mRNA_M-pyrifera_M_contig128201.5668.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig128201.5668.1 vs. uniprot
Match: A0A7Y5W6N5_9BACT (Metal ABC transporter permease n=1 Tax=Pirellulales bacterium TaxID=2715253 RepID=A0A7Y5W6N5_9BACT) HSP 1 Score: 133 bits (334), Expect = 9.290e-34 Identity = 73/158 (46.20%), Postives = 104/158 (65.82%), Query Frame = 1
Query: 1 GIVIHWWQQRQLRRDVGRVDLLRASFELTEHAV-SDPTPTPEKMVAYEINFGDLISMRAWEPTVLRRLIVAAVQEDLLHPTGNDTWSLTESGAEEARRIARNHRLWEMYLMQYAHIAPSHVDRDADLIEHVLDPELIAELEHQLDQ--AEDEVPASSH 465
G+++ + R+ RR VGR DLLRA +E E +V +D +P + A + F L++ R+W +RRL+ AA +E L+ + + LT GA +ARR+ RNHRLWEMYL+ YA +A SH+DRDAD IE+VLDP+L+AELE L + A+ +PAS H
Sbjct: 313 GVLVQAFALRRSRRRVGRHDLLRAMYENVESSVETDGSPEGLDLTAQPVAFDRLLATRSWSAARVRRLLAAAQREGLVTGNASSGYRLTARGAADARRVVRNHRLWEMYLITYADVATSHIDRDADEIEYVLDPDLVAELETALSRRRADLAMPASPH 470
BLAST of mRNA_M-pyrifera_M_contig128201.5668.1 vs. uniprot
Match: A0A349K4S5_9BACT (Iron ABC transporter (Fragment) n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A349K4S5_9BACT) HSP 1 Score: 127 bits (319), Expect = 1.480e-33 Identity = 72/157 (45.86%), Postives = 95/157 (60.51%), Query Frame = 1
Query: 1 GIVIHWWQQRQLRRDVGRVDLLRASFELTEHAVSDPTPTPEKMVAYEINFGDLISMRAWEPTVLRRLIVAAVQEDLLHPTGNDTWSLTESGAEEARRIARNHRLWEMYLMQYAHIAPSHVDRDADLIEHVLDPELIAELEHQLDQAED--EVPASSH 465
G+V W+Q +LRR VGR LLRA++E+ E D E + I L++ R+W + RL+ A ED L G L+E+G EA R+ RNHRLWE+YL++YA IAPSHVDRDADL+EHVLD E++ +LE +L EVP S H
Sbjct: 67 GVVPRSWRQARLRRKVGRQHLLRAAYEILEGQQPD---VAEPIRNLPIALDSLMTHRSWSAQQINRLLRTARNEDHLEEAGPGQVRLSEAGFGEAARVTRNHRLWELYLIRYADIAPSHVDRDADLVEHVLDAEVVDQLESELQDRPSSLEVPPSPH 220
BLAST of mRNA_M-pyrifera_M_contig128201.5668.1 vs. uniprot
Match: A0A518C010_9BACT (Manganese transport system membrane protein MntB n=1 Tax=Mucisphaera calidilacus TaxID=2527982 RepID=A0A518C010_9BACT) HSP 1 Score: 129 bits (323), Expect = 2.720e-32 Identity = 72/166 (43.37%), Postives = 102/166 (61.45%), Query Frame = 1
Query: 1 GIVIHWWQQRQLRRDVGRVDLLRASFELTE---HAVSDPTP-TPEKMVAYEINFGDLISMRAWEPTVLRRLIVAAVQEDLLHPTGNDTWSLTESGAEEARRIARNHRLWEMYLMQYAHIAPSHVDRDADLIEHVLDPELIAELEHQLDQAED--EVPASSHTTSGG 480
G++ W + +L+R +GR LLRA+FEL E H S P TP + DL++ R+W P LR I A ED + L+E+G EA RI RNHRLWE++L+++A IAPSHVDRDAD++EHVLDP+++ +LE +L+ A+ +VP S H + G
