGKNRA AC +K++ELN SV V A G L+
Sbjct: 16 IDENLHSRQLAVYGREAMKRMAKSSVLICGMNGLGVEVAKNVILAGVQAVTVHDTAKVTVQDLSAQFYLTEQDVGKNRAEACREKLQELNTSVAVAAASGPLS 118
BLAST of mRNA_M-pyrifera_M_contig128588.5742.1 vs. uniprot
Match: A8J1C1_CHLRE (Ubiquitin-activating enzyme E1 n=3 Tax=Chlamydomonas TaxID=3052 RepID=A8J1C1_CHLRE) HSP 1 Score: 135 bits (341), Expect = 5.070e-34 Identity = 65/102 (63.73%), Postives = 82/102 (80.39%), Query Frame = 1
Query: 163 LDEDLHSRQLAVYGRQAMRQLTVSNILISGMNGLGAEITKNVILAGVRGVTLHDTAKTTIGDLGSHFYLREEDVGKNRALACLKKMRELNPSVKVEAHDGEL 468
+DE+LHSRQLAVYGR+AM+++ S++LI G NGLG E+ KNVILAGVRGVT+HDTAK + DL + FYL E+DVG+NRA AC +K++ELN V V A GEL
Sbjct: 36 IDENLHSRQLAVYGREAMKRMATSSVLICGANGLGVEVAKNVILAGVRGVTVHDTAKVALTDLSAQFYLTEQDVGRNRAEACREKLQELNTGVAVHAASGEL 137
BLAST of mRNA_M-pyrifera_M_contig128588.5742.1 vs. uniprot
Match: UPI000C6CF6C6 (ubiquitin-like modifier-activating enzyme 1 isoform X1 n=3 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6CF6C6) HSP 1 Score: 126 bits (316), Expect = 1.210e-33 Identity = 62/102 (60.78%), Postives = 75/102 (73.53%), Query Frame = 1
Query: 163 LDEDLHSRQLAVYGRQAMRQLTVSNILISGMNGLGAEITKNVILAGVRGVTLHDTAKTTIGDLGSHFYLREEDVGKNRALACLKKMRELNPSVKVEAHDGEL 468
+D+ L+SRQL V G +AMR++ S+ILISGMNGLG EI+KNVIL GV+ VT+HDT + DL S +YL EEDVGKNRA C K+ ELNP V V H GEL
Sbjct: 50 IDDSLYSRQLYVLGHEAMRRMATSDILISGMNGLGLEISKNVILGGVKSVTIHDTKNCELSDLSSQYYLTEEDVGKNRAEVCRSKLAELNPYVSVSLHTGEL 151
BLAST of mRNA_M-pyrifera_M_contig128588.5742.1 vs. uniprot
Match: A0A843UDN8_COLES (E1 ubiquitin-activating enzyme n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843UDN8_COLES) HSP 1 Score: 134 bits (338), Expect = 1.290e-33 Identity = 64/103 (62.14%), Postives = 83/103 (80.58%), Query Frame = 1
Query: 163 LDEDLHSRQLAVYGRQAMRQLTVSNILISGMNGLGAEITKNVILAGVRGVTLHDTAKTTIGDLGSHFYLREEDVGKNRALACLKKMRELNPSVKVEAHDGELN 471
+DEDLHSRQLAVYGR+ MR+L SN+LISGMNGLGAEI KN++LAGV+ VTLHD + DL S+F+ E+DVGKNRALAC++K++ELN +V + H +L+
Sbjct: 122 IDEDLHSRQLAVYGRETMRRLFASNVLISGMNGLGAEIAKNLVLAGVKSVTLHDDGAVDMWDLSSNFFFSEDDVGKNRALACVQKLQELNNTVIISTHTTKLS 224
BLAST of mRNA_M-pyrifera_M_contig128588.5742.1 vs. uniprot
Match: A0A0D9XN80_9ORYZ (ThiF domain-containing protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9XN80_9ORYZ) HSP 1 Score: 127 bits (320), Expect = 1.600e-33 Identity = 60/103 (58.25%), Postives = 83/103 (80.58%), Query Frame = 1
Query: 163 LDEDLHSRQLAVYGRQAMRQLTVSNILISGMNGLGAEITKNVILAGVRGVTLHDTAKTTIGDLGSHFYLREEDVGKNRALACLKKMRELNPSVKVEAHDGELN 471
+DEDLHSRQLAVYGR+ M++L SN+L+SG+NGLGAEI KN++LAGV+ VTLHD + DL S+F+L E+DVG+NRA AC++K++ELN +V + G+L+
Sbjct: 102 IDEDLHSRQLAVYGRETMKRLFGSNVLVSGLNGLGAEIAKNLVLAGVKSVTLHDDNNVDLWDLSSNFFLSEKDVGQNRAQACIQKLQELNNAVIISTITGDLS 204 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128588.5742.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig128588.5742.1 >prot_M-pyrifera_M_contig128588.5742.1 ID=prot_M-pyrifera_M_contig128588.5742.1|Name=mRNA_M-pyrifera_M_contig128588.5742.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=157bp RKLDNVVTCSPTDTLEHTITKSLAAKIHRVWVVDADNKPLGVVTLSDMMNback to top mRNA from alignment at M-pyrifera_M_contig128588:11..481+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig128588.5742.1 ID=mRNA_M-pyrifera_M_contig128588.5742.1|Name=mRNA_M-pyrifera_M_contig128588.5742.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=471bp|location=Sequence derived from alignment at M-pyrifera_M_contig128588:11..481+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig128588:11..481+ >mRNA_M-pyrifera_M_contig128588.5742.1 ID=mRNA_M-pyrifera_M_contig128588.5742.1|Name=mRNA_M-pyrifera_M_contig128588.5742.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=942bp|location=Sequence derived from alignment at M-pyrifera_M_contig128588:11..481+ (Macrocystis pyrifera P11B4 male)back to top |