mRNA_M-pyrifera_M_contig128115.5650.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig128115.5650.1 vs. uniprot
Match: A0A351EPL9_9ACTN (AB hydrolase-1 domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A351EPL9_9ACTN) HSP 1 Score: 159 bits (402), Expect = 5.880e-46 Identity = 85/166 (51.20%), Postives = 104/166 (62.65%), Query Frame = 1
Query: 1 GRPFWYEGRAGLELSQLARTTVPLGPGRDRRVVIVTGFLAGASTADPLSRWLRSAGYRVELAPTGRNLLGSGEMVDRVTQTLQSADGEPSILIGHSRGGQQSRVAAYRDPGLVSHLITLGAPVRAHLPRSAPLRVPVETIRLLDKMPFGPSEDGAASTRYEADLFA 498
GRP W E RA E ++L + + L P + R+V+VTG+LAGAS+A L WL SAGY V +A GRN S R+ + L D +PSILIGHSRGGQQ RVA+ R P VS LITLGAPVR HLPR LR +E +R+L + PFGP D YE DL +
Sbjct: 15 GRPVWNEARAPGERARLNASAIRLDPVANERIVLVTGYLAGASSASALQPWLLSAGYDVCVADVGRNAASSTHAAGRIAEALMDGD-KPSILIGHSRGGQQCRVASQRHPSRVSQLITLGAPVRMHLPRQIVLRSSIEALRVLARFPFGPQADPEGDAVYENDLLS 179
BLAST of mRNA_M-pyrifera_M_contig128115.5650.1 vs. uniprot
Match: A0A7Y2GKV7_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GKV7_9ACTN) HSP 1 Score: 127 bits (320), Expect = 1.940e-33 Identity = 73/172 (42.44%), Postives = 97/172 (56.40%), Query Frame = 1
Query: 1 GRPFWYEGRAGLELSQLARTTVPLGP----GRDRRVVIVTGFLAGASTADPLSRWLRSAGYRVELAPTGRNLLGSGEMVDRVTQTL---QSADGEPSILIGHSRGGQQSRVAAYRDPGLVSHLITLGAPVRAHLPRSAPLRVPVETIRLLDKMPFGPSEDGAASTRYEADLF 495
GRP W E RA +E L R+TV GR R VV+VTG+L + L+ WL GY V +A RN S R+ +T+ A G P LIGHSRGGQQ RV A R P ++ LITLG+P+R HLPR LR+ +E +RL ++ G ++D A Y+++LF
Sbjct: 22 GRPVWNELRAPVERKNLRRSTVWADAEGLDGRGRPVVVVTGYLGTPDSVADLTDWLERGGYAVTVADMERNRRSSTWAAQRIAETIAERSEAVGRPVTLIGHSRGGQQCRVVANRSPEGLAQLITLGSPIRRHLPRQIALRLSIEALRLASRLGIGAADDVDADRAYQSELF 193
BLAST of mRNA_M-pyrifera_M_contig128115.5650.1 vs. uniprot
Match: UPI001BDC385C (hypothetical protein n=1 Tax=Nonomuraea sp. H16431 TaxID=2835864 RepID=UPI001BDC385C) HSP 1 Score: 77.4 bits (189), Expect = 3.490e-14 Identity = 52/127 (40.94%), Postives = 66/127 (51.97%), Query Frame = 1
Query: 25 RAGLELSQLARTTVPLGPGRDRRVVIVTGFLAGASTADPLSRWLRSAGYRVELAPTGRNLLGSGEMVDRVTQTLQSAD---GEPSILIGHSRGGQQSRVAAYRDPGLVSHLITLGAP----VRAHLP 384
R L+L+ + P G VV+V G + +P+ RWL AG R +AP L V RV +TL A G P+ +I HSRGGQ +RVAA R P LVS L+TLG+P V AH P
Sbjct: 17 RDWLDLADVPEYVTPPFHGDGLPVVLVGGLASTPMLFEPMRRWLDRAGCRPVVAPVRYGLDCGERTVARVLRTLAEATDRAGRPAAIIAHSRGGQFARVAAVRQPELVSGLVTLGSPLTDLVAAHRP 143
BLAST of mRNA_M-pyrifera_M_contig128115.5650.1 vs. uniprot
Match: A0A0Q6FHN6_9ACTN (Uncharacterized protein n=4 Tax=Marmoricola TaxID=86795 RepID=A0A0Q6FHN6_9ACTN) HSP 1 Score: 67.8 bits (164), Expect = 1.620e-10 Identity = 47/127 (37.01%), Postives = 67/127 (52.76%), Query Frame = 1
Query: 19 EGRAGLELSQLA---RTTVPLGPGRDRRVVIVTGFLAGASTADPLSRWLRSAGYRVELAPTGRNLLGSGEMVDRVTQTLQSAD---GEPSILIGHSRGGQQSRVAAYRDPGLVSHLITLGAPVRAHL 381