Sbjct: 298 GVLTRWLRHHRLQRKIGRQHLLRAAFELLEARRHPESSHIPNTP-------VRIADLLARRSWTPGKLRGFIRTARAEDHIESVDGRQLRLSEAGFGEAARITRNHRLWELFLIRHADIAPSHVDRDADMVEHVLDPDIVRQLEAELEAADHTLDVPPSPHRLTPG 456
BLAST of mRNA_M-pyrifera_M_contig128201.5668.1 vs. uniprot
Match: A0A858RPL9_9BACT (Iron chelate uptake ABC transporter family permease subunit n=1 Tax=Luteolibacter luteus TaxID=2728835 RepID=A0A858RPL9_9BACT) HSP 1 Score: 127 bits (318), Expect = 1.120e-31 Identity = 72/156 (46.15%), Postives = 98/156 (62.82%), Query Frame = 1
Query: 1 GIVIHWWQQRQLRRDVGRVDLLRASFELTEHAVSDPTPTPEKMVAYEINFGDLISMRAWEPTVLRRLIVAAVQEDLLH-PTGNDTWSLTESGAEEARRIARNHRLWEMYLMQYAHIAPSHVDRDADLIEHVLDPELIAELEHQLDQAEDEVPASSH 465
G++ W QR+L+R VGR LLRA++E+ E P P ++ +L+ R+W P L R + A +ED L PT L+ESG EA RI RNHRLWE+YL+++A IAPSHVDRDADL+EH+L E++ ELE +L + +VPAS H
Sbjct: 291 GVLPRWLDQRRLQRRVGRQHLLRAAYEILESRSRPPVNDP-------VSRTELLEHRSWTPHQLARELSHARKEDHLEAPTDRSMIHLSESGFGEAARITRNHRLWELYLIRHADIAPSHVDRDADLVEHILGSEMVRELETEL-ASRTQVPASPH 438
BLAST of mRNA_M-pyrifera_M_contig128201.5668.1 vs. uniprot
Match: A0A7V9J383_9BACT (Metal ABC transporter permease n=1 Tax=Chthoniobacterales bacterium TaxID=2201154 RepID=A0A7V9J383_9BACT) HSP 1 Score: 119 bits (299), Expect = 6.470e-31 Identity = 68/155 (43.87%), Postives = 96/155 (61.94%), Query Frame = 1
Query: 1 GIVIHWWQQRQLRRDVGRVDLLRASFELTEHAVSDPTPTPEKMVAYEINFGDLISMRAWEPTVLRRLIVAAVQEDLLHPTGNDTWSLTESGAEEARRIARNHRLWEMYLMQYAHIAPSHVDRDADLIEHVLDPELIAELEHQLDQAEDEVPASSH 465
G+V Q L+R VGR LLRA++EL E P K VA ++ +++ R+W P R+++ A ED + + DT L+ESG EA R+ RNHRLWE+YL+++A IAPSHVDRDAD++EH+L EL+ +LE +L E +P S H
Sbjct: 55 GVVPRLRDQAHLKRRVGRQHLLRAAYELAERQSE-----PVKNVA--VSRQAMLAHRSWSPREFRKILERAKDEDHIEASSADTIHLSESGFGEAARVTRNHRLWELYLIRHADIAPSHVDRDADMVEHILGAELVRKLEAELGD-EGTLPRSPH 201
BLAST of mRNA_M-pyrifera_M_contig128201.5668.1 vs. uniprot
Match: A0A2E5QT46_9BACT (Iron ABC transporter n=5 Tax=Bacteria TaxID=2 RepID=A0A2E5QT46_9BACT) HSP 1 Score: 124 bits (312), Expect = 1.340e-30 Identity = 71/157 (45.22%), Postives = 93/157 (59.24%), Query Frame = 1
Query: 1 GIVIHWWQQRQLRRDVGRVDLLRASFELTEHAVSDPTPTPEKMVAYEINFGDLISMRAWEPTVLRRLIVAAVQEDLLHPTGNDTWSLTESGAEEARRIARNHRLWEMYLMQYAHIAPSHVDRDADLIEHVLDPELIAELEHQLDQAED--EVPASSH 465
G++ W+Q +LRR VGR LLRA++E+ E D E + I L + R+W + RL+ A ED L G L+E+G EA R+ RNHRLWE+YL+ YA IAPSHVDRDADL+EHVLD E++ +LE +L EVP S H
Sbjct: 322 GVIPRSWRQARLRRKVGRQHLLRAAYEILEGQQPD---VAEPIRNLPIALDSLRTHRSWSAQQINRLLRTARAEDHLEEAGPGQVRLSEAGFGEAARVTRNHRLWELYLIHYADIAPSHVDRDADLVEHVLDAEVVHQLESELQDRPSSLEVPPSPH 475
BLAST of mRNA_M-pyrifera_M_contig128201.5668.1 vs. uniprot
Match: A0A517QIS4_9PLAN (Manganese transport system membrane protein MntB n=1 Tax=Thalassoglobus polymorphus TaxID=2527994 RepID=A0A517QIS4_9PLAN) HSP 1 Score: 124 bits (311), Expect = 1.830e-30 Identity = 68/150 (45.33%), Postives = 89/150 (59.33%), Query Frame = 1
Query: 1 GIVIHWWQQRQLRRDVGRVDLLRASFELTEHAVSDPTPTPEKMVAYEINFGDLISMRAWEPTVLRRLIVAAVQEDLLHPTGNDTWSLTESGAEEARRIARNHRLWEMYLMQYAHIAPSHVDRDADLIEHVLDPELIAELEHQLDQAEDEV 450
G++ W +Q++L+ VG DLLRA +E+TE + T +++ I+ +L+ MR W P LR L A L+ N L GA ARR AR+HRLWE YL+QYA IAPSHVDRDAD IEH+LD E+I LE L A +V
Sbjct: 319 GVLWKWIEQKRLQSRVGERDLLRAVYEITEGRIDHRQLTDPVLLSQRISQAELLQMRTWSPARLRSLTRQAASRHLVLIRANGEIQLAPDGAALARRAARDHRLWEQYLIQYADIAPSHVDRDADQIEHILDAEVIRGLEESLASAGHDV 468
BLAST of mRNA_M-pyrifera_M_contig128201.5668.1 vs. uniprot
Match: A0A7W1HMF2_9BACT (Metal ABC transporter permease n=1 Tax=Chthoniobacterales bacterium TaxID=2201154 RepID=A0A7W1HMF2_9BACT) HSP 1 Score: 121 bits (304), Expect = 3.770e-30 Identity = 66/155 (42.58%), Postives = 93/155 (60.00%), Query Frame = 1
Query: 1 GIVIHWWQQRQLRRDVGRVDLLRASFELTEHAVSDPTPTPEKMVAYEINFGDLISMRAWEPTVLRRLIVAAVQEDLLHPTGNDTWSLTESGAEEARRIARNHRLWEMYLMQYAHIAPSHVDRDADLIEHVLDPELIAELEHQLDQAEDEVPASSH 465
G++ W Q +L+R VGR LLRA++EL E P A +++ R+W P R+++ A ED + + DT L+ESG EA R+ RNHRLWE+YL+++A IAPSHVDRDAD++EH+L EL+ +LE +L E P S H
Sbjct: 215 GVIPRWRDQARLKRRVGRQHLLRAAYELAERQTDPVKNVPVSRQA-------MLAHRSWSPRQFRKILARARGEDHIEASSADTIHLSESGFGEAVRVTRNHRLWELYLIRHADIAPSHVDRDADMVEHILGAELVRKLEAELGD-EGTHPRSPH 361
BLAST of mRNA_M-pyrifera_M_contig128201.5668.1 vs. uniprot
Match: A0A4V0XMZ0_9BACT (Manganese ABC transporter permease n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A4V0XMZ0_9BACT) HSP 1 Score: 121 bits (303), Expect = 2.090e-29 Identity = 69/156 (44.23%), Postives = 89/156 (57.05%), Query Frame = 1
Query: 1 GIVIHWWQQRQLRRDVGRVDLLRASFELTEHAVSDPTPTPEKMVAYEINFGDLISMRAWEPTVLRRLIVAAVQEDLLHPTGNDTWSLTESGAEEARRIARNHRLWEMYLMQYAHIAPSHVDRDADLIEHVLDPELIAELEHQLD-QAEDEVPASSH 465