EG GLEL+ A R L G V+++ GFLAGAS+ L +LRS GYRV GRN+ + R+++ L G+P ++G S GG +R A +P V +IT+G P+R +L
Sbjct: 43 EGLTGLELAHSAASRRYLAGLPSGDGHPVLVLPGFLAGASSTGFLRGFLRSKGYRVYDWGQGRNMGVRQGLRGRLSERLDHISQRTGQPMSIVGWSAGGIYAREIARENPDRVRSVITMGTPMRGNL 169
BLAST of mRNA_M-pyrifera_M_contig128115.5650.1 vs. uniprot
Match: A0A0F9ETL7_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9ETL7_9ZZZZ) HSP 1 Score: 60.8 bits (146), Expect = 5.690e-8 Identity = 46/131 (35.11%), Postives = 64/131 (48.85%), Query Frame = 1
Query: 7 PF-WYEGRAGLELSQLARTTVPLGPGRDRR----VVIVTGFLAGASTADPLSRWLRSAGYRVELAPTGRNLLGSGEMVDRVTQTLQSAD---GEPSILIGHSRGGQQSRVAAYRDPGLVSHLITLGAPVRA 375
PF W E L+ L + V LG G R VV+V GFL + + WL GY + G N ++ R+ +T+Q G P +IGHS GG +R A P +VSH+I+LGAP+R+
Sbjct: 26 PFIWREALWVLDWFSLRLSPVYLGFGVPRGDGSPVVLVPGFLTTDAYLVEMYFWLGRIGYAPYFSGIGINADCVHKLTQRLEKTVQDVHAETGRPVQIIGHSLGGSLARRLALGRPDIVSHIISLGAPIRS 156
BLAST of mRNA_M-pyrifera_M_contig128115.5650.1 vs. uniprot
Match: A0A837D4X9_9PSEU (AB hydrolase-1 domain-containing protein n=2 Tax=Saccharomonospora viridis TaxID=1852 RepID=A0A837D4X9_9PSEU) HSP 1 Score: 57.8 bits (138), Expect = 5.830e-7 Identity = 38/102 (37.25%), Postives = 52/102 (50.98%), Query Frame = 1
Query: 73 GPGRDRRVVIVTGFLAGASTADPLSRWLRSAGYRVELAPTGRNLLGSGEMVDRVTQTLQS---ADGEPSILIGHSRGGQQSRVAAYRDPGLVSHLITLGAPV 369
G G + V++V GF G + L WL + GY TG NL + +V+ + L+ G I+IG SRGG SR+AA R P LV L+ L +PV
Sbjct: 31 GDGTGQGVLLVPGFGFGDWSLRLLRSWLAARGYHPRGTRTGLNLGCTTRLVNHLEHRLEDLARTTGRRVIVIGQSRGGWLSRLAAVRRPDLVRGLVMLASPV 132 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128115.5650.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig128115.5650.1 >prot_M-pyrifera_M_contig128115.5650.1 ID=prot_M-pyrifera_M_contig128115.5650.1|Name=mRNA_M-pyrifera_M_contig128115.5650.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=166bp GRPFWYEGRAGLELSQLARTTVPLGPGRDRRVVIVTGFLAGASTADPLSRback to top mRNA from alignment at M-pyrifera_M_contig128115:2..499+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig128115.5650.1 ID=mRNA_M-pyrifera_M_contig128115.5650.1|Name=mRNA_M-pyrifera_M_contig128115.5650.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=498bp|location=Sequence derived from alignment at M-pyrifera_M_contig128115:2..499+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig128115:2..499+ >mRNA_M-pyrifera_M_contig128115.5650.1 ID=mRNA_M-pyrifera_M_contig128115.5650.1|Name=mRNA_M-pyrifera_M_contig128115.5650.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=996bp|location=Sequence derived from alignment at M-pyrifera_M_contig128115:2..499+ (Macrocystis pyrifera P11B4 male)back to top |