G+ W QRQ + +GR DLLRA +EL E + T E + +EI+ +L MR W L+ AV+E LL D + LT GAEEAR R HRLWE+YL+ + P VDR AD IEHVLDP+ +AELE +LD ++ VP S H
Sbjct: 300 GLFPRWRSQRQFEQRIGRSDLLRACYELLEPILGANETTQESLTKFEIDELELSGMRQWPAGRFHGLVSTAVREGLLVSMSTDGYQLTSRGAEEARDAVRRHRLWEIYLLTQTDLDPRLVDRGADGIEHVLDPDQLAELERRLDNESPHGVPPSPH 455
BLAST of mRNA_M-pyrifera_M_contig128201.5668.1 vs. uniprot
Match: UPI001987C992 (Metal ABC transporter permease n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=UPI001987C992) HSP 1 Score: 121 bits (304), Expect = 2.140e-29 Identity = 69/156 (44.23%), Postives = 89/156 (57.05%), Query Frame = 1
Query: 1 GIVIHWWQQRQLRRDVGRVDLLRASFELTEHAVSDPTPTPEKMVAYEINFGDLISMRAWEPTVLRRLIVAAVQEDLLHPTGNDTWSLTESGAEEARRIARNHRLWEMYLMQYAHIAPSHVDRDADLIEHVLDPELIAELEHQL-DQAEDEVPASSH 465
G+ W QRQ R +GR DLLRA +EL E + T E + YEI+ +L +MR W L+ AV+E LL T + LT+ GAEE+R R HRLWE+YL+ + P VDR AD IEHVLDP+ +A+LE QL Q +P S H
Sbjct: 337 GLWPRWRSQRQFERRIGRSDLLRACYELLEPILGPDQTTQESLTKYEIDDLELSAMRQWPTGHFHGLVSTAVRESLLVETSAGGYQLTQRGAEESRDAVRRHRLWEIYLLTQTDLDPRLVDRGADGIEHVLDPQQLADLERQLVTQLPQGIPPSPH 492 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128201.5668.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig128201.5668.1 >prot_M-pyrifera_M_contig128201.5668.1 ID=prot_M-pyrifera_M_contig128201.5668.1|Name=mRNA_M-pyrifera_M_contig128201.5668.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=162bp GIVIHWWQQRQLRRDVGRVDLLRASFELTEHAVSDPTPTPEKMVAYEINFback to top mRNA from alignment at M-pyrifera_M_contig128201:16..501- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig128201.5668.1 ID=mRNA_M-pyrifera_M_contig128201.5668.1|Name=mRNA_M-pyrifera_M_contig128201.5668.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=486bp|location=Sequence derived from alignment at M-pyrifera_M_contig128201:16..501- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig128201:16..501- >mRNA_M-pyrifera_M_contig128201.5668.1 ID=mRNA_M-pyrifera_M_contig128201.5668.1|Name=mRNA_M-pyrifera_M_contig128201.5668.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=972bp|location=Sequence derived from alignment at M-pyrifera_M_contig128201:16..501- (Macrocystis pyrifera P11B4 male)back to top